RNA–Protein interactions for RNA: ENST00000588143.5

GRN-211, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 546 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-211ENST00000588143 SCAPERQ9BY12 1400 aa23.5■■□□□ 1.35
GRN-211ENST00000588143 EHBP1L1Q8N3D4 1523 aa23.49■■□□□ 1.35
GRN-211ENST00000588143 KANK4Q5T7N3 995 aaPredicted RBP23.49■■□□□ 1.35
GRN-211ENST00000588143 LRRC9Q6ZRR7 1453 aa23.48■■□□□ 1.35
GRN-211ENST00000588143 ARHGAP5Q13017 1502 aa23.48■■□□□ 1.35
GRN-211ENST00000588143 CFDP1Q9UEE9 299 aaPredicted RBP23.47■■□□□ 1.35
GRN-211ENST00000588143 ADGRL1O94910 1474 aa23.47■■□□□ 1.35
GRN-211ENST00000588143 CDC42BPBQ9Y5S2 1711 aa23.45■■□□□ 1.34
GRN-211ENST00000588143 PREX2Q70Z35 1606 aa23.43■■□□□ 1.34
GRN-211ENST00000588143 CDC42BPAQ5VT25 1732 aa23.42■■□□□ 1.34
GRN-211ENST00000588143 ZNF777Q9ULD5 760 aaPredicted RBP23.41■■□□□ 1.34
GRN-211ENST00000588143 NCOA2Q15596 1464 aa23.41■■□□□ 1.34
GRN-211ENST00000588143 AFAP1Q8N556 730 aa23.4■■□□□ 1.34
GRN-211ENST00000588143 POGZQ7Z3K3 1410 aa23.4■■□□□ 1.34
GRN-211ENST00000588143 FRMPD1Q5SYB0 1578 aa23.39■■□□□ 1.33
GRN-211ENST00000588143 RICTORQ6R327 1708 aa23.38■■□□□ 1.33
GRN-211ENST00000588143 MAGI2Q86UL8 1455 aa23.36■■□□□ 1.33
GRN-211ENST00000588143 SUPT6HQ7KZ85 1726 aaKnown RBP23.36■■□□□ 1.33
GRN-211ENST00000588143 KIAA1107Q9UPP5 1409 aa23.36■■□□□ 1.33
GRN-211ENST00000588143 ARHGEF12Q9NZN5 1544 aa23.35■■□□□ 1.33
GRN-211ENST00000588143 HNRNPMP52272 730 aaKnown RBP eCLIP23.35■■□□□ 1.33
GRN-211ENST00000588143 ZNF518AQ6AHZ1 1483 aa23.35■■□□□ 1.33
GRN-211ENST00000588143 ZNF644Q9H582 1327 aaPredicted RBP23.33■■□□□ 1.33
GRN-211ENST00000588143 PLEKHH2Q8IVE3 1493 aa23.33■■□□□ 1.33
GRN-211ENST00000588143 ZMYM4Q5VZL5 1548 aa23.33■■□□□ 1.32
GRN-211ENST00000588143 ABCC1P33527 1531 aa23.32■■□□□ 1.32
GRN-211ENST00000588143 TRAPPC8Q9Y2L5 1435 aa23.32■■□□□ 1.32
GRN-211ENST00000588143 KDM4FA0A1W2PPD8 638 aa23.31■■□□□ 1.32
GRN-211ENST00000588143 SAMD9LQ8IVG5 1584 aa23.3■■□□□ 1.32
GRN-211ENST00000588143 RSPH4AQ5TD94 716 aa23.28■■□□□ 1.32
GRN-211ENST00000588143 MLH3Q9UHC1 1453 aa23.27■■□□□ 1.32
GRN-211ENST00000588143 ITSN2Q9NZM3 1697 aa23.27■■□□□ 1.32
GRN-211ENST00000588143 KDM5CP41229 1560 aa23.27■■□□□ 1.32
GRN-211ENST00000588143 YEATS2Q9ULM3 1422 aa23.26■■□□□ 1.31
GRN-211ENST00000588143 MYOM3Q5VTT5 1437 aa23.25■■□□□ 1.31
GRN-211ENST00000588143 MIA2Q96PC5 1412 aa23.25■■□□□ 1.31
GRN-211ENST00000588143 MBD5Q9P267 1494 aa23.24■■□□□ 1.31
GRN-211ENST00000588143 ZFYVE16Q7Z3T8 1539 aa23.24■■□□□ 1.31
GRN-211ENST00000588143 MYT1LQ9UL68 1186 aa23.24■■□□□ 1.31
GRN-211ENST00000588143 ATP10AO60312 1499 aa23.24■■□□□ 1.31
GRN-211ENST00000588143 SPAG9O60271 1321 aaKnown RBP23.23■■□□□ 1.31
GRN-211ENST00000588143 SYCP2Q9BX26 1530 aa23.23■■□□□ 1.31
GRN-211ENST00000588143 ARHGEF40Q8TER5 1519 aa23.22■■□□□ 1.31
GRN-211ENST00000588143 ARID4BQ4LE39 1312 aaPredicted RBP23.2■■□□□ 1.3
GRN-211ENST00000588143 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
GRN-211ENST00000588143 CAMSAP2Q08AD1 1489 aa23.17■■□□□ 1.3
GRN-211ENST00000588143 HECW2Q9P2P5 1572 aa23.16■■□□□ 1.3
GRN-211ENST00000588143 C9orf84Q5VXU9 1444 aa23.15■■□□□ 1.3
GRN-211ENST00000588143 TSPY4P0CV99 314 aa23.14■■□□□ 1.29
GRN-211ENST00000588143 TSPY10P0CW01 314 aa23.14■■□□□ 1.29
GRN-211ENST00000588143 RTEL1-TNFRSF6BF6WH68 1400 aa23.14■■□□□ 1.29
GRN-211ENST00000588143 KIDINS220Q9ULH0 1771 aa23.12■■□□□ 1.29
GRN-211ENST00000588143 FGD6Q6ZV73 1430 aa23.11■■□□□ 1.29
GRN-211ENST00000588143 CCDC141Q6ZP82 1450 aa23.11■■□□□ 1.29
GRN-211ENST00000588143 ARHGEF5Q12774 1597 aa23.1■■□□□ 1.29
GRN-211ENST00000588143 DIP2CQ9Y2E4 1556 aa23.1■■□□□ 1.29
GRN-211ENST00000588143 REREQ9P2R6 1566 aa23.08■■□□□ 1.29
GRN-211ENST00000588143 ATP7AQ04656 1500 aa23.08■■□□□ 1.28
GRN-211ENST00000588143 PPARGC1BQ86YN6 1023 aaKnown RBP23.07■■□□□ 1.28
GRN-211ENST00000588143 ABCA6Q8N139 1617 aa23.06■■□□□ 1.28
GRN-211ENST00000588143 TCOF1Q13428 1488 aaKnown RBP23.05■■□□□ 1.28
GRN-211ENST00000588143 INO80Q9ULG1 1556 aaPredicted RBP23.05■■□□□ 1.28
GRN-211ENST00000588143 AGLP35573 1532 aa23.04■■□□□ 1.28
GRN-211ENST00000588143 MLECQ14165 292 aa23.04■■□□□ 1.28
GRN-211ENST00000588143 BCORL1Q5H9F3 1711 aa23.04■■□□□ 1.28
GRN-211ENST00000588143 SIGLEC1Q9BZZ2 1709 aa23.04■■□□□ 1.28
GRN-211ENST00000588143 ADAMTSL3P82987 1691 aa23.03■■□□□ 1.28
GRN-211ENST00000588143 PTPN23Q9H3S7 1636 aa23.03■■□□□ 1.28
GRN-211ENST00000588143 DHX29Q7Z478 1369 aaKnown RBP23.01■■□□□ 1.27
GRN-211ENST00000588143 A2MP01023 1474 aa23.01■■□□□ 1.27
GRN-211ENST00000588143 ABCC5O15440 1437 aa23■■□□□ 1.27
GRN-211ENST00000588143 FAM50AQ14320 339 aaKnown RBP22.98■■□□□ 1.27
GRN-211ENST00000588143 MAST1Q9Y2H9 1570 aa22.96■■□□□ 1.27
GRN-211ENST00000588143 PTPRMP28827 1452 aa22.95■■□□□ 1.26
GRN-211ENST00000588143 DAPK1P53355 1430 aa22.95■■□□□ 1.26
GRN-211ENST00000588143 PPP6R1Q9UPN7 881 aa22.95■■□□□ 1.26
GRN-211ENST00000588143 ADGBQ8N7X0 1667 aa22.93■■□□□ 1.26
GRN-211ENST00000588143 PLXNC1O60486 1568 aa22.93■■□□□ 1.26
GRN-211ENST00000588143 SHANK2Q9UPX8 1470 aa22.92■■□□□ 1.26
GRN-211ENST00000588143 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.92■■□□□ 1.264e-11■■■■■ 30.2
GRN-211ENST00000588143 MADDQ8WXG6 1647 aa22.92■■□□□ 1.26
GRN-211ENST00000588143 DNMT1P26358 1616 aaKnown RBP22.9■■□□□ 1.26
GRN-211ENST00000588143 KIF3BO15066 747 aa22.9■■□□□ 1.26
GRN-211ENST00000588143 GGT6Q6P531 493 aa22.9■■□□□ 1.26
GRN-211ENST00000588143 ESF1Q9H501 851 aaKnown RBP22.9■■□□□ 1.26
GRN-211ENST00000588143 CHIC2Q9UKJ5 165 aa22.89■■□□□ 1.25
GRN-211ENST00000588143 RRP7BPQ9NSQ0 103 aa22.88■■□□□ 1.25
GRN-211ENST00000588143 ANKRD30AQ9BXX3 1397 aa22.87■■□□□ 1.25
GRN-211ENST00000588143 NCOA1Q15788 1441 aa22.86■■□□□ 1.25
GRN-211ENST00000588143 KIF15Q9NS87 1388 aa22.85■■□□□ 1.25
GRN-211ENST00000588143 CNTLNQ9NXG0 1405 aa22.84■■□□□ 1.25
GRN-211ENST00000588143 RRBP1Q9P2E9 1410 aaKnown RBP22.83■■□□□ 1.25
GRN-211ENST00000588143 RIMS1Q86UR5 1692 aaKnown RBP22.83■■□□□ 1.24
GRN-211ENST00000588143 DUOX2Q9NRD8 1548 aa22.82■■□□□ 1.24
GRN-211ENST00000588143 CEBPAP49715 358 aaPredicted RBP22.82■■□□□ 1.24
GRN-211ENST00000588143 FER1L4A9Z1Z3 1794 aa22.81■■□□□ 1.24
GRN-211ENST00000588143 CROCC2H7BZ55 1655 aa22.81■■□□□ 1.24
GRN-211ENST00000588143 PTPRKQ15262 1439 aa22.81■■□□□ 1.24
GRN-211ENST00000588143 ADGRL2O95490 1459 aa22.8■■□□□ 1.24
GRN-211ENST00000588143 ZMYM3Q14202 1370 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms