RNA–Protein interactions for RNA: ENST00000587367.5

SNRPD2-204, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD2, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-204ENST00000587367 SCAPERQ9BY12 1400 aa17.47■□□□□ 0.39
SNRPD2-204ENST00000587367 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
SNRPD2-204ENST00000587367 CDC42BPBQ9Y5S2 1711 aa17.47■□□□□ 0.39
SNRPD2-204ENST00000587367 MYT1LQ9UL68 1186 aa17.47■□□□□ 0.39
SNRPD2-204ENST00000587367 ARID4BQ4LE39 1312 aaPredicted RBP17.47■□□□□ 0.39
SNRPD2-204ENST00000587367 CDC42BPAQ5VT25 1732 aa17.46■□□□□ 0.39
SNRPD2-204ENST00000587367 ARHGEF40Q8TER5 1519 aa17.43■□□□□ 0.38
SNRPD2-204ENST00000587367 ZNF777Q9ULD5 760 aaPredicted RBP17.43■□□□□ 0.38
SNRPD2-204ENST00000587367 POGZQ7Z3K3 1410 aa17.43■□□□□ 0.38
SNRPD2-204ENST00000587367 ZFYVE16Q7Z3T8 1539 aa17.42■□□□□ 0.38
SNRPD2-204ENST00000587367 EHBP1L1Q8N3D4 1523 aa17.42■□□□□ 0.38
SNRPD2-204ENST00000587367 ZMYM4Q5VZL5 1548 aa17.42■□□□□ 0.38
SNRPD2-204ENST00000587367 VPS8Q8N3P4 1428 aa17.41■□□□□ 0.38
SNRPD2-204ENST00000587367 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
SNRPD2-204ENST00000587367 ZNF518AQ6AHZ1 1483 aa17.39■□□□□ 0.37
SNRPD2-204ENST00000587367 MAGI2Q86UL8 1455 aa17.38■□□□□ 0.37
SNRPD2-204ENST00000587367 ITSN2Q9NZM3 1697 aa17.38■□□□□ 0.37
SNRPD2-204ENST00000587367 ABCC1P33527 1531 aa17.37■□□□□ 0.37
SNRPD2-204ENST00000587367 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
SNRPD2-204ENST00000587367 SUPT6HQ7KZ85 1726 aaKnown RBP17.36■□□□□ 0.37
SNRPD2-204ENST00000587367 APLP2Q06481 763 aa17.36■□□□□ 0.37
SNRPD2-204ENST00000587367 CFDP1Q9UEE9 299 aaPredicted RBP17.36■□□□□ 0.37
SNRPD2-204ENST00000587367 YEATS2Q9ULM3 1422 aa17.35■□□□□ 0.37
SNRPD2-204ENST00000587367 GPATCH8Q9UKJ3 1502 aaKnown RBP17.35■□□□□ 0.37
SNRPD2-204ENST00000587367 BCORL1Q5H9F3 1711 aa17.34■□□□□ 0.37
SNRPD2-204ENST00000587367 AFAP1Q8N556 730 aa17.34■□□□□ 0.37
SNRPD2-204ENST00000587367 HECW2Q9P2P5 1572 aa17.34■□□□□ 0.37
SNRPD2-204ENST00000587367 SAMD9LQ8IVG5 1584 aa17.32■□□□□ 0.36
SNRPD2-204ENST00000587367 KDM5CP41229 1560 aa17.32■□□□□ 0.36
SNRPD2-204ENST00000587367 SYCP2Q9BX26 1530 aa17.31■□□□□ 0.36
SNRPD2-204ENST00000587367 MLECQ14165 292 aa17.31■□□□□ 0.36
SNRPD2-204ENST00000587367 ATP10AO60312 1499 aa17.31■□□□□ 0.36
SNRPD2-204ENST00000587367 ADAMTSL3P82987 1691 aa17.3■□□□□ 0.36
SNRPD2-204ENST00000587367 PLEKHH2Q8IVE3 1493 aa17.3■□□□□ 0.36
SNRPD2-204ENST00000587367 C9orf84Q5VXU9 1444 aa17.3■□□□□ 0.36
SNRPD2-204ENST00000587367 TRAPPC8Q9Y2L5 1435 aa17.3■□□□□ 0.36
SNRPD2-204ENST00000587367 MADDQ8WXG6 1647 aa17.29■□□□□ 0.36
SNRPD2-204ENST00000587367 ARHGEF12Q9NZN5 1544 aa17.28■□□□□ 0.36
SNRPD2-204ENST00000587367 HNRNPMP52272 730 aaKnown RBP eCLIP17.28■□□□□ 0.36
SNRPD2-204ENST00000587367 NCOA2Q15596 1464 aa17.28■□□□□ 0.36
SNRPD2-204ENST00000587367 RIMS1Q86UR5 1692 aaKnown RBP17.28■□□□□ 0.36
SNRPD2-204ENST00000587367 PLPPR3Q6T4P5 718 aa17.27■□□□□ 0.36
SNRPD2-204ENST00000587367 LRRC9Q6ZRR7 1453 aa17.26■□□□□ 0.35
SNRPD2-204ENST00000587367 FER1L4A9Z1Z3 1794 aa17.26■□□□□ 0.35
SNRPD2-204ENST00000587367 ABCA6Q8N139 1617 aa17.25■□□□□ 0.35
SNRPD2-204ENST00000587367 MLH3Q9UHC1 1453 aa17.25■□□□□ 0.35
SNRPD2-204ENST00000587367 SPAG9O60271 1321 aaKnown RBP17.25■□□□□ 0.35
SNRPD2-204ENST00000587367 SIGLEC1Q9BZZ2 1709 aa17.25■□□□□ 0.35
SNRPD2-204ENST00000587367 DIP2CQ9Y2E4 1556 aa17.25■□□□□ 0.35
SNRPD2-204ENST00000587367 PTPRMP28827 1452 aa17.24■□□□□ 0.35
SNRPD2-204ENST00000587367 KIDINS220Q9ULH0 1771 aa17.23■□□□□ 0.35
SNRPD2-204ENST00000587367 MAP3K1Q13233 1512 aa17.23■□□□□ 0.35
SNRPD2-204ENST00000587367 KIAA1107Q9UPP5 1409 aa17.22■□□□□ 0.35
SNRPD2-204ENST00000587367 ATP7AQ04656 1500 aa17.21■□□□□ 0.34
SNRPD2-204ENST00000587367 ZNF644Q9H582 1327 aaPredicted RBP17.21■□□□□ 0.34
SNRPD2-204ENST00000587367 KANK4Q5T7N3 995 aaPredicted RBP17.2■□□□□ 0.34
SNRPD2-204ENST00000587367 ESF1Q9H501 851 aaKnown RBP17.2■□□□□ 0.34
SNRPD2-204ENST00000587367 CAMSAP2Q08AD1 1489 aa17.19■□□□□ 0.34
SNRPD2-204ENST00000587367 REREQ9P2R6 1566 aa17.18■□□□□ 0.34
SNRPD2-204ENST00000587367 INO80Q9ULG1 1556 aaPredicted RBP17.17■□□□□ 0.34
SNRPD2-204ENST00000587367 ADGBQ8N7X0 1667 aa17.15■□□□□ 0.34
SNRPD2-204ENST00000587367 CCDC141Q6ZP82 1450 aa17.14■□□□□ 0.33
SNRPD2-204ENST00000587367 MYOM3Q5VTT5 1437 aa17.13■□□□□ 0.33
SNRPD2-204ENST00000587367 AGLP35573 1532 aa17.12■□□□□ 0.33
SNRPD2-204ENST00000587367 TSPY4P0CV99 314 aa17.12■□□□□ 0.33
SNRPD2-204ENST00000587367 TSPY10P0CW01 314 aa17.12■□□□□ 0.33
SNRPD2-204ENST00000587367 RSPH4AQ5TD94 716 aa17.12■□□□□ 0.33
SNRPD2-204ENST00000587367 A2MP01023 1474 aa17.12■□□□□ 0.33
SNRPD2-204ENST00000587367 MBD5Q9P267 1494 aa17.12■□□□□ 0.33
SNRPD2-204ENST00000587367 ARHGEF5Q12774 1597 aa17.1■□□□□ 0.33
SNRPD2-204ENST00000587367 MIA2Q96PC5 1412 aa17.09■□□□□ 0.33
SNRPD2-204ENST00000587367 RTEL1-TNFRSF6BF6WH68 1400 aa17.08■□□□□ 0.32
SNRPD2-204ENST00000587367 CEBPAP49715 358 aaPredicted RBP17.06■□□□□ 0.32
SNRPD2-204ENST00000587367 GGT6Q6P531 493 aa17.06■□□□□ 0.32
SNRPD2-204ENST00000587367 PTPN23Q9H3S7 1636 aa17.06■□□□□ 0.32
SNRPD2-204ENST00000587367 PLXNC1O60486 1568 aa17.06■□□□□ 0.32
SNRPD2-204ENST00000587367 CNTLNQ9NXG0 1405 aa17.04■□□□□ 0.32
SNRPD2-204ENST00000587367 C3P01024 1663 aa17.04■□□□□ 0.32
SNRPD2-204ENST00000587367 CLTCQ00610 1675 aaKnown RBP17.03■□□□□ 0.32
SNRPD2-204ENST00000587367 PREX1Q8TCU6 1659 aa17.03■□□□□ 0.32
SNRPD2-204ENST00000587367 FGD6Q6ZV73 1430 aa17.01■□□□□ 0.31
SNRPD2-204ENST00000587367 DHX29Q7Z478 1369 aaKnown RBP17.01■□□□□ 0.31
SNRPD2-204ENST00000587367 MROH2AA6NES4 1674 aa17.01■□□□□ 0.31
SNRPD2-204ENST00000587367 SETD1BQ9UPS6 1966 aaKnown RBP17■□□□□ 0.31
SNRPD2-204ENST00000587367 LMTK3Q96Q04 1460 aa17■□□□□ 0.31
SNRPD2-204ENST00000587367 KIF3BO15066 747 aa17■□□□□ 0.31
SNRPD2-204ENST00000587367 MAST1Q9Y2H9 1570 aa16.99■□□□□ 0.31
SNRPD2-204ENST00000587367 CROCC2H7BZ55 1655 aa16.99■□□□□ 0.31
SNRPD2-204ENST00000587367 FAM50AQ14320 339 aaKnown RBP16.98■□□□□ 0.31
SNRPD2-204ENST00000587367 UHRF1BP1Q6BDS2 1440 aa16.97■□□□□ 0.31
SNRPD2-204ENST00000587367 HSPA2P54652 639 aa16.97■□□□□ 0.31
SNRPD2-204ENST00000587367 DNMT1P26358 1616 aaKnown RBP16.96■□□□□ 0.3
SNRPD2-204ENST00000587367 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
SNRPD2-204ENST00000587367 TCOF1Q13428 1488 aaKnown RBP16.94■□□□□ 0.3
SNRPD2-204ENST00000587367 ZMYM3Q14202 1370 aa16.94■□□□□ 0.3
SNRPD2-204ENST00000587367 PPARGC1BQ86YN6 1023 aaKnown RBP16.94■□□□□ 0.3
SNRPD2-204ENST00000587367 DAPK1P53355 1430 aa16.94■□□□□ 0.3
SNRPD2-204ENST00000587367 SHANK2Q9UPX8 1470 aa16.93■□□□□ 0.3
SNRPD2-204ENST00000587367 WASHC2CQ9Y4E1 1318 aa16.93■□□□□ 0.3
SNRPD2-204ENST00000587367 CHIC2Q9UKJ5 165 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms