RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 COL17A1Q9UMD9 1497 aaPredicted RBP10.23□□□□□ -0.77
NPC1-206ENST00000587223 RAPGEF3O95398 923 aa10.22□□□□□ -0.77
NPC1-206ENST00000587223 CFDP1Q9UEE9 299 aaPredicted RBP10.22□□□□□ -0.77
NPC1-206ENST00000587223 ZNF777Q9ULD5 760 aaPredicted RBP10.22□□□□□ -0.77
NPC1-206ENST00000587223 CCNB3Q8WWL7 1395 aa10.22□□□□□ -0.77
NPC1-206ENST00000587223 MAP3K1Q13233 1512 aa10.22□□□□□ -0.77
NPC1-206ENST00000587223 TIAM1Q13009 1591 aa10.22□□□□□ -0.77
NPC1-206ENST00000587223 EHBP1L1Q8N3D4 1523 aa10.21□□□□□ -0.78
NPC1-206ENST00000587223 ARHGAP5Q13017 1502 aa10.2□□□□□ -0.78
NPC1-206ENST00000587223 LRRC9Q6ZRR7 1453 aa10.2□□□□□ -0.78
NPC1-206ENST00000587223 ARAP3Q8WWN8 1544 aa10.2□□□□□ -0.78
NPC1-206ENST00000587223 MYO5CQ9NQX4 1742 aa10.2□□□□□ -0.78
NPC1-206ENST00000587223 GPATCH8Q9UKJ3 1502 aaKnown RBP10.19□□□□□ -0.78
NPC1-206ENST00000587223 SCAPERQ9BY12 1400 aa10.19□□□□□ -0.78
NPC1-206ENST00000587223 CFAP74Q9C0B2 1584 aa10.18□□□□□ -0.78
NPC1-206ENST00000587223 DENND4BO75064 1496 aaPredicted RBP10.18□□□□□ -0.78
NPC1-206ENST00000587223 ADGRL1O94910 1474 aa10.17□□□□□ -0.78
NPC1-206ENST00000587223 NCOA2Q15596 1464 aa10.17□□□□□ -0.78
NPC1-206ENST00000587223 SUPT6HQ7KZ85 1726 aaKnown RBP10.17□□□□□ -0.78
NPC1-206ENST00000587223 MYT1LQ9UL68 1186 aa10.17□□□□□ -0.78
NPC1-206ENST00000587223 CDC42BPBQ9Y5S2 1711 aa10.16□□□□□ -0.78
NPC1-206ENST00000587223 HNRNPMP52272 730 aaKnown RBP eCLIP10.16□□□□□ -0.78
NPC1-206ENST00000587223 CDC42BPAQ5VT25 1732 aa10.16□□□□□ -0.78
NPC1-206ENST00000587223 PPARGC1BQ86YN6 1023 aaKnown RBP10.15□□□□□ -0.78
NPC1-206ENST00000587223 AFAP1Q8N556 730 aa10.15□□□□□ -0.78
NPC1-206ENST00000587223 PREX2Q70Z35 1606 aa10.15□□□□□ -0.79
NPC1-206ENST00000587223 ZNF644Q9H582 1327 aaPredicted RBP10.14□□□□□ -0.79
NPC1-206ENST00000587223 PPP4R3CPQ6ZMV5 832 aa10.14□□□□□ -0.79
NPC1-206ENST00000587223 RSPH4AQ5TD94 716 aa10.12□□□□□ -0.79
NPC1-206ENST00000587223 PLEKHH2Q8IVE3 1493 aa10.11□□□□□ -0.79
NPC1-206ENST00000587223 POGZQ7Z3K3 1410 aa10.11□□□□□ -0.79
NPC1-206ENST00000587223 KIAA1107Q9UPP5 1409 aa10.11□□□□□ -0.79
NPC1-206ENST00000587223 ITSN2Q9NZM3 1697 aa10.11□□□□□ -0.79
NPC1-206ENST00000587223 ARHGEF12Q9NZN5 1544 aa10.11□□□□□ -0.79
NPC1-206ENST00000587223 MYOM3Q5VTT5 1437 aa10.1□□□□□ -0.79
NPC1-206ENST00000587223 TRAPPC8Q9Y2L5 1435 aa10.1□□□□□ -0.79
NPC1-206ENST00000587223 RICTORQ6R327 1708 aa10.1□□□□□ -0.79
NPC1-206ENST00000587223 ZNF518AQ6AHZ1 1483 aa10.1□□□□□ -0.79
NPC1-206ENST00000587223 SAMD9LQ8IVG5 1584 aa10.09□□□□□ -0.79
NPC1-206ENST00000587223 SPAG9O60271 1321 aaKnown RBP10.09□□□□□ -0.79
NPC1-206ENST00000587223 ARID4BQ4LE39 1312 aaPredicted RBP10.09□□□□□ -0.79
NPC1-206ENST00000587223 ABCC1P33527 1531 aa10.09□□□□□ -0.79
NPC1-206ENST00000587223 TSPY4P0CV99 314 aa10.09□□□□□ -0.79
NPC1-206ENST00000587223 TSPY10P0CW01 314 aa10.09□□□□□ -0.79
NPC1-206ENST00000587223 MAGI2Q86UL8 1455 aa10.09□□□□□ -0.79
NPC1-206ENST00000587223 FRMPD1Q5SYB0 1578 aa10.09□□□□□ -0.79
NPC1-206ENST00000587223 MIA2Q96PC5 1412 aa10.08□□□□□ -0.8
NPC1-206ENST00000587223 SYCP2Q9BX26 1530 aa10.07□□□□□ -0.8
NPC1-206ENST00000587223 ZMYM4Q5VZL5 1548 aa10.07□□□□□ -0.8
NPC1-206ENST00000587223 YEATS2Q9ULM3 1422 aa10.07□□□□□ -0.8
NPC1-206ENST00000587223 CAMSAP2Q08AD1 1489 aa10.06□□□□□ -0.8
NPC1-206ENST00000587223 FAM50AQ14320 339 aaKnown RBP10.06□□□□□ -0.8
NPC1-206ENST00000587223 ZFYVE16Q7Z3T8 1539 aa10.06□□□□□ -0.8
NPC1-206ENST00000587223 MBD5Q9P267 1494 aa10.05□□□□□ -0.8
NPC1-206ENST00000587223 MLH3Q9UHC1 1453 aa10.05□□□□□ -0.8
NPC1-206ENST00000587223 KDM5CP41229 1560 aa10.05□□□□□ -0.8
NPC1-206ENST00000587223 ATP10AO60312 1499 aa10.04□□□□□ -0.8
NPC1-206ENST00000587223 KDM4FA0A1W2PPD8 638 aa10.04□□□□□ -0.8
NPC1-206ENST00000587223 FGD6Q6ZV73 1430 aa10.04□□□□□ -0.8
NPC1-206ENST00000587223 MLECQ14165 292 aa10.03□□□□□ -0.8
NPC1-206ENST00000587223 HECW2Q9P2P5 1572 aa10.03□□□□□ -0.8
NPC1-206ENST00000587223 CCDC141Q6ZP82 1450 aa10.03□□□□□ -0.8
NPC1-206ENST00000587223 ARHGEF40Q8TER5 1519 aa10.02□□□□□ -0.8
NPC1-206ENST00000587223 PTPN23Q9H3S7 1636 aa10.02□□□□□ -0.81
NPC1-206ENST00000587223 RTEL1-TNFRSF6BF6WH68 1400 aa10.01□□□□□ -0.81
NPC1-206ENST00000587223 C9orf84Q5VXU9 1444 aa10.01□□□□□ -0.81
NPC1-206ENST00000587223 KIDINS220Q9ULH0 1771 aa10.01□□□□□ -0.81
NPC1-206ENST00000587223 ARHGEF5Q12774 1597 aa10.01□□□□□ -0.81
NPC1-206ENST00000587223 CHIC2Q9UKJ5 165 aa10□□□□□ -0.81
NPC1-206ENST00000587223 ATP7AQ04656 1500 aa10□□□□□ -0.81
NPC1-206ENST00000587223 TCOF1Q13428 1488 aaKnown RBP9.99□□□□□ -0.81
NPC1-206ENST00000587223 ITGAEP38570 1179 aa9.99□□□□□ -0.81
NPC1-206ENST00000587223 DIP2CQ9Y2E4 1556 aa9.99□□□□□ -0.81
NPC1-206ENST00000587223 ABCC5O15440 1437 aa9.99□□□□□ -0.81
NPC1-206ENST00000587223 ABCA6Q8N139 1617 aa9.98□□□□□ -0.81
NPC1-206ENST00000587223 ESF1Q9H501 851 aaKnown RBP9.98□□□□□ -0.81
NPC1-206ENST00000587223 RRP7BPQ9NSQ0 103 aa9.98□□□□□ -0.81
NPC1-206ENST00000587223 DAPK1P53355 1430 aa9.98□□□□□ -0.81
NPC1-206ENST00000587223 A2MP01023 1474 aa9.98□□□□□ -0.81
NPC1-206ENST00000587223 KIF3BO15066 747 aa9.97□□□□□ -0.81
NPC1-206ENST00000587223 NCBP3Q53F19 620 aaKnown RBP9.97□□□□□ -0.81
NPC1-206ENST00000587223 GGT6Q6P531 493 aa9.97□□□□□ -0.81
NPC1-206ENST00000587223 DHX29Q7Z478 1369 aaKnown RBP9.97□□□□□ -0.81
NPC1-206ENST00000587223 INO80Q9ULG1 1556 aaPredicted RBP9.97□□□□□ -0.81
NPC1-206ENST00000587223 SLC4A1APQ9BWU0 796 aaKnown RBP9.95□□□□□ -0.82
NPC1-206ENST00000587223 ANKRD30AQ9BXX3 1397 aa9.95□□□□□ -0.82
NPC1-206ENST00000587223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.95□□□□□ -0.82
NPC1-206ENST00000587223 AGLP35573 1532 aa9.95□□□□□ -0.82
NPC1-206ENST00000587223 REREQ9P2R6 1566 aa9.95□□□□□ -0.82
NPC1-206ENST00000587223 BCORL1Q5H9F3 1711 aa9.94□□□□□ -0.82
NPC1-206ENST00000587223 ADGBQ8N7X0 1667 aa9.94□□□□□ -0.82
NPC1-206ENST00000587223 DNMT1P26358 1616 aaKnown RBP9.94□□□□□ -0.82
NPC1-206ENST00000587223 MAST1Q9Y2H9 1570 aa9.94□□□□□ -0.82
NPC1-206ENST00000587223 SIGLEC1Q9BZZ2 1709 aa9.93□□□□□ -0.82
NPC1-206ENST00000587223 SHANK2Q9UPX8 1470 aa9.93□□□□□ -0.82
NPC1-206ENST00000587223 RRBP1Q9P2E9 1410 aaKnown RBP9.93□□□□□ -0.82
NPC1-206ENST00000587223 KIF15Q9NS87 1388 aa9.93□□□□□ -0.82
NPC1-206ENST00000587223 ADAMTSL3P82987 1691 aa9.93□□□□□ -0.82
NPC1-206ENST00000587223 NCOA1Q15788 1441 aa9.92□□□□□ -0.82
NPC1-206ENST00000587223 PTPRMP28827 1452 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms