RNA–Protein interactions for RNA: ENST00000587191.3

PTBP1-213, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-213ENST00000587191 TIAM1Q13009 1591 aa18.27■□□□□ 0.52
PTBP1-213ENST00000587191 MYT1LQ9UL68 1186 aa18.27■□□□□ 0.52
PTBP1-213ENST00000587191 PLCH2O75038 1416 aa18.26■□□□□ 0.51
PTBP1-213ENST00000587191 APLP2Q06481 763 aa18.24■□□□□ 0.51
PTBP1-213ENST00000587191 SCAPERQ9BY12 1400 aa18.22■□□□□ 0.51
PTBP1-213ENST00000587191 PREX2Q70Z35 1606 aa18.2■□□□□ 0.5
PTBP1-213ENST00000587191 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
PTBP1-213ENST00000587191 LRRC9Q6ZRR7 1453 aa18.19■□□□□ 0.5
PTBP1-213ENST00000587191 ARHGAP5Q13017 1502 aa18.18■□□□□ 0.5
PTBP1-213ENST00000587191 CDC42BPAQ5VT25 1732 aa18.18■□□□□ 0.5
PTBP1-213ENST00000587191 CDC42BPBQ9Y5S2 1711 aa18.18■□□□□ 0.5
PTBP1-213ENST00000587191 ZNF777Q9ULD5 760 aaPredicted RBP18.17■□□□□ 0.5
PTBP1-213ENST00000587191 CCNB3Q8WWL7 1395 aa18.17■□□□□ 0.5
PTBP1-213ENST00000587191 ITSN2Q9NZM3 1697 aa18.15■□□□□ 0.5
PTBP1-213ENST00000587191 GPATCH8Q9UKJ3 1502 aaKnown RBP18.14■□□□□ 0.49
PTBP1-213ENST00000587191 POGZQ7Z3K3 1410 aa18.14■□□□□ 0.49
PTBP1-213ENST00000587191 MAGI2Q86UL8 1455 aa18.13■□□□□ 0.49
PTBP1-213ENST00000587191 AFAP1Q8N556 730 aa18.12■□□□□ 0.49
PTBP1-213ENST00000587191 NCOA2Q15596 1464 aa18.12■□□□□ 0.49
PTBP1-213ENST00000587191 CFDP1Q9UEE9 299 aaPredicted RBP18.11■□□□□ 0.49
PTBP1-213ENST00000587191 RICTORQ6R327 1708 aa18.1■□□□□ 0.49
PTBP1-213ENST00000587191 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
PTBP1-213ENST00000587191 MLECQ14165 292 aa18.09■□□□□ 0.49
PTBP1-213ENST00000587191 KANK4Q5T7N3 995 aaPredicted RBP18.08■□□□□ 0.48
PTBP1-213ENST00000587191 FRMPD1Q5SYB0 1578 aa18.08■□□□□ 0.48
PTBP1-213ENST00000587191 ZFYVE16Q7Z3T8 1539 aa18.08■□□□□ 0.48
PTBP1-213ENST00000587191 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
PTBP1-213ENST00000587191 ABCC1P33527 1531 aa18.07■□□□□ 0.48
PTBP1-213ENST00000587191 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
PTBP1-213ENST00000587191 ZMYM4Q5VZL5 1548 aa18.06■□□□□ 0.48
PTBP1-213ENST00000587191 ESF1Q9H501 851 aaKnown RBP18.05■□□□□ 0.48
PTBP1-213ENST00000587191 YEATS2Q9ULM3 1422 aa18.05■□□□□ 0.48
PTBP1-213ENST00000587191 KIAA1107Q9UPP5 1409 aa18.05■□□□□ 0.48
PTBP1-213ENST00000587191 SAMD9LQ8IVG5 1584 aa18.04■□□□□ 0.48
PTBP1-213ENST00000587191 ARHGEF40Q8TER5 1519 aa18.03■□□□□ 0.48
PTBP1-213ENST00000587191 ATP10AO60312 1499 aa18.03■□□□□ 0.48
PTBP1-213ENST00000587191 HNRNPMP52272 730 aaKnown RBP eCLIP18.02■□□□□ 0.484e-7■■■■□ 20
PTBP1-213ENST00000587191 KDM5CP41229 1560 aa18.01■□□□□ 0.47
PTBP1-213ENST00000587191 MYOM3Q5VTT5 1437 aa18.01■□□□□ 0.47
PTBP1-213ENST00000587191 MIA2Q96PC5 1412 aa18.01■□□□□ 0.47
PTBP1-213ENST00000587191 PTPRMP28827 1452 aa18■□□□□ 0.47
PTBP1-213ENST00000587191 SPAG9O60271 1321 aaKnown RBP17.99■□□□□ 0.47
PTBP1-213ENST00000587191 C9orf84Q5VXU9 1444 aa17.99■□□□□ 0.47
PTBP1-213ENST00000587191 SYCP2Q9BX26 1530 aa17.99■□□□□ 0.47
PTBP1-213ENST00000587191 ARHGEF12Q9NZN5 1544 aa17.98■□□□□ 0.47
PTBP1-213ENST00000587191 RSPH4AQ5TD94 716 aa17.97■□□□□ 0.47
PTBP1-213ENST00000587191 TRAPPC8Q9Y2L5 1435 aa17.97■□□□□ 0.47
PTBP1-213ENST00000587191 HECW2Q9P2P5 1572 aa17.96■□□□□ 0.47
PTBP1-213ENST00000587191 CAMSAP2Q08AD1 1489 aa17.96■□□□□ 0.47
PTBP1-213ENST00000587191 MLH3Q9UHC1 1453 aa17.96■□□□□ 0.47
PTBP1-213ENST00000587191 BCORL1Q5H9F3 1711 aa17.96■□□□□ 0.47
PTBP1-213ENST00000587191 ADAMTSL3P82987 1691 aa17.95■□□□□ 0.46
PTBP1-213ENST00000587191 MBD5Q9P267 1494 aa17.93■□□□□ 0.46
PTBP1-213ENST00000587191 ZNF644Q9H582 1327 aaPredicted RBP17.92■□□□□ 0.46
PTBP1-213ENST00000587191 ARHGEF5Q12774 1597 aa17.91■□□□□ 0.46
PTBP1-213ENST00000587191 MADDQ8WXG6 1647 aa17.91■□□□□ 0.46
PTBP1-213ENST00000587191 CCDC141Q6ZP82 1450 aa17.91■□□□□ 0.46
PTBP1-213ENST00000587191 FGD6Q6ZV73 1430 aa17.9■□□□□ 0.46
PTBP1-213ENST00000587191 PTPN23Q9H3S7 1636 aa17.9■□□□□ 0.46
PTBP1-213ENST00000587191 KIDINS220Q9ULH0 1771 aa17.89■□□□□ 0.45
PTBP1-213ENST00000587191 TSPY4P0CV99 314 aa17.88■□□□□ 0.45
PTBP1-213ENST00000587191 TSPY10P0CW01 314 aa17.88■□□□□ 0.45
PTBP1-213ENST00000587191 RTEL1-TNFRSF6BF6WH68 1400 aa17.88■□□□□ 0.45
PTBP1-213ENST00000587191 TCOF1Q13428 1488 aaKnown RBP17.88■□□□□ 0.45
PTBP1-213ENST00000587191 ATP7AQ04656 1500 aa17.88■□□□□ 0.45
PTBP1-213ENST00000587191 REREQ9P2R6 1566 aa17.87■□□□□ 0.45
PTBP1-213ENST00000587191 INO80Q9ULG1 1556 aaPredicted RBP17.87■□□□□ 0.45
PTBP1-213ENST00000587191 DIP2CQ9Y2E4 1556 aa17.87■□□□□ 0.45
PTBP1-213ENST00000587191 RIMS1Q86UR5 1692 aaKnown RBP17.87■□□□□ 0.45
PTBP1-213ENST00000587191 CEBPAP49715 358 aaPredicted RBP17.85■□□□□ 0.45
PTBP1-213ENST00000587191 ABCA6Q8N139 1617 aa17.85■□□□□ 0.45
PTBP1-213ENST00000587191 GGT6Q6P531 493 aa17.83■□□□□ 0.44
PTBP1-213ENST00000587191 MAST1Q9Y2H9 1570 aa17.83■□□□□ 0.44
PTBP1-213ENST00000587191 ADGBQ8N7X0 1667 aa17.82■□□□□ 0.44
PTBP1-213ENST00000587191 AGLP35573 1532 aa17.81■□□□□ 0.44
PTBP1-213ENST00000587191 SHANK2Q9UPX8 1470 aa17.81■□□□□ 0.44
PTBP1-213ENST00000587191 CROCC2H7BZ55 1655 aa17.8■□□□□ 0.44
PTBP1-213ENST00000587191 DNMT1P26358 1616 aaKnown RBP17.8■□□□□ 0.44
PTBP1-213ENST00000587191 FER1L4A9Z1Z3 1794 aa17.79■□□□□ 0.44
PTBP1-213ENST00000587191 HSPA2P54652 639 aa17.79■□□□□ 0.44
PTBP1-213ENST00000587191 A2MP01023 1474 aa17.78■□□□□ 0.44
PTBP1-213ENST00000587191 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
PTBP1-213ENST00000587191 CNTLNQ9NXG0 1405 aa17.78■□□□□ 0.44
PTBP1-213ENST00000587191 SIGLEC1Q9BZZ2 1709 aa17.78■□□□□ 0.44
PTBP1-213ENST00000587191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.78■□□□□ 0.443e-7■■■□□ 16.4
PTBP1-213ENST00000587191 PPARGC1BQ86YN6 1023 aaKnown RBP17.77■□□□□ 0.44
PTBP1-213ENST00000587191 DAPK1P53355 1430 aa17.77■□□□□ 0.44
PTBP1-213ENST00000587191 PLXNC1O60486 1568 aa17.76■□□□□ 0.43
PTBP1-213ENST00000587191 ABCC5O15440 1437 aa17.76■□□□□ 0.43
PTBP1-213ENST00000587191 KIF3BO15066 747 aa17.76■□□□□ 0.43
PTBP1-213ENST00000587191 FAM50AQ14320 339 aaKnown RBP17.76■□□□□ 0.43
PTBP1-213ENST00000587191 DHX29Q7Z478 1369 aaKnown RBP17.73■□□□□ 0.43
PTBP1-213ENST00000587191 LMTK3Q96Q04 1460 aa17.73■□□□□ 0.43
PTBP1-213ENST00000587191 DMRT2Q9Y5R5 561 aa17.72■□□□□ 0.43
PTBP1-213ENST00000587191 UHRF1BP1Q6BDS2 1440 aa17.72■□□□□ 0.43
PTBP1-213ENST00000587191 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
PTBP1-213ENST00000587191 ZMYM3Q14202 1370 aa17.71■□□□□ 0.43
PTBP1-213ENST00000587191 ANKRD30AQ9BXX3 1397 aa17.7■□□□□ 0.42
PTBP1-213ENST00000587191 DUOX2Q9NRD8 1548 aa17.69■□□□□ 0.42
PTBP1-213ENST00000587191 WASHC2CQ9Y4E1 1318 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms