RNA–Protein interactions for RNA: ENST00000587098.1

CCDC130-207, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 617 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-207ENST00000587098 CDC42BPBQ9Y5S2 1711 aa23.19■■□□□ 1.3
CCDC130-207ENST00000587098 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
CCDC130-207ENST00000587098 GPATCH8Q9UKJ3 1502 aaKnown RBP23.16■■□□□ 1.3
CCDC130-207ENST00000587098 RICTORQ6R327 1708 aa23.16■■□□□ 1.3
CCDC130-207ENST00000587098 EHBP1L1Q8N3D4 1523 aa23.14■■□□□ 1.3
CCDC130-207ENST00000587098 CDC42BPAQ5VT25 1732 aa23.14■■□□□ 1.3
CCDC130-207ENST00000587098 PREX2Q70Z35 1606 aa23.14■■□□□ 1.29
CCDC130-207ENST00000587098 TIAM1Q13009 1591 aa23.14■■□□□ 1.29
CCDC130-207ENST00000587098 CCNB3Q8WWL7 1395 aa23.14■■□□□ 1.29
CCDC130-207ENST00000587098 ZNF777Q9ULD5 760 aaPredicted RBP23.13■■□□□ 1.29
CCDC130-207ENST00000587098 POGZQ7Z3K3 1410 aa23.11■■□□□ 1.29
CCDC130-207ENST00000587098 KANK4Q5T7N3 995 aaPredicted RBP23.11■■□□□ 1.29
CCDC130-207ENST00000587098 AFAP1Q8N556 730 aa23.11■■□□□ 1.29
CCDC130-207ENST00000587098 CFDP1Q9UEE9 299 aaPredicted RBP23.11■■□□□ 1.29
CCDC130-207ENST00000587098 MAP3K1Q13233 1512 aa23.08■■□□□ 1.28
CCDC130-207ENST00000587098 LRRC9Q6ZRR7 1453 aa23.07■■□□□ 1.28
CCDC130-207ENST00000587098 ZMYM4Q5VZL5 1548 aa23.07■■□□□ 1.28
CCDC130-207ENST00000587098 ARHGEF12Q9NZN5 1544 aa23.07■■□□□ 1.28
CCDC130-207ENST00000587098 APLP2Q06481 763 aa23.06■■□□□ 1.28
CCDC130-207ENST00000587098 NCOA2Q15596 1464 aa23.05■■□□□ 1.28
CCDC130-207ENST00000587098 YEATS2Q9ULM3 1422 aa23.05■■□□□ 1.28
CCDC130-207ENST00000587098 TRAPPC8Q9Y2L5 1435 aa23.05■■□□□ 1.28
CCDC130-207ENST00000587098 MAGI2Q86UL8 1455 aa23.05■■□□□ 1.28
CCDC130-207ENST00000587098 HNRNPMP52272 730 aaKnown RBP eCLIP23.04■■□□□ 1.28
CCDC130-207ENST00000587098 ZNF518AQ6AHZ1 1483 aa23.04■■□□□ 1.28
CCDC130-207ENST00000587098 ABCC1P33527 1531 aa23.03■■□□□ 1.28
CCDC130-207ENST00000587098 SUPT6HQ7KZ85 1726 aaKnown RBP23.02■■□□□ 1.28
CCDC130-207ENST00000587098 SAMD9LQ8IVG5 1584 aa23.02■■□□□ 1.28
CCDC130-207ENST00000587098 ZNF644Q9H582 1327 aaPredicted RBP23.02■■□□□ 1.28
CCDC130-207ENST00000587098 ZFYVE16Q7Z3T8 1539 aa23.01■■□□□ 1.27
CCDC130-207ENST00000587098 ARHGEF40Q8TER5 1519 aa23.01■■□□□ 1.27
CCDC130-207ENST00000587098 MYT1LQ9UL68 1186 aa23■■□□□ 1.27
CCDC130-207ENST00000587098 ARID4BQ4LE39 1312 aaPredicted RBP23■■□□□ 1.27
CCDC130-207ENST00000587098 ITSN2Q9NZM3 1697 aa22.99■■□□□ 1.27
CCDC130-207ENST00000587098 KDM5CP41229 1560 aa22.98■■□□□ 1.27
CCDC130-207ENST00000587098 KIAA1107Q9UPP5 1409 aa22.98■■□□□ 1.27
CCDC130-207ENST00000587098 PLEKHH2Q8IVE3 1493 aa22.96■■□□□ 1.27
CCDC130-207ENST00000587098 SYCP2Q9BX26 1530 aa22.96■■□□□ 1.27
CCDC130-207ENST00000587098 ATP10AO60312 1499 aa22.95■■□□□ 1.26
CCDC130-207ENST00000587098 MLH3Q9UHC1 1453 aa22.94■■□□□ 1.26
CCDC130-207ENST00000587098 SPAG9O60271 1321 aaKnown RBP22.91■■□□□ 1.26
CCDC130-207ENST00000587098 HECW2Q9P2P5 1572 aa22.91■■□□□ 1.26
CCDC130-207ENST00000587098 C9orf84Q5VXU9 1444 aa22.9■■□□□ 1.26
CCDC130-207ENST00000587098 SIGLEC1Q9BZZ2 1709 aa22.89■■□□□ 1.26
CCDC130-207ENST00000587098 MBD5Q9P267 1494 aa22.89■■□□□ 1.25
CCDC130-207ENST00000587098 KIDINS220Q9ULH0 1771 aa22.87■■□□□ 1.25
CCDC130-207ENST00000587098 MLECQ14165 292 aa22.87■■□□□ 1.25
CCDC130-207ENST00000587098 BCORL1Q5H9F3 1711 aa22.87■■□□□ 1.25
CCDC130-207ENST00000587098 ADAMTSL3P82987 1691 aa22.87■■□□□ 1.25
CCDC130-207ENST00000587098 DIP2CQ9Y2E4 1556 aa22.86■■□□□ 1.25
CCDC130-207ENST00000587098 CAMSAP2Q08AD1 1489 aa22.85■■□□□ 1.25
CCDC130-207ENST00000587098 MYOM3Q5VTT5 1437 aa22.85■■□□□ 1.25
CCDC130-207ENST00000587098 ABCA6Q8N139 1617 aa22.84■■□□□ 1.25
CCDC130-207ENST00000587098 RSPH4AQ5TD94 716 aa22.84■■□□□ 1.25
CCDC130-207ENST00000587098 MIA2Q96PC5 1412 aa22.82■■□□□ 1.24
CCDC130-207ENST00000587098 ATP7AQ04656 1500 aa22.79■■□□□ 1.24
CCDC130-207ENST00000587098 REREQ9P2R6 1566 aa22.79■■□□□ 1.24
CCDC130-207ENST00000587098 MADDQ8WXG6 1647 aa22.79■■□□□ 1.24
CCDC130-207ENST00000587098 CCDC141Q6ZP82 1450 aa22.78■■□□□ 1.24
CCDC130-207ENST00000587098 PTPRMP28827 1452 aa22.77■■□□□ 1.24
CCDC130-207ENST00000587098 INO80Q9ULG1 1556 aaPredicted RBP22.76■■□□□ 1.23
CCDC130-207ENST00000587098 RTEL1-TNFRSF6BF6WH68 1400 aa22.76■■□□□ 1.23
CCDC130-207ENST00000587098 TSPY4P0CV99 314 aa22.76■■□□□ 1.23
CCDC130-207ENST00000587098 TSPY10P0CW01 314 aa22.76■■□□□ 1.23
CCDC130-207ENST00000587098 AGLP35573 1532 aa22.74■■□□□ 1.23
CCDC130-207ENST00000587098 ARHGEF5Q12774 1597 aa22.74■■□□□ 1.23
CCDC130-207ENST00000587098 PPARGC1BQ86YN6 1023 aaKnown RBP22.72■■□□□ 1.23
CCDC130-207ENST00000587098 FGD6Q6ZV73 1430 aa22.72■■□□□ 1.23
CCDC130-207ENST00000587098 A2MP01023 1474 aa22.72■■□□□ 1.23
CCDC130-207ENST00000587098 RIMS1Q86UR5 1692 aaKnown RBP22.71■■□□□ 1.23
CCDC130-207ENST00000587098 PTPN23Q9H3S7 1636 aa22.69■■□□□ 1.22
CCDC130-207ENST00000587098 PLPPR3Q6T4P5 718 aa22.69■■□□□ 1.22
CCDC130-207ENST00000587098 DHX29Q7Z478 1369 aaKnown RBP22.67■■□□□ 1.22
CCDC130-207ENST00000587098 FER1L4A9Z1Z3 1794 aa22.67■■□□□ 1.22
CCDC130-207ENST00000587098 TCOF1Q13428 1488 aaKnown RBP22.66■■□□□ 1.22
CCDC130-207ENST00000587098 ADGBQ8N7X0 1667 aa22.65■■□□□ 1.22
CCDC130-207ENST00000587098 PLXNC1O60486 1568 aa22.65■■□□□ 1.22
CCDC130-207ENST00000587098 CEBPAP49715 358 aaPredicted RBP22.64■■□□□ 1.21
CCDC130-207ENST00000587098 GGT6Q6P531 493 aa22.64■■□□□ 1.21
CCDC130-207ENST00000587098 ABCC5O15440 1437 aa22.64■■□□□ 1.21
CCDC130-207ENST00000587098 ESF1Q9H501 851 aaKnown RBP22.63■■□□□ 1.21
CCDC130-207ENST00000587098 FAM50AQ14320 339 aaKnown RBP22.62■■□□□ 1.21
CCDC130-207ENST00000587098 MAST1Q9Y2H9 1570 aa22.62■■□□□ 1.21
CCDC130-207ENST00000587098 KIF3BO15066 747 aa22.6■■□□□ 1.21
CCDC130-207ENST00000587098 DAPK1P53355 1430 aa22.59■■□□□ 1.21
CCDC130-207ENST00000587098 CHIC2Q9UKJ5 165 aa22.57■■□□□ 1.2
CCDC130-207ENST00000587098 PPP6R1Q9UPN7 881 aa22.56■■□□□ 1.2
CCDC130-207ENST00000587098 DNMT1P26358 1616 aaKnown RBP22.56■■□□□ 1.2
CCDC130-207ENST00000587098 RRP7BPQ9NSQ0 103 aa22.55■■□□□ 1.2
CCDC130-207ENST00000587098 CNTLNQ9NXG0 1405 aa22.55■■□□□ 1.2
CCDC130-207ENST00000587098 SHANK2Q9UPX8 1470 aa22.54■■□□□ 1.2
CCDC130-207ENST00000587098 ZMYM3Q14202 1370 aa22.52■■□□□ 1.2
CCDC130-207ENST00000587098 CROCC2H7BZ55 1655 aa22.52■■□□□ 1.2
CCDC130-207ENST00000587098 KIF15Q9NS87 1388 aa22.5■■□□□ 1.19
CCDC130-207ENST00000587098 C3P01024 1663 aa22.49■■□□□ 1.19
CCDC130-207ENST00000587098 SETD1BQ9UPS6 1966 aaKnown RBP22.49■■□□□ 1.19
CCDC130-207ENST00000587098 ANKRD30AQ9BXX3 1397 aa22.48■■□□□ 1.19
CCDC130-207ENST00000587098 DUOX2Q9NRD8 1548 aa22.47■■□□□ 1.19
CCDC130-207ENST00000587098 NCOA1Q15788 1441 aa22.47■■□□□ 1.19
CCDC130-207ENST00000587098 LMTK3Q96Q04 1460 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms