RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 ARHGAP5Q13017 1502 aa27.95■■■□□ 2.06
RETREG3-205ENST00000586870 LRRC9Q6ZRR7 1453 aa27.94■■■□□ 2.06
RETREG3-205ENST00000586870 COL17A1Q9UMD9 1497 aaPredicted RBP27.94■■■□□ 2.06
RETREG3-205ENST00000586870 ZNF777Q9ULD5 760 aaPredicted RBP27.94■■■□□ 2.06
RETREG3-205ENST00000586870 CFDP1Q9UEE9 299 aaPredicted RBP27.93■■■□□ 2.06
RETREG3-205ENST00000586870 RAPGEF3O95398 923 aa27.91■■■□□ 2.06
RETREG3-205ENST00000586870 MYO5CQ9NQX4 1742 aa27.91■■■□□ 2.06
RETREG3-205ENST00000586870 ARAP3Q8WWN8 1544 aa27.91■■■□□ 2.06
RETREG3-205ENST00000586870 CFAP74Q9C0B2 1584 aa27.89■■■□□ 2.06
RETREG3-205ENST00000586870 GPATCH8Q9UKJ3 1502 aaKnown RBP27.87■■■□□ 2.05
RETREG3-205ENST00000586870 NCOA2Q15596 1464 aa27.87■■■□□ 2.05
RETREG3-205ENST00000586870 SCAPERQ9BY12 1400 aa27.86■■■□□ 2.05
RETREG3-205ENST00000586870 DENND4BO75064 1496 aaPredicted RBP27.86■■■□□ 2.05
RETREG3-205ENST00000586870 ADGRL1O94910 1474 aa27.86■■■□□ 2.05
RETREG3-205ENST00000586870 SUPT6HQ7KZ85 1726 aaKnown RBP27.84■■■□□ 2.05
RETREG3-205ENST00000586870 CCER1Q8TC90 406 aaPredicted RBP27.81■■■□□ 2.04
RETREG3-205ENST00000586870 PREX2Q70Z35 1606 aa27.8■■■□□ 2.04
RETREG3-205ENST00000586870 RRBP1Q9P2E9 1410 aaKnown RBP27.79■■■□□ 2.04
RETREG3-205ENST00000586870 MYT1LQ9UL68 1186 aa27.79■■■□□ 2.04
RETREG3-205ENST00000586870 CDC42BPBQ9Y5S2 1711 aa27.76■■■□□ 2.03
RETREG3-205ENST00000586870 CDC42BPAQ5VT25 1732 aa27.76■■■□□ 2.03
RETREG3-205ENST00000586870 HNRNPMP52272 730 aaKnown RBP eCLIP27.74■■■□□ 2.03
RETREG3-205ENST00000586870 AFAP1Q8N556 730 aa27.74■■■□□ 2.03
RETREG3-205ENST00000586870 ZNF644Q9H582 1327 aaPredicted RBP27.72■■■□□ 2.03
RETREG3-205ENST00000586870 POGZQ7Z3K3 1410 aa27.72■■■□□ 2.03
RETREG3-205ENST00000586870 PLEKHH2Q8IVE3 1493 aa27.71■■■□□ 2.03
RETREG3-205ENST00000586870 ITSN2Q9NZM3 1697 aa27.69■■■□□ 2.02
RETREG3-205ENST00000586870 ZNF518AQ6AHZ1 1483 aa27.68■■■□□ 2.02
RETREG3-205ENST00000586870 MYOM3Q5VTT5 1437 aa27.67■■■□□ 2.02
RETREG3-205ENST00000586870 KIAA1107Q9UPP5 1409 aa27.66■■■□□ 2.02
RETREG3-205ENST00000586870 ABCC1P33527 1531 aa27.66■■■□□ 2.02
RETREG3-205ENST00000586870 AEBP2Q6ZN18 517 aaPredicted RBP27.65■■■□□ 2.02
RETREG3-205ENST00000586870 SAMD9LQ8IVG5 1584 aa27.65■■■□□ 2.02
RETREG3-205ENST00000586870 TRAPPC8Q9Y2L5 1435 aa27.65■■■□□ 2.02
RETREG3-205ENST00000586870 ARHGEF12Q9NZN5 1544 aa27.64■■■□□ 2.02
RETREG3-205ENST00000586870 FRMPD1Q5SYB0 1578 aa27.64■■■□□ 2.01
RETREG3-205ENST00000586870 MIA2Q96PC5 1412 aa27.62■■■□□ 2.01
RETREG3-205ENST00000586870 SYCP2Q9BX26 1530 aa27.62■■■□□ 2.01
RETREG3-205ENST00000586870 RSPH4AQ5TD94 716 aa27.61■■■□□ 2.01
RETREG3-205ENST00000586870 RICTORQ6R327 1708 aa27.61■■■□□ 2.01
RETREG3-205ENST00000586870 MAGI2Q86UL8 1455 aa27.6■■■□□ 2.01
RETREG3-205ENST00000586870 SPAG9O60271 1321 aaKnown RBP27.6■■■□□ 2.01
RETREG3-205ENST00000586870 ARID4BQ4LE39 1312 aaPredicted RBP27.59■■■□□ 2.01
RETREG3-205ENST00000586870 CAMSAP2Q08AD1 1489 aa27.58■■■□□ 2.01
RETREG3-205ENST00000586870 ZMYM4Q5VZL5 1548 aa27.57■■■□□ 2
RETREG3-205ENST00000586870 ZFYVE16Q7Z3T8 1539 aa27.56■■■□□ 2
RETREG3-205ENST00000586870 TSPY4P0CV99 314 aa27.56■■■□□ 2
RETREG3-205ENST00000586870 TSPY10P0CW01 314 aa27.56■■■□□ 2
RETREG3-205ENST00000586870 YEATS2Q9ULM3 1422 aa27.55■■■□□ 2
RETREG3-205ENST00000586870 FGD6Q6ZV73 1430 aa27.53■■■□□ 2
RETREG3-205ENST00000586870 MBD5Q9P267 1494 aa27.52■■■□□ 2
RETREG3-205ENST00000586870 FAM50AQ14320 339 aaKnown RBP27.52■■■□□ 2
RETREG3-205ENST00000586870 MLH3Q9UHC1 1453 aa27.52■■■□□ 2
RETREG3-205ENST00000586870 KDM5CP41229 1560 aa27.52■■■□□ 2
RETREG3-205ENST00000586870 ATP10AO60312 1499 aa27.48■■□□□ 1.99
RETREG3-205ENST00000586870 ARHGEF40Q8TER5 1519 aa27.48■■□□□ 1.99
RETREG3-205ENST00000586870 HECW2Q9P2P5 1572 aa27.48■■□□□ 1.99
RETREG3-205ENST00000586870 CCDC141Q6ZP82 1450 aa27.48■■□□□ 1.99
RETREG3-205ENST00000586870 KDM4FA0A1W2PPD8 638 aa27.45■■□□□ 1.98
RETREG3-205ENST00000586870 PTPN23Q9H3S7 1636 aa27.44■■□□□ 1.98
RETREG3-205ENST00000586870 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.44■■□□□ 1.98
RETREG3-205ENST00000586870 C9orf84Q5VXU9 1444 aa27.44■■□□□ 1.98
RETREG3-205ENST00000586870 MLECQ14165 292 aa27.41■■□□□ 1.98
RETREG3-205ENST00000586870 RTEL1-TNFRSF6BF6WH68 1400 aa27.4■■□□□ 1.98
RETREG3-205ENST00000586870 ARHGEF5Q12774 1597 aa27.39■■□□□ 1.98
RETREG3-205ENST00000586870 ATP7AQ04656 1500 aa27.39■■□□□ 1.98
RETREG3-205ENST00000586870 TCOF1Q13428 1488 aaKnown RBP27.39■■□□□ 1.98
RETREG3-205ENST00000586870 DIP2CQ9Y2E4 1556 aa27.36■■□□□ 1.97
RETREG3-205ENST00000586870 KIDINS220Q9ULH0 1771 aa27.35■■□□□ 1.97
RETREG3-205ENST00000586870 ABCC5O15440 1437 aa27.34■■□□□ 1.97
RETREG3-205ENST00000586870 CHIC2Q9UKJ5 165 aa27.34■■□□□ 1.97
RETREG3-205ENST00000586870 ABCA6Q8N139 1617 aa27.33■■□□□ 1.97
RETREG3-205ENST00000586870 CLSPNQ9HAW4 1339 aa27.33■■□□□ 1.97
RETREG3-205ENST00000586870 DAPK1P53355 1430 aa27.32■■□□□ 1.96
RETREG3-205ENST00000586870 INO80Q9ULG1 1556 aaPredicted RBP27.32■■□□□ 1.96
RETREG3-205ENST00000586870 ITGAEP38570 1179 aa27.31■■□□□ 1.96
RETREG3-205ENST00000586870 A2MP01023 1474 aa27.31■■□□□ 1.96
RETREG3-205ENST00000586870 DHX57Q6P158 1386 aaKnown RBP27.28■■□□□ 1.96
RETREG3-205ENST00000586870 ESF1Q9H501 851 aaKnown RBP27.28■■□□□ 1.96
RETREG3-205ENST00000586870 RRP7BPQ9NSQ0 103 aa27.27■■□□□ 1.96
RETREG3-205ENST00000586870 DHX29Q7Z478 1369 aaKnown RBP27.27■■□□□ 1.96
RETREG3-205ENST00000586870 REREQ9P2R6 1566 aa27.25■■□□□ 1.95
RETREG3-205ENST00000586870 SETD5Q9C0A6 1442 aa27.24■■□□□ 1.95
RETREG3-205ENST00000586870 DNMT1P26358 1616 aaKnown RBP27.24■■□□□ 1.95
RETREG3-205ENST00000586870 GGT6Q6P531 493 aa27.23■■□□□ 1.95
RETREG3-205ENST00000586870 ANKRD30AQ9BXX3 1397 aa27.23■■□□□ 1.95
RETREG3-205ENST00000586870 SHANK2Q9UPX8 1470 aa27.23■■□□□ 1.95
RETREG3-205ENST00000586870 KIF3BO15066 747 aa27.23■■□□□ 1.95
RETREG3-205ENST00000586870 MAST1Q9Y2H9 1570 aa27.22■■□□□ 1.95
RETREG3-205ENST00000586870 AGLP35573 1532 aa27.22■■□□□ 1.95
RETREG3-205ENST00000586870 RAB3GAP2Q9H2M9 1393 aa27.2■■□□□ 1.94
RETREG3-205ENST00000586870 BCORL1Q5H9F3 1711 aa27.19■■□□□ 1.94
RETREG3-205ENST00000586870 KIF15Q9NS87 1388 aa27.19■■□□□ 1.94
RETREG3-205ENST00000586870 PLPPR3Q6T4P5 718 aa27.19■■□□□ 1.94
RETREG3-205ENST00000586870 ADGBQ8N7X0 1667 aa27.19■■□□□ 1.94
RETREG3-205ENST00000586870 SIGLEC1Q9BZZ2 1709 aa27.18■■□□□ 1.94
RETREG3-205ENST00000586870 PLXNC1O60486 1568 aa27.13■■□□□ 1.93
RETREG3-205ENST00000586870 NCOA1Q15788 1441 aa27.13■■□□□ 1.93
RETREG3-205ENST00000586870 ADAMTSL3P82987 1691 aa27.13■■□□□ 1.93
RETREG3-205ENST00000586870 CROCC2H7BZ55 1655 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms