RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 ARAP3Q8WWN8 1544 aa33.57■■■□□ 2.96
RETREG3-204ENST00000586796 GPATCH8Q9UKJ3 1502 aaKnown RBP33.55■■■□□ 2.96
RETREG3-204ENST00000586796 PREX2Q70Z35 1606 aa33.54■■■□□ 2.96
RETREG3-204ENST00000586796 CDC42BPAQ5VT25 1732 aa33.54■■■□□ 2.96
RETREG3-204ENST00000586796 SUPT6HQ7KZ85 1726 aaKnown RBP33.54■■■□□ 2.96
RETREG3-204ENST00000586796 CDC42BPBQ9Y5S2 1711 aa33.54■■■□□ 2.96
RETREG3-204ENST00000586796 RAPGEF3O95398 923 aa33.54■■■□□ 2.96
RETREG3-204ENST00000586796 ZNF777Q9ULD5 760 aaPredicted RBP33.54■■■□□ 2.96
RETREG3-204ENST00000586796 NCOA2Q15596 1464 aa33.54■■■□□ 2.96
RETREG3-204ENST00000586796 ADGRL1O94910 1474 aa33.5■■■□□ 2.95
RETREG3-204ENST00000586796 CFDP1Q9UEE9 299 aaPredicted RBP33.5■■■□□ 2.95
RETREG3-204ENST00000586796 SCAPERQ9BY12 1400 aa33.48■■■□□ 2.95
RETREG3-204ENST00000586796 DENND4BO75064 1496 aaPredicted RBP33.48■■■□□ 2.95
RETREG3-204ENST00000586796 ITSN2Q9NZM3 1697 aa33.39■■■□□ 2.94
RETREG3-204ENST00000586796 PPARGC1BQ86YN6 1023 aaKnown RBP33.38■■■□□ 2.93
RETREG3-204ENST00000586796 FRMPD1Q5SYB0 1578 aa33.38■■■□□ 2.93
RETREG3-204ENST00000586796 ZNF644Q9H582 1327 aaPredicted RBP33.36■■■□□ 2.93
RETREG3-204ENST00000586796 SAMD9LQ8IVG5 1584 aa33.36■■■□□ 2.93
RETREG3-204ENST00000586796 POGZQ7Z3K3 1410 aa33.35■■■□□ 2.93
RETREG3-204ENST00000586796 ABCC1P33527 1531 aa33.34■■■□□ 2.93
RETREG3-204ENST00000586796 RICTORQ6R327 1708 aa33.34■■■□□ 2.93
RETREG3-204ENST00000586796 HNRNPMP52272 730 aaKnown RBP eCLIP33.33■■■□□ 2.93
RETREG3-204ENST00000586796 AFAP1Q8N556 730 aa33.33■■■□□ 2.93
RETREG3-204ENST00000586796 ARHGEF12Q9NZN5 1544 aa33.33■■■□□ 2.93
RETREG3-204ENST00000586796 MYOM3Q5VTT5 1437 aa33.28■■■□□ 2.92
RETREG3-204ENST00000586796 TRAPPC8Q9Y2L5 1435 aa33.28■■■□□ 2.92
RETREG3-204ENST00000586796 SYCP2Q9BX26 1530 aa33.28■■■□□ 2.92
RETREG3-204ENST00000586796 MYT1LQ9UL68 1186 aa33.28■■■□□ 2.92
RETREG3-204ENST00000586796 ZNF518AQ6AHZ1 1483 aa33.27■■■□□ 2.92
RETREG3-204ENST00000586796 PLEKHH2Q8IVE3 1493 aa33.26■■■□□ 2.92
RETREG3-204ENST00000586796 KIAA1107Q9UPP5 1409 aa33.23■■■□□ 2.91
RETREG3-204ENST00000586796 CAMSAP2Q08AD1 1489 aa33.22■■■□□ 2.91
RETREG3-204ENST00000586796 ZMYM4Q5VZL5 1548 aa33.22■■■□□ 2.91
RETREG3-204ENST00000586796 MIA2Q96PC5 1412 aa33.19■■■□□ 2.9
RETREG3-204ENST00000586796 YEATS2Q9ULM3 1422 aa33.19■■■□□ 2.9
RETREG3-204ENST00000586796 ZFYVE16Q7Z3T8 1539 aa33.18■■■□□ 2.9
RETREG3-204ENST00000586796 KDM5CP41229 1560 aa33.17■■■□□ 2.9
RETREG3-204ENST00000586796 MAGI2Q86UL8 1455 aa33.16■■■□□ 2.9
RETREG3-204ENST00000586796 MBD5Q9P267 1494 aa33.14■■■□□ 2.9
RETREG3-204ENST00000586796 SPAG9O60271 1321 aaKnown RBP33.13■■■□□ 2.89
RETREG3-204ENST00000586796 ARHGEF40Q8TER5 1519 aa33.12■■■□□ 2.89
RETREG3-204ENST00000586796 FGD6Q6ZV73 1430 aa33.11■■■□□ 2.89
RETREG3-204ENST00000586796 HECW2Q9P2P5 1572 aa33.11■■■□□ 2.89
RETREG3-204ENST00000586796 MLH3Q9UHC1 1453 aa33.09■■■□□ 2.89
RETREG3-204ENST00000586796 PTPN23Q9H3S7 1636 aa33.08■■■□□ 2.89
RETREG3-204ENST00000586796 ARID4BQ4LE39 1312 aaPredicted RBP33.07■■■□□ 2.88
RETREG3-204ENST00000586796 CCDC141Q6ZP82 1450 aa33.05■■■□□ 2.88
RETREG3-204ENST00000586796 RSPH4AQ5TD94 716 aa33.05■■■□□ 2.88
RETREG3-204ENST00000586796 FAM50AQ14320 339 aaKnown RBP33.03■■■□□ 2.88
RETREG3-204ENST00000586796 ATP10AO60312 1499 aa33.03■■■□□ 2.88
RETREG3-204ENST00000586796 KIDINS220Q9ULH0 1771 aa33.01■■■□□ 2.88
RETREG3-204ENST00000586796 TSPY4P0CV99 314 aa33.01■■■□□ 2.87
RETREG3-204ENST00000586796 TSPY10P0CW01 314 aa33.01■■■□□ 2.87
RETREG3-204ENST00000586796 ARHGEF5Q12774 1597 aa33■■■□□ 2.87
RETREG3-204ENST00000586796 ATP7AQ04656 1500 aa33■■■□□ 2.87
RETREG3-204ENST00000586796 DIP2CQ9Y2E4 1556 aa33■■■□□ 2.87
RETREG3-204ENST00000586796 ABCA6Q8N139 1617 aa32.99■■■□□ 2.87
RETREG3-204ENST00000586796 C9orf84Q5VXU9 1444 aa32.99■■■□□ 2.87
RETREG3-204ENST00000586796 TCOF1Q13428 1488 aaKnown RBP32.99■■■□□ 2.87
RETREG3-204ENST00000586796 INO80Q9ULG1 1556 aaPredicted RBP32.96■■■□□ 2.87
RETREG3-204ENST00000586796 KDM4FA0A1W2PPD8 638 aa32.95■■■□□ 2.87
RETREG3-204ENST00000586796 RTEL1-TNFRSF6BF6WH68 1400 aa32.92■■■□□ 2.86
RETREG3-204ENST00000586796 SIGLEC1Q9BZZ2 1709 aa32.91■■■□□ 2.86
RETREG3-204ENST00000586796 MLECQ14165 292 aa32.91■■■□□ 2.86
RETREG3-204ENST00000586796 ABCC5O15440 1437 aa32.9■■■□□ 2.86
RETREG3-204ENST00000586796 DAPK1P53355 1430 aa32.87■■■□□ 2.85
RETREG3-204ENST00000586796 DNMT1P26358 1616 aaKnown RBP32.84■■■□□ 2.85
RETREG3-204ENST00000586796 CHIC2Q9UKJ5 165 aa32.84■■■□□ 2.85
RETREG3-204ENST00000586796 A2MP01023 1474 aa32.84■■■□□ 2.85
RETREG3-204ENST00000586796 REREQ9P2R6 1566 aa32.83■■■□□ 2.85
RETREG3-204ENST00000586796 BCORL1Q5H9F3 1711 aa32.81■■■□□ 2.84
RETREG3-204ENST00000586796 MAST1Q9Y2H9 1570 aa32.81■■■□□ 2.84
RETREG3-204ENST00000586796 ITGAEP38570 1179 aa32.8■■■□□ 2.84
RETREG3-204ENST00000586796 CROCC2H7BZ55 1655 aa32.79■■■□□ 2.84
RETREG3-204ENST00000586796 AEBP2Q6ZN18 517 aaPredicted RBP32.79■■■□□ 2.84
RETREG3-204ENST00000586796 ADGBQ8N7X0 1667 aa32.78■■■□□ 2.84
RETREG3-204ENST00000586796 SHANK2Q9UPX8 1470 aa32.77■■■□□ 2.84
RETREG3-204ENST00000586796 RRP7BPQ9NSQ0 103 aa32.76■■■□□ 2.83
RETREG3-204ENST00000586796 DHX29Q7Z478 1369 aaKnown RBP32.75■■■□□ 2.83
RETREG3-204ENST00000586796 AGLP35573 1532 aa32.75■■■□□ 2.83
RETREG3-204ENST00000586796 RRBP1Q9P2E9 1410 aaKnown RBP32.74■■■□□ 2.83
RETREG3-204ENST00000586796 ADAMTSL3P82987 1691 aa32.73■■■□□ 2.83
RETREG3-204ENST00000586796 PLXNC1O60486 1568 aa32.72■■■□□ 2.83
RETREG3-204ENST00000586796 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.7■■■□□ 2.82
RETREG3-204ENST00000586796 MADDQ8WXG6 1647 aa32.69■■■□□ 2.82
RETREG3-204ENST00000586796 ANKRD30AQ9BXX3 1397 aa32.69■■■□□ 2.82
RETREG3-204ENST00000586796 KIF15Q9NS87 1388 aa32.69■■■□□ 2.82
RETREG3-204ENST00000586796 KIF3BO15066 747 aa32.68■■■□□ 2.82
RETREG3-204ENST00000586796 GGT6Q6P531 493 aa32.68■■■□□ 2.82
RETREG3-204ENST00000586796 PTPRKQ15262 1439 aa32.68■■■□□ 2.82
RETREG3-204ENST00000586796 PLPPR3Q6T4P5 718 aa32.65■■■□□ 2.82
RETREG3-204ENST00000586796 ESF1Q9H501 851 aaKnown RBP32.64■■■□□ 2.82
RETREG3-204ENST00000586796 NCOA1Q15788 1441 aa32.63■■■□□ 2.81
RETREG3-204ENST00000586796 RIMS1Q86UR5 1692 aaKnown RBP32.62■■■□□ 2.81
RETREG3-204ENST00000586796 DUOX2Q9NRD8 1548 aa32.61■■■□□ 2.81
RETREG3-204ENST00000586796 FER1L4A9Z1Z3 1794 aa32.6■■■□□ 2.81
RETREG3-204ENST00000586796 ADGRL2O95490 1459 aa32.6■■■□□ 2.81
RETREG3-204ENST00000586796 PTPRMP28827 1452 aa32.58■■■□□ 2.81
RETREG3-204ENST00000586796 ERBINQ96RT1 1412 aa32.51■■■□□ 2.8
RETREG3-204ENST00000586796 ROCK1Q13464 1354 aa32.51■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms