RNA–Protein interactions for RNA: ENST00000586275.1

PDE4A-205, Transcript of phosphodiesterase 4A, humanhuman

TSL 3

Gene PDE4A, Length 695 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-205ENST00000586275 ADAMTSL3P82987 1691 aa34.09■■■■□ 3.05
PDE4A-205ENST00000586275 MYO5CQ9NQX4 1742 aa34.09■■■■□ 3.05
PDE4A-205ENST00000586275 FYCO1Q9BQS8 1478 aa34.08■■■■□ 3.05
PDE4A-205ENST00000586275 YEATS2Q9ULM3 1422 aa34.08■■■■□ 3.05
PDE4A-205ENST00000586275 ZFYVE16Q7Z3T8 1539 aa34.07■■■■□ 3.04
PDE4A-205ENST00000586275 HECW2Q9P2P5 1572 aa34.06■■■■□ 3.04
PDE4A-205ENST00000586275 PTPRMP28827 1452 aa34.06■■■■□ 3.04
PDE4A-205ENST00000586275 ARHGAP5Q13017 1502 aa34.05■■■■□ 3.04
PDE4A-205ENST00000586275 BCORL1Q5H9F3 1711 aa34.04■■■■□ 3.04
PDE4A-205ENST00000586275 ZNF518AQ6AHZ1 1483 aa33.96■■■■□ 3.03
PDE4A-205ENST00000586275 MADDQ8WXG6 1647 aa33.95■■■■□ 3.03
PDE4A-205ENST00000586275 AFAP1Q8N556 730 aa33.95■■■■□ 3.03
PDE4A-205ENST00000586275 ATP10AO60312 1499 aa33.93■■■■□ 3.02
PDE4A-205ENST00000586275 PREX2Q70Z35 1606 aa33.88■■■■□ 3.01
PDE4A-205ENST00000586275 C9orf84Q5VXU9 1444 aa33.87■■■■□ 3.01
PDE4A-205ENST00000586275 CDC42BPBQ9Y5S2 1711 aa33.87■■■■□ 3.01
PDE4A-205ENST00000586275 MLECQ14165 292 aa33.87■■■■□ 3.01
PDE4A-205ENST00000586275 KDM5CP41229 1560 aa33.86■■■■□ 3.01
PDE4A-205ENST00000586275 SIGLEC1Q9BZZ2 1709 aa33.85■■■■□ 3.01
PDE4A-205ENST00000586275 MYT1LQ9UL68 1186 aa33.85■■■■□ 3.01
PDE4A-205ENST00000586275 CEP162Q5TB80 1403 aa33.84■■■■□ 3.01
PDE4A-205ENST00000586275 ARHGEF12Q9NZN5 1544 aa33.81■■■■□ 3
PDE4A-205ENST00000586275 RIMS1Q86UR5 1692 aaKnown RBP33.8■■■■□ 3
PDE4A-205ENST00000586275 TRAPPC8Q9Y2L5 1435 aa33.8■■■■□ 3
PDE4A-205ENST00000586275 ABCC1P33527 1531 aa33.8■■■■□ 3
PDE4A-205ENST00000586275 MLH3Q9UHC1 1453 aa33.79■■■■□ 3
PDE4A-205ENST00000586275 ZNF777Q9ULD5 760 aaPredicted RBP33.78■■■■□ 3
PDE4A-205ENST00000586275 GPATCH8Q9UKJ3 1502 aaKnown RBP33.78■■■■□ 3
PDE4A-205ENST00000586275 MTUS2Q5JR59 1369 aa33.77■■■■□ 3
PDE4A-205ENST00000586275 CDC42BPAQ5VT25 1732 aa33.75■■■□□ 2.99
PDE4A-205ENST00000586275 PLPPR3Q6T4P5 718 aa33.74■■■□□ 2.99
PDE4A-205ENST00000586275 CCNB3Q8WWL7 1395 aa33.72■■■□□ 2.99
PDE4A-205ENST00000586275 CFDP1Q9UEE9 299 aaPredicted RBP33.71■■■□□ 2.99
PDE4A-205ENST00000586275 DIP2CQ9Y2E4 1556 aa33.71■■■□□ 2.99
PDE4A-205ENST00000586275 ITSN2Q9NZM3 1697 aa33.7■■■□□ 2.99
PDE4A-205ENST00000586275 LMTK3Q96Q04 1460 aa33.68■■■□□ 2.98
PDE4A-205ENST00000586275 LOC105371045A0A1W2PR82 267 aa33.67■■■□□ 2.98
PDE4A-205ENST00000586275 REREQ9P2R6 1566 aa33.67■■■□□ 2.98
PDE4A-205ENST00000586275 HNRNPMP52272 730 aaKnown RBP eCLIP33.66■■■□□ 2.98
PDE4A-205ENST00000586275 SAMD9LQ8IVG5 1584 aa33.66■■■□□ 2.98
PDE4A-205ENST00000586275 ABCA6Q8N139 1617 aa33.64■■■□□ 2.98
PDE4A-205ENST00000586275 KIAA1107Q9UPP5 1409 aa33.63■■■□□ 2.97
PDE4A-205ENST00000586275 FER1L4A9Z1Z3 1794 aa33.63■■■□□ 2.97
PDE4A-205ENST00000586275 SYCP2Q9BX26 1530 aa33.62■■■□□ 2.97
PDE4A-205ENST00000586275 PLEKHH2Q8IVE3 1493 aa33.62■■■□□ 2.97
PDE4A-205ENST00000586275 EHBP1L1Q8N3D4 1523 aa33.61■■■□□ 2.97
PDE4A-205ENST00000586275 SPAG9O60271 1321 aaKnown RBP33.6■■■□□ 2.97
PDE4A-205ENST00000586275 ILDR1Q86SU0 546 aaPredicted RBP33.59■■■□□ 2.97
PDE4A-205ENST00000586275 AGLP35573 1532 aa33.58■■■□□ 2.97
PDE4A-205ENST00000586275 KIDINS220Q9ULH0 1771 aa33.57■■■□□ 2.96
PDE4A-205ENST00000586275 CEBPAP49715 358 aaPredicted RBP33.56■■■□□ 2.96
PDE4A-205ENST00000586275 HSPA2P54652 639 aa33.55■■■□□ 2.96
PDE4A-205ENST00000586275 TIAM1Q13009 1591 aa33.52■■■□□ 2.96
PDE4A-205ENST00000586275 ZNF644Q9H582 1327 aaPredicted RBP33.52■■■□□ 2.96
PDE4A-205ENST00000586275 ESF1Q9H501 851 aaKnown RBP33.51■■■□□ 2.95
PDE4A-205ENST00000586275 VPS8Q8N3P4 1428 aa33.48■■■□□ 2.95
PDE4A-205ENST00000586275 ATP7AQ04656 1500 aa33.46■■■□□ 2.95
PDE4A-205ENST00000586275 NCOA2Q15596 1464 aa33.44■■■□□ 2.94
PDE4A-205ENST00000586275 MBD5Q9P267 1494 aa33.43■■■□□ 2.94
PDE4A-205ENST00000586275 INO80Q9ULG1 1556 aaPredicted RBP33.41■■■□□ 2.94
PDE4A-205ENST00000586275 CNTLNQ9NXG0 1405 aa33.4■■■□□ 2.94
PDE4A-205ENST00000586275 A2MP01023 1474 aa33.38■■■□□ 2.93
PDE4A-205ENST00000586275 SUPT6HQ7KZ85 1726 aaKnown RBP33.36■■■□□ 2.93
PDE4A-205ENST00000586275 PREX1Q8TCU6 1659 aa33.35■■■□□ 2.93
PDE4A-205ENST00000586275 UHRF1BP1Q6BDS2 1440 aa33.35■■■□□ 2.93
PDE4A-205ENST00000586275 LRRC9Q6ZRR7 1453 aa33.34■■■□□ 2.93
PDE4A-205ENST00000586275 RTEL1-TNFRSF6BF6WH68 1400 aa33.33■■■□□ 2.93
PDE4A-205ENST00000586275 PLXNC1O60486 1568 aa33.32■■■□□ 2.92
PDE4A-205ENST00000586275 RSPH4AQ5TD94 716 aa33.31■■■□□ 2.92
PDE4A-205ENST00000586275 C3P01024 1663 aa33.29■■■□□ 2.92
PDE4A-205ENST00000586275 CAMSAP2Q08AD1 1489 aa33.29■■■□□ 2.92
PDE4A-205ENST00000586275 MAP3K1Q13233 1512 aa33.28■■■□□ 2.92
PDE4A-205ENST00000586275 GGT6Q6P531 493 aa33.27■■■□□ 2.92
PDE4A-205ENST00000586275 CCDC141Q6ZP82 1450 aa33.26■■■□□ 2.92
PDE4A-205ENST00000586275 ZMYM3Q14202 1370 aa33.26■■■□□ 2.92
PDE4A-205ENST00000586275 KANK4Q5T7N3 995 aaPredicted RBP33.26■■■□□ 2.91
PDE4A-205ENST00000586275 FBXO41Q8TF61 875 aa33.24■■■□□ 2.91
PDE4A-205ENST00000586275 PPP6R1Q9UPN7 881 aa33.24■■■□□ 2.91
PDE4A-205ENST00000586275 DHX29Q7Z478 1369 aaKnown RBP33.23■■■□□ 2.91
PDE4A-205ENST00000586275 SETD1BQ9UPS6 1966 aaKnown RBP33.23■■■□□ 2.91
PDE4A-205ENST00000586275 ADGBQ8N7X0 1667 aa33.22■■■□□ 2.91
PDE4A-205ENST00000586275 NPATQ14207 1427 aa33.2■■■□□ 2.91
PDE4A-205ENST00000586275 DMRT2Q9Y5R5 561 aa33.19■■■□□ 2.9
PDE4A-205ENST00000586275 MROH2AA6NES4 1674 aa33.19■■■□□ 2.9
PDE4A-205ENST00000586275 TSPY4P0CV99 314 aa33.18■■■□□ 2.9
PDE4A-205ENST00000586275 TSPY10P0CW01 314 aa33.18■■■□□ 2.9
PDE4A-205ENST00000586275 ARHGEF5Q12774 1597 aa33.14■■■□□ 2.9
PDE4A-205ENST00000586275 APLP2Q06481 763 aa33.13■■■□□ 2.89
PDE4A-205ENST00000586275 KIF3BO15066 747 aa33.12■■■□□ 2.89
PDE4A-205ENST00000586275 CLTCQ00610 1675 aaKnown RBP33.11■■■□□ 2.89
PDE4A-205ENST00000586275 MYOM3Q5VTT5 1437 aa33.11■■■□□ 2.89
PDE4A-205ENST00000586275 MIA2Q96PC5 1412 aa33.11■■■□□ 2.89
PDE4A-205ENST00000586275 PTPRKQ15262 1439 aa33.08■■■□□ 2.89
PDE4A-205ENST00000586275 STRCQ7RTU9 1775 aa33.06■■■□□ 2.88
PDE4A-205ENST00000586275 CERKQ8TCT0 537 aa33.06■■■□□ 2.88
PDE4A-205ENST00000586275 PTPRTO14522 1441 aa33.02■■■□□ 2.88
PDE4A-205ENST00000586275 NCOA1Q15788 1441 aa33.01■■■□□ 2.87
PDE4A-205ENST00000586275 WASHC2CQ9Y4E1 1318 aa32.99■■■□□ 2.87
PDE4A-205ENST00000586275 MAST1Q9Y2H9 1570 aa32.97■■■□□ 2.87
PDE4A-205ENST00000586275 FAM135AQ9P2D6 1515 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms