RNA–Protein interactions for RNA: ENST00000586237.1

PKN1-206, Transcript of protein kinase N1, humanhuman

TSL 5

Gene PKN1, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-206ENST00000586237 FANCAO15360 1455 aa23.49■■□□□ 1.35
PKN1-206ENST00000586237 CFDP1Q9UEE9 299 aaPredicted RBP23.49■■□□□ 1.35
PKN1-206ENST00000586237 PREX2Q70Z35 1606 aa23.48■■□□□ 1.35
PKN1-206ENST00000586237 PHLDB1Q86UU1 1377 aa23.48■■□□□ 1.35
PKN1-206ENST00000586237 AKNAQ7Z591 1439 aa23.45■■□□□ 1.34
PKN1-206ENST00000586237 ARAP3Q8WWN8 1544 aa23.44■■□□□ 1.34
PKN1-206ENST00000586237 NEO1Q92859 1461 aa23.44■■□□□ 1.34
PKN1-206ENST00000586237 ZNF644Q9H582 1327 aaPredicted RBP23.44■■□□□ 1.34
PKN1-206ENST00000586237 COL17A1Q9UMD9 1497 aaPredicted RBP23.43■■□□□ 1.34
PKN1-206ENST00000586237 MYOM3Q5VTT5 1437 aa23.42■■□□□ 1.34
PKN1-206ENST00000586237 ITSN2Q9NZM3 1697 aa23.41■■□□□ 1.34
PKN1-206ENST00000586237 CFAP74Q9C0B2 1584 aa23.39■■□□□ 1.33
PKN1-206ENST00000586237 ADGRL1O94910 1474 aa23.38■■□□□ 1.33
PKN1-206ENST00000586237 RAPGEF3O95398 923 aa23.38■■□□□ 1.33
PKN1-206ENST00000586237 SCAPERQ9BY12 1400 aa23.38■■□□□ 1.33
PKN1-206ENST00000586237 SAMD9LQ8IVG5 1584 aa23.37■■□□□ 1.33
PKN1-206ENST00000586237 HNRNPMP52272 730 aaKnown RBP eCLIP23.36■■□□□ 1.33
PKN1-206ENST00000586237 KDM6BO15054 1643 aa23.36■■□□□ 1.33
PKN1-206ENST00000586237 ARHGEF12Q9NZN5 1544 aa23.35■■□□□ 1.33
PKN1-206ENST00000586237 FGD6Q6ZV73 1430 aa23.33■■□□□ 1.33
PKN1-206ENST00000586237 MIA2Q96PC5 1412 aa23.33■■□□□ 1.32
PKN1-206ENST00000586237 DENND4BO75064 1496 aaPredicted RBP23.32■■□□□ 1.32
PKN1-206ENST00000586237 ABCC1P33527 1531 aa23.32■■□□□ 1.32
PKN1-206ENST00000586237 CAMSAP2Q08AD1 1489 aa23.31■■□□□ 1.32
PKN1-206ENST00000586237 AFAP1Q8N556 730 aa23.31■■□□□ 1.32
PKN1-206ENST00000586237 SYCP2Q9BX26 1530 aa23.3■■□□□ 1.32
PKN1-206ENST00000586237 TRAPPC8Q9Y2L5 1435 aa23.3■■□□□ 1.32
PKN1-206ENST00000586237 PTPN23Q9H3S7 1636 aa23.29■■□□□ 1.32
PKN1-206ENST00000586237 FAM50AQ14320 339 aaKnown RBP23.28■■□□□ 1.32
PKN1-206ENST00000586237 KIAA1107Q9UPP5 1409 aa23.27■■□□□ 1.32
PKN1-206ENST00000586237 PLEKHH2Q8IVE3 1493 aa23.27■■□□□ 1.32
PKN1-206ENST00000586237 POGZQ7Z3K3 1410 aa23.26■■□□□ 1.31
PKN1-206ENST00000586237 FRMPD1Q5SYB0 1578 aa23.26■■□□□ 1.31
PKN1-206ENST00000586237 RICTORQ6R327 1708 aa23.25■■□□□ 1.31
PKN1-206ENST00000586237 MBD5Q9P267 1494 aa23.25■■□□□ 1.31
PKN1-206ENST00000586237 TCOF1Q13428 1488 aaKnown RBP23.23■■□□□ 1.31
PKN1-206ENST00000586237 MYT1LQ9UL68 1186 aa23.21■■□□□ 1.31
PKN1-206ENST00000586237 ZNF518AQ6AHZ1 1483 aa23.2■■□□□ 1.3
PKN1-206ENST00000586237 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
PKN1-206ENST00000586237 SPAG9O60271 1321 aaKnown RBP23.16■■□□□ 1.3
PKN1-206ENST00000586237 CCDC141Q6ZP82 1450 aa23.16■■□□□ 1.3
PKN1-206ENST00000586237 KDM5CP41229 1560 aa23.15■■□□□ 1.3
PKN1-206ENST00000586237 ARHGEF5Q12774 1597 aa23.15■■□□□ 1.3
PKN1-206ENST00000586237 ITGAEP38570 1179 aa23.15■■□□□ 1.3
PKN1-206ENST00000586237 RSPH4AQ5TD94 716 aa23.15■■□□□ 1.3
PKN1-206ENST00000586237 ABCC5O15440 1437 aa23.15■■□□□ 1.3
PKN1-206ENST00000586237 YEATS2Q9ULM3 1422 aa23.14■■□□□ 1.29
PKN1-206ENST00000586237 ZMYM4Q5VZL5 1548 aa23.13■■□□□ 1.29
PKN1-206ENST00000586237 TSPY4P0CV99 314 aa23.13■■□□□ 1.29
PKN1-206ENST00000586237 TSPY10P0CW01 314 aa23.13■■□□□ 1.29
PKN1-206ENST00000586237 DAPK1P53355 1430 aa23.12■■□□□ 1.29
PKN1-206ENST00000586237 CHIC2Q9UKJ5 165 aa23.12■■□□□ 1.29
PKN1-206ENST00000586237 DNMT1P26358 1616 aaKnown RBP23.1■■□□□ 1.29
PKN1-206ENST00000586237 MLH3Q9UHC1 1453 aa23.1■■□□□ 1.29
PKN1-206ENST00000586237 HECW2Q9P2P5 1572 aa23.1■■□□□ 1.29
PKN1-206ENST00000586237 ZFYVE16Q7Z3T8 1539 aa23.09■■□□□ 1.29
PKN1-206ENST00000586237 KIDINS220Q9ULH0 1771 aa23.09■■□□□ 1.29
PKN1-206ENST00000586237 MAGI2Q86UL8 1455 aa23.08■■□□□ 1.29
PKN1-206ENST00000586237 PTPRKQ15262 1439 aa23.08■■□□□ 1.28
PKN1-206ENST00000586237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.07■■□□□ 1.28
PKN1-206ENST00000586237 ATP7AQ04656 1500 aa23.07■■□□□ 1.28
PKN1-206ENST00000586237 C9orf84Q5VXU9 1444 aa23.07■■□□□ 1.28
PKN1-206ENST00000586237 INO80Q9ULG1 1556 aaPredicted RBP23.06■■□□□ 1.28
PKN1-206ENST00000586237 CROCC2H7BZ55 1655 aa23.04■■□□□ 1.28
PKN1-206ENST00000586237 ABCA6Q8N139 1617 aa23.04■■□□□ 1.28
PKN1-206ENST00000586237 ARHGEF40Q8TER5 1519 aa23.03■■□□□ 1.28
PKN1-206ENST00000586237 RTEL1-TNFRSF6BF6WH68 1400 aa23.03■■□□□ 1.28
PKN1-206ENST00000586237 DIP2CQ9Y2E4 1556 aa23.02■■□□□ 1.28
PKN1-206ENST00000586237 MAST1Q9Y2H9 1570 aa23.01■■□□□ 1.27
PKN1-206ENST00000586237 ATP10AO60312 1499 aa23.01■■□□□ 1.27
PKN1-206ENST00000586237 RRP7BPQ9NSQ0 103 aa23.01■■□□□ 1.27
PKN1-206ENST00000586237 SHANK2Q9UPX8 1470 aa23■■□□□ 1.27
PKN1-206ENST00000586237 ARID4BQ4LE39 1312 aaPredicted RBP22.97■■□□□ 1.27
PKN1-206ENST00000586237 SIGLEC1Q9BZZ2 1709 aa22.96■■□□□ 1.27
PKN1-206ENST00000586237 ANKRD30AQ9BXX3 1397 aa22.95■■□□□ 1.26
PKN1-206ENST00000586237 ADGBQ8N7X0 1667 aa22.94■■□□□ 1.26
PKN1-206ENST00000586237 A2MP01023 1474 aa22.94■■□□□ 1.26
PKN1-206ENST00000586237 NCOA1Q15788 1441 aa22.94■■□□□ 1.26
PKN1-206ENST00000586237 KIF15Q9NS87 1388 aa22.93■■□□□ 1.26
PKN1-206ENST00000586237 ADGRL2O95490 1459 aa22.92■■□□□ 1.26
PKN1-206ENST00000586237 DHX29Q7Z478 1369 aaKnown RBP22.92■■□□□ 1.26
PKN1-206ENST00000586237 PLXNC1O60486 1568 aa22.92■■□□□ 1.26
PKN1-206ENST00000586237 MLECQ14165 292 aa22.91■■□□□ 1.26
PKN1-206ENST00000586237 REREQ9P2R6 1566 aa22.88■■□□□ 1.25
PKN1-206ENST00000586237 ROCK1Q13464 1354 aa22.88■■□□□ 1.25
PKN1-206ENST00000586237 KIF3BO15066 747 aa22.86■■□□□ 1.25
PKN1-206ENST00000586237 DUOX2Q9NRD8 1548 aa22.86■■□□□ 1.25
PKN1-206ENST00000586237 AGLP35573 1532 aa22.83■■□□□ 1.25
PKN1-206ENST00000586237 GGT6Q6P531 493 aa22.83■■□□□ 1.25
PKN1-206ENST00000586237 TRIM26Q12899 539 aaPredicted RBP22.82■■□□□ 1.24
PKN1-206ENST00000586237 ANKRD50Q9ULJ7 1429 aa22.81■■□□□ 1.24
PKN1-206ENST00000586237 NAIPQ13075 1403 aa22.8■■□□□ 1.24
PKN1-206ENST00000586237 BCORL1Q5H9F3 1711 aa22.78■■□□□ 1.24
PKN1-206ENST00000586237 ERBINQ96RT1 1412 aa22.78■■□□□ 1.24
PKN1-206ENST00000586237 KDM4FA0A1W2PPD8 638 aa22.77■■□□□ 1.24
PKN1-206ENST00000586237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.77■■□□□ 1.244e-7■□□□□ 9.3
PKN1-206ENST00000586237 HFM1A2PYH4 1435 aa22.75■■□□□ 1.23
PKN1-206ENST00000586237 EIF2AK4Q9P2K8 1649 aaKnown RBP22.74■■□□□ 1.23
PKN1-206ENST00000586237 GCC2Q8IWJ2 1684 aa22.72■■□□□ 1.23
PKN1-206ENST00000586237 ADAMTSL3P82987 1691 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms