RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 POGZQ7Z3K3 1410 aa32.97■■■□□ 2.87
CLPTM1-204ENST00000585961 ZFYVE16Q7Z3T8 1539 aa32.97■■■□□ 2.87
CLPTM1-204ENST00000585961 AFAP1Q8N556 730 aa32.96■■■□□ 2.87
CLPTM1-204ENST00000585961 HECW1Q76N89 1606 aa32.95■■■□□ 2.86
CLPTM1-204ENST00000585961 RIMS1Q86UR5 1692 aaKnown RBP32.93■■■□□ 2.86
CLPTM1-204ENST00000585961 MAGI2Q86UL8 1455 aa32.93■■■□□ 2.86
CLPTM1-204ENST00000585961 ZMYM4Q5VZL5 1548 aa32.91■■■□□ 2.86
CLPTM1-204ENST00000585961 TROQ12816 1431 aaPredicted RBP32.9■■■□□ 2.86
CLPTM1-204ENST00000585961 LMTK3Q96Q04 1460 aa32.89■■■□□ 2.86
CLPTM1-204ENST00000585961 FBXO41Q8TF61 875 aa32.88■■■□□ 2.85
CLPTM1-204ENST00000585961 SIGLEC1Q9BZZ2 1709 aa32.88■■■□□ 2.85
CLPTM1-204ENST00000585961 KIF14Q15058 1648 aa32.87■■■□□ 2.85
CLPTM1-204ENST00000585961 PCF11O94913 1555 aaKnown RBP32.87■■■□□ 2.85
CLPTM1-204ENST00000585961 CEBPAP49715 358 aaPredicted RBP32.86■■■□□ 2.85
CLPTM1-204ENST00000585961 ATP10AO60312 1499 aa32.86■■■□□ 2.85
CLPTM1-204ENST00000585961 CLIP1P30622 1438 aa32.84■■■□□ 2.85
CLPTM1-204ENST00000585961 ARHGAP5Q13017 1502 aa32.82■■■□□ 2.84
CLPTM1-204ENST00000585961 MYO5CQ9NQX4 1742 aa32.79■■■□□ 2.84
CLPTM1-204ENST00000585961 C9orf84Q5VXU9 1444 aa32.77■■■□□ 2.84
CLPTM1-204ENST00000585961 LRRIQ1Q96JM4 1722 aa32.72■■■□□ 2.83
CLPTM1-204ENST00000585961 CASKIN1Q8WXD9 1431 aa32.72■■■□□ 2.83
CLPTM1-204ENST00000585961 ZNF777Q9ULD5 760 aaPredicted RBP32.72■■■□□ 2.83
CLPTM1-204ENST00000585961 ZNF518AQ6AHZ1 1483 aa32.72■■■□□ 2.83
CLPTM1-204ENST00000585961 TRAPPC8Q9Y2L5 1435 aa32.67■■■□□ 2.82
CLPTM1-204ENST00000585961 ARHGEF12Q9NZN5 1544 aa32.66■■■□□ 2.82
CLPTM1-204ENST00000585961 FER1L4A9Z1Z3 1794 aa32.65■■■□□ 2.82
CLPTM1-204ENST00000585961 CCDC18Q5T9S5 1454 aa32.61■■■□□ 2.81
CLPTM1-204ENST00000585961 CDC42BPBQ9Y5S2 1711 aa32.61■■■□□ 2.81
CLPTM1-204ENST00000585961 HNRNPMP52272 730 aaKnown RBP eCLIP32.6■■■□□ 2.81
CLPTM1-204ENST00000585961 ESF1Q9H501 851 aaKnown RBP32.6■■■□□ 2.81
CLPTM1-204ENST00000585961 KDM5CP41229 1560 aa32.58■■■□□ 2.81
CLPTM1-204ENST00000585961 MLH3Q9UHC1 1453 aa32.56■■■□□ 2.8
CLPTM1-204ENST00000585961 CERKQ8TCT0 537 aa32.56■■■□□ 2.8
CLPTM1-204ENST00000585961 DIP2CQ9Y2E4 1556 aa32.53■■■□□ 2.8
CLPTM1-204ENST00000585961 FYCO1Q9BQS8 1478 aa32.5■■■□□ 2.79
CLPTM1-204ENST00000585961 PREX2Q70Z35 1606 aa32.49■■■□□ 2.79
CLPTM1-204ENST00000585961 CFDP1Q9UEE9 299 aaPredicted RBP32.49■■■□□ 2.79
CLPTM1-204ENST00000585961 ABCC1P33527 1531 aa32.49■■■□□ 2.79
CLPTM1-204ENST00000585961 SPAG9O60271 1321 aaKnown RBP32.48■■■□□ 2.79
CLPTM1-204ENST00000585961 ABCA6Q8N139 1617 aa32.47■■■□□ 2.79
CLPTM1-204ENST00000585961 GPATCH8Q9UKJ3 1502 aaKnown RBP32.46■■■□□ 2.79
CLPTM1-204ENST00000585961 UHRF1BP1Q6BDS2 1440 aa32.43■■■□□ 2.78
CLPTM1-204ENST00000585961 DMRT2Q9Y5R5 561 aa32.43■■■□□ 2.78
CLPTM1-204ENST00000585961 CDC42BPAQ5VT25 1732 aa32.42■■■□□ 2.78
CLPTM1-204ENST00000585961 ITSN2Q9NZM3 1697 aa32.4■■■□□ 2.78
CLPTM1-204ENST00000585961 CCNB3Q8WWL7 1395 aa32.4■■■□□ 2.78
CLPTM1-204ENST00000585961 PREX1Q8TCU6 1659 aa32.38■■■□□ 2.77
CLPTM1-204ENST00000585961 REREQ9P2R6 1566 aa32.38■■■□□ 2.77
CLPTM1-204ENST00000585961 AGLP35573 1532 aa32.38■■■□□ 2.77
CLPTM1-204ENST00000585961 MTUS2Q5JR59 1369 aa32.38■■■□□ 2.77
CLPTM1-204ENST00000585961 KIDINS220Q9ULH0 1771 aa32.37■■■□□ 2.77
CLPTM1-204ENST00000585961 ZNF644Q9H582 1327 aaPredicted RBP32.37■■■□□ 2.77
CLPTM1-204ENST00000585961 SETD1BQ9UPS6 1966 aaKnown RBP32.35■■■□□ 2.77
CLPTM1-204ENST00000585961 SAMD9LQ8IVG5 1584 aa32.35■■■□□ 2.77
CLPTM1-204ENST00000585961 SYCP2Q9BX26 1530 aa32.34■■■□□ 2.77
CLPTM1-204ENST00000585961 GGT6Q6P531 493 aa32.33■■■□□ 2.77
CLPTM1-204ENST00000585961 ZMYM3Q14202 1370 aa32.31■■■□□ 2.76
CLPTM1-204ENST00000585961 C3P01024 1663 aa32.31■■■□□ 2.76
CLPTM1-204ENST00000585961 STRCQ7RTU9 1775 aa32.28■■■□□ 2.76
CLPTM1-204ENST00000585961 KIAA1107Q9UPP5 1409 aa32.27■■■□□ 2.76
CLPTM1-204ENST00000585961 CNTLNQ9NXG0 1405 aa32.26■■■□□ 2.76
CLPTM1-204ENST00000585961 PLEKHH2Q8IVE3 1493 aa32.23■■■□□ 2.75
CLPTM1-204ENST00000585961 SUPT6HQ7KZ85 1726 aaKnown RBP32.21■■■□□ 2.75
CLPTM1-204ENST00000585961 A2MP01023 1474 aa32.2■■■□□ 2.75
CLPTM1-204ENST00000585961 NCKAP5LQ9HCH0 1330 aa32.2■■■□□ 2.74
CLPTM1-204ENST00000585961 ATP7AQ04656 1500 aa32.19■■■□□ 2.74
CLPTM1-204ENST00000585961 PTPRTO14522 1441 aa32.17■■■□□ 2.74
CLPTM1-204ENST00000585961 LOC105371045A0A1W2PR82 267 aa32.16■■■□□ 2.74
CLPTM1-204ENST00000585961 CEP162Q5TB80 1403 aa32.16■■■□□ 2.74
CLPTM1-204ENST00000585961 NPATQ14207 1427 aa32.11■■■□□ 2.73
CLPTM1-204ENST00000585961 NCOA1Q15788 1441 aa32.1■■■□□ 2.73
CLPTM1-204ENST00000585961 MBD5Q9P267 1494 aa32.1■■■□□ 2.73
CLPTM1-204ENST00000585961 TIAM1Q13009 1591 aa32.08■■■□□ 2.73
CLPTM1-204ENST00000585961 KIF3BO15066 747 aa32.07■■■□□ 2.72
CLPTM1-204ENST00000585961 PPP6R1Q9UPN7 881 aa32.07■■■□□ 2.72
CLPTM1-204ENST00000585961 INO80Q9ULG1 1556 aaPredicted RBP32.07■■■□□ 2.72
CLPTM1-204ENST00000585961 CLTCQ00610 1675 aaKnown RBP32.05■■■□□ 2.72
CLPTM1-204ENST00000585961 CAMSAP1Q5T5Y3 1602 aa32.05■■■□□ 2.72
CLPTM1-204ENST00000585961 EHBP1L1Q8N3D4 1523 aa32.05■■■□□ 2.72
CLPTM1-204ENST00000585961 PTPRKQ15262 1439 aa32.04■■■□□ 2.72
CLPTM1-204ENST00000585961 DHX29Q7Z478 1369 aaKnown RBP32.04■■■□□ 2.72
CLPTM1-204ENST00000585961 PLXNC1O60486 1568 aa32.02■■■□□ 2.72
CLPTM1-204ENST00000585961 FBXO31Q5XUX0 539 aaPredicted RBP32.02■■■□□ 2.72
CLPTM1-204ENST00000585961 MROH2AA6NES4 1674 aa32.01■■■□□ 2.71
CLPTM1-204ENST00000585961 RTEL1-TNFRSF6BF6WH68 1400 aa31.99■■■□□ 2.71
CLPTM1-204ENST00000585961 ZNF335Q9H4Z2 1342 aaPredicted RBP31.99■■■□□ 2.71
CLPTM1-204ENST00000585961 NCOA2Q15596 1464 aa31.98■■■□□ 2.71
CLPTM1-204ENST00000585961 PKD2Q13563 968 aa31.97■■■□□ 2.71
CLPTM1-204ENST00000585961 RSPH4AQ5TD94 716 aa31.97■■■□□ 2.71
CLPTM1-204ENST00000585961 TSPY4P0CV99 314 aa31.96■■■□□ 2.71
CLPTM1-204ENST00000585961 TSPY10P0CW01 314 aa31.96■■■□□ 2.71
CLPTM1-204ENST00000585961 LTBP4Q8N2S1 1624 aa31.96■■■□□ 2.71
CLPTM1-204ENST00000585961 WASHC2CQ9Y4E1 1318 aa31.94■■■□□ 2.7
CLPTM1-204ENST00000585961 ADGBQ8N7X0 1667 aa31.92■■■□□ 2.7
CLPTM1-204ENST00000585961 DISP3Q9P2K9 1392 aa31.92■■■□□ 2.7
CLPTM1-204ENST00000585961 CAMSAP2Q08AD1 1489 aa31.91■■■□□ 2.7
CLPTM1-204ENST00000585961 KANK4Q5T7N3 995 aaPredicted RBP31.9■■■□□ 2.7
CLPTM1-204ENST00000585961 CCDC141Q6ZP82 1450 aa31.89■■■□□ 2.7
CLPTM1-204ENST00000585961 UBAP1LF5GYI3 381 aa31.86■■■□□ 2.69
CLPTM1-204ENST00000585961 ILDR2Q71H61 639 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms