RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 CDC42BPAQ5VT25 1732 aa21.8■■□□□ 1.08
PRKCSH-202ENST00000585540 SUPT6HQ7KZ85 1726 aaKnown RBP21.8■■□□□ 1.08
PRKCSH-202ENST00000585540 ITSN2Q9NZM3 1697 aa21.8■■□□□ 1.08
PRKCSH-202ENST00000585540 RICTORQ6R327 1708 aa21.8■■□□□ 1.08
PRKCSH-202ENST00000585540 CDC42BPBQ9Y5S2 1711 aa21.8■■□□□ 1.08
PRKCSH-202ENST00000585540 ZMYM4Q5VZL5 1548 aa21.79■■□□□ 1.08
PRKCSH-202ENST00000585540 FRMPD1Q5SYB0 1578 aa21.78■■□□□ 1.08
PRKCSH-202ENST00000585540 MAGI2Q86UL8 1455 aa21.77■■□□□ 1.08
PRKCSH-202ENST00000585540 LRRC9Q6ZRR7 1453 aa21.77■■□□□ 1.07
PRKCSH-202ENST00000585540 POGZQ7Z3K3 1410 aa21.76■■□□□ 1.07
PRKCSH-202ENST00000585540 PLEKHH2Q8IVE3 1493 aa21.76■■□□□ 1.07
PRKCSH-202ENST00000585540 GPATCH8Q9UKJ3 1502 aaKnown RBP21.75■■□□□ 1.07
PRKCSH-202ENST00000585540 CCNB3Q8WWL7 1395 aa21.75■■□□□ 1.07
PRKCSH-202ENST00000585540 APLP2Q06481 763 aa21.75■■□□□ 1.07
PRKCSH-202ENST00000585540 SCAPERQ9BY12 1400 aa21.74■■□□□ 1.07
PRKCSH-202ENST00000585540 ZNF518AQ6AHZ1 1483 aa21.74■■□□□ 1.07
PRKCSH-202ENST00000585540 ABCC1P33527 1531 aa21.74■■□□□ 1.07
PRKCSH-202ENST00000585540 NCOA2Q15596 1464 aa21.71■■□□□ 1.07
PRKCSH-202ENST00000585540 ARHGEF40Q8TER5 1519 aa21.71■■□□□ 1.07
PRKCSH-202ENST00000585540 AEBP2Q6ZN18 517 aaPredicted RBP21.71■■□□□ 1.07
PRKCSH-202ENST00000585540 KDM5CP41229 1560 aa21.7■■□□□ 1.06
PRKCSH-202ENST00000585540 KIAA1107Q9UPP5 1409 aa21.7■■□□□ 1.06
PRKCSH-202ENST00000585540 RAPGEF3O95398 923 aa21.69■■□□□ 1.06
PRKCSH-202ENST00000585540 CFDP1Q9UEE9 299 aaPredicted RBP21.67■■□□□ 1.06
PRKCSH-202ENST00000585540 SAMD9LQ8IVG5 1584 aa21.66■■□□□ 1.06
PRKCSH-202ENST00000585540 ZFYVE16Q7Z3T8 1539 aa21.66■■□□□ 1.06
PRKCSH-202ENST00000585540 HECW2Q9P2P5 1572 aa21.63■■□□□ 1.05
PRKCSH-202ENST00000585540 MLH3Q9UHC1 1453 aa21.63■■□□□ 1.05
PRKCSH-202ENST00000585540 MIA2Q96PC5 1412 aa21.61■■□□□ 1.05
PRKCSH-202ENST00000585540 SYCP2Q9BX26 1530 aa21.6■■□□□ 1.05
PRKCSH-202ENST00000585540 ARHGEF12Q9NZN5 1544 aa21.59■■□□□ 1.05
PRKCSH-202ENST00000585540 REREQ9P2R6 1566 aa21.58■■□□□ 1.05
PRKCSH-202ENST00000585540 RSPH4AQ5TD94 716 aa21.58■■□□□ 1.05
PRKCSH-202ENST00000585540 MYOM3Q5VTT5 1437 aa21.56■■□□□ 1.04
PRKCSH-202ENST00000585540 C9orf84Q5VXU9 1444 aa21.56■■□□□ 1.04
PRKCSH-202ENST00000585540 TRAPPC8Q9Y2L5 1435 aa21.56■■□□□ 1.04
PRKCSH-202ENST00000585540 KANK4Q5T7N3 995 aaPredicted RBP21.55■■□□□ 1.04
PRKCSH-202ENST00000585540 ZNF777Q9ULD5 760 aaPredicted RBP21.55■■□□□ 1.04
PRKCSH-202ENST00000585540 ATP10AO60312 1499 aa21.55■■□□□ 1.04
PRKCSH-202ENST00000585540 CAMSAP2Q08AD1 1489 aa21.54■■□□□ 1.04
PRKCSH-202ENST00000585540 YEATS2Q9ULM3 1422 aa21.54■■□□□ 1.04
PRKCSH-202ENST00000585540 ARHGEF5Q12774 1597 aa21.53■■□□□ 1.04
PRKCSH-202ENST00000585540 MBD5Q9P267 1494 aa21.52■■□□□ 1.03
PRKCSH-202ENST00000585540 AFAP1Q8N556 730 aa21.51■■□□□ 1.03
PRKCSH-202ENST00000585540 DIP2CQ9Y2E4 1556 aa21.51■■□□□ 1.03
PRKCSH-202ENST00000585540 CCDC141Q6ZP82 1450 aa21.51■■□□□ 1.03
PRKCSH-202ENST00000585540 INO80Q9ULG1 1556 aaPredicted RBP21.5■■□□□ 1.03
PRKCSH-202ENST00000585540 RTEL1-TNFRSF6BF6WH68 1400 aa21.5■■□□□ 1.03
PRKCSH-202ENST00000585540 KIDINS220Q9ULH0 1771 aa21.5■■□□□ 1.03
PRKCSH-202ENST00000585540 ATP7AQ04656 1500 aa21.49■■□□□ 1.03
PRKCSH-202ENST00000585540 BCORL1Q5H9F3 1711 aa21.49■■□□□ 1.03
PRKCSH-202ENST00000585540 SPAG9O60271 1321 aaKnown RBP21.48■■□□□ 1.03
PRKCSH-202ENST00000585540 ABCA6Q8N139 1617 aa21.47■■□□□ 1.03
PRKCSH-202ENST00000585540 AGLP35573 1532 aa21.47■■□□□ 1.03
PRKCSH-202ENST00000585540 KDM4FA0A1W2PPD8 638 aa21.47■■□□□ 1.03
PRKCSH-202ENST00000585540 HNRNPMP52272 730 aaKnown RBP eCLIP21.46■■□□□ 1.03
PRKCSH-202ENST00000585540 MYT1LQ9UL68 1186 aa21.46■■□□□ 1.03
PRKCSH-202ENST00000585540 ADAMTSL3P82987 1691 aa21.46■■□□□ 1.03
PRKCSH-202ENST00000585540 ARID4BQ4LE39 1312 aaPredicted RBP21.43■■□□□ 1.02
PRKCSH-202ENST00000585540 FGD6Q6ZV73 1430 aa21.43■■□□□ 1.02
PRKCSH-202ENST00000585540 TCOF1Q13428 1488 aaKnown RBP21.43■■□□□ 1.02
PRKCSH-202ENST00000585540 ADGBQ8N7X0 1667 aa21.43■■□□□ 1.02
PRKCSH-202ENST00000585540 PTPN23Q9H3S7 1636 aa21.42■■□□□ 1.02
PRKCSH-202ENST00000585540 MAST1Q9Y2H9 1570 aa21.42■■□□□ 1.02
PRKCSH-202ENST00000585540 ZNF644Q9H582 1327 aaPredicted RBP21.41■■□□□ 1.02
PRKCSH-202ENST00000585540 TSPY4P0CV99 314 aa21.39■■□□□ 1.01
PRKCSH-202ENST00000585540 TSPY10P0CW01 314 aa21.39■■□□□ 1.01
PRKCSH-202ENST00000585540 PLXNC1O60486 1568 aa21.39■■□□□ 1.01
PRKCSH-202ENST00000585540 SHANK2Q9UPX8 1470 aa21.39■■□□□ 1.01
PRKCSH-202ENST00000585540 SIGLEC1Q9BZZ2 1709 aa21.37■■□□□ 1.01
PRKCSH-202ENST00000585540 A2MP01023 1474 aa21.37■■□□□ 1.01
PRKCSH-202ENST00000585540 MADDQ8WXG6 1647 aa21.35■■□□□ 1.01
PRKCSH-202ENST00000585540 DNMT1P26358 1616 aaKnown RBP21.34■■□□□ 1.01
PRKCSH-202ENST00000585540 CROCC2H7BZ55 1655 aa21.34■■□□□ 1.01
PRKCSH-202ENST00000585540 FER1L4A9Z1Z3 1794 aa21.33■■□□□ 1
PRKCSH-202ENST00000585540 FAM135AQ9P2D6 1515 aa21.31■■□□□ 1
PRKCSH-202ENST00000585540 PTPRMP28827 1452 aa21.31■■□□□ 1
PRKCSH-202ENST00000585540 CNTLNQ9NXG0 1405 aa21.3■■□□□ 1
PRKCSH-202ENST00000585540 DHX29Q7Z478 1369 aaKnown RBP21.3■■□□□ 1
PRKCSH-202ENST00000585540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.29■■□□□ 1
PRKCSH-202ENST00000585540 PPP6R1Q9UPN7 881 aa21.29■■□□□ 1
PRKCSH-202ENST00000585540 DAPK1P53355 1430 aa21.29■■□□□ 1
PRKCSH-202ENST00000585540 RIMS1Q86UR5 1692 aaKnown RBP21.28■■□□□ 1
PRKCSH-202ENST00000585540 ABCC5O15440 1437 aa21.27■■□□□ 1
PRKCSH-202ENST00000585540 EIF2AK4Q9P2K8 1649 aaKnown RBP21.26■□□□□ 0.99
PRKCSH-202ENST00000585540 MROH2AA6NES4 1674 aa21.24■□□□□ 0.99
PRKCSH-202ENST00000585540 DUOX2Q9NRD8 1548 aa21.24■□□□□ 0.99
PRKCSH-202ENST00000585540 ADGRL2O95490 1459 aa21.22■□□□□ 0.99
PRKCSH-202ENST00000585540 ESF1Q9H501 851 aaKnown RBP21.22■□□□□ 0.99
PRKCSH-202ENST00000585540 MLECQ14165 292 aa21.21■□□□□ 0.99
PRKCSH-202ENST00000585540 ANKRD30AQ9BXX3 1397 aa21.21■□□□□ 0.99
PRKCSH-202ENST00000585540 ERBINQ96RT1 1412 aa21.21■□□□□ 0.99
PRKCSH-202ENST00000585540 RRBP1Q9P2E9 1410 aaKnown RBP21.18■□□□□ 0.98
PRKCSH-202ENST00000585540 RNF17Q9BXT8 1623 aaKnown RBP21.18■□□□□ 0.98
PRKCSH-202ENST00000585540 FAM50AQ14320 339 aaKnown RBP21.17■□□□□ 0.98
PRKCSH-202ENST00000585540 PPARGC1BQ86YN6 1023 aaKnown RBP21.17■□□□□ 0.98
PRKCSH-202ENST00000585540 KIF15Q9NS87 1388 aa21.17■□□□□ 0.98
PRKCSH-202ENST00000585540 ZC3H13Q5T200 1668 aaKnown RBP21.15■□□□□ 0.98
PRKCSH-202ENST00000585540 KDM5DQ9BY66 1539 aa21.14■□□□□ 0.98
PRKCSH-202ENST00000585540 NCOA1Q15788 1441 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms