RNA–Protein interactions for RNA: ENST00000585410.1

NCAN-202, Transcript of neurocan, humanhuman

TSL 5

Gene NCAN, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAN-202ENST00000585410 LRRIQ1Q96JM4 1722 aa17.46■□□□□ 0.39
NCAN-202ENST00000585410 ARHGEF40Q8TER5 1519 aa17.46■□□□□ 0.39
NCAN-202ENST00000585410 CEP162Q5TB80 1403 aa17.46■□□□□ 0.39
NCAN-202ENST00000585410 AFAP1Q8N556 730 aa17.45■□□□□ 0.38
NCAN-202ENST00000585410 ARHGAP5Q13017 1502 aa17.45■□□□□ 0.38
NCAN-202ENST00000585410 ZFYVE16Q7Z3T8 1539 aa17.43■□□□□ 0.38
NCAN-202ENST00000585410 LOC105371045A0A1W2PR82 267 aa17.43■□□□□ 0.38
NCAN-202ENST00000585410 MYO5CQ9NQX4 1742 aa17.42■□□□□ 0.38
NCAN-202ENST00000585410 ZNF518AQ6AHZ1 1483 aa17.42■□□□□ 0.38
NCAN-202ENST00000585410 ADAMTSL3P82987 1691 aa17.42■□□□□ 0.38
NCAN-202ENST00000585410 ATP10AO60312 1499 aa17.41■□□□□ 0.38
NCAN-202ENST00000585410 PTPRMP28827 1452 aa17.41■□□□□ 0.38
NCAN-202ENST00000585410 MTUS2Q5JR59 1369 aa17.39■□□□□ 0.37
NCAN-202ENST00000585410 GPATCH8Q9UKJ3 1502 aaKnown RBP17.38■□□□□ 0.37
NCAN-202ENST00000585410 ARHGEF12Q9NZN5 1544 aa17.37■□□□□ 0.37
NCAN-202ENST00000585410 BCORL1Q5H9F3 1711 aa17.37■□□□□ 0.37
NCAN-202ENST00000585410 TRAPPC8Q9Y2L5 1435 aa17.37■□□□□ 0.37
NCAN-202ENST00000585410 CFDP1Q9UEE9 299 aaPredicted RBP17.36■□□□□ 0.37
NCAN-202ENST00000585410 C9orf84Q5VXU9 1444 aa17.36■□□□□ 0.37
NCAN-202ENST00000585410 MLH3Q9UHC1 1453 aa17.36■□□□□ 0.37
NCAN-202ENST00000585410 KDM5CP41229 1560 aa17.36■□□□□ 0.37
NCAN-202ENST00000585410 ZNF777Q9ULD5 760 aaPredicted RBP17.35■□□□□ 0.37
NCAN-202ENST00000585410 PREX2Q70Z35 1606 aa17.35■□□□□ 0.37
NCAN-202ENST00000585410 CCNB3Q8WWL7 1395 aa17.34■□□□□ 0.37
NCAN-202ENST00000585410 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
NCAN-202ENST00000585410 CDC42BPBQ9Y5S2 1711 aa17.34■□□□□ 0.37
NCAN-202ENST00000585410 ABCC1P33527 1531 aa17.33■□□□□ 0.37
NCAN-202ENST00000585410 MLECQ14165 292 aa17.33■□□□□ 0.36
NCAN-202ENST00000585410 HECW2Q9P2P5 1572 aa17.32■□□□□ 0.36
NCAN-202ENST00000585410 KIAA1107Q9UPP5 1409 aa17.32■□□□□ 0.36
NCAN-202ENST00000585410 HNRNPMP52272 730 aaKnown RBP eCLIP17.32■□□□□ 0.36
NCAN-202ENST00000585410 MADDQ8WXG6 1647 aa17.31■□□□□ 0.36
NCAN-202ENST00000585410 SIGLEC1Q9BZZ2 1709 aa17.29■□□□□ 0.36
NCAN-202ENST00000585410 CDC42BPAQ5VT25 1732 aa17.28■□□□□ 0.36
NCAN-202ENST00000585410 PLEKHH2Q8IVE3 1493 aa17.28■□□□□ 0.36
NCAN-202ENST00000585410 VPS8Q8N3P4 1428 aa17.28■□□□□ 0.36
NCAN-202ENST00000585410 SPAG9O60271 1321 aaKnown RBP17.27■□□□□ 0.36
NCAN-202ENST00000585410 EHBP1L1Q8N3D4 1523 aa17.26■□□□□ 0.35
NCAN-202ENST00000585410 SAMD9LQ8IVG5 1584 aa17.26■□□□□ 0.35
NCAN-202ENST00000585410 REREQ9P2R6 1566 aa17.26■□□□□ 0.35
NCAN-202ENST00000585410 ZNF644Q9H582 1327 aaPredicted RBP17.25■□□□□ 0.35
NCAN-202ENST00000585410 DIP2CQ9Y2E4 1556 aa17.25■□□□□ 0.35
NCAN-202ENST00000585410 AGLP35573 1532 aa17.24■□□□□ 0.35
NCAN-202ENST00000585410 SYCP2Q9BX26 1530 aa17.23■□□□□ 0.35
NCAN-202ENST00000585410 ITSN2Q9NZM3 1697 aa17.23■□□□□ 0.35
NCAN-202ENST00000585410 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
NCAN-202ENST00000585410 RIMS1Q86UR5 1692 aaKnown RBP17.22■□□□□ 0.35
NCAN-202ENST00000585410 NCOA2Q15596 1464 aa17.21■□□□□ 0.35
NCAN-202ENST00000585410 LMTK3Q96Q04 1460 aa17.21■□□□□ 0.35
NCAN-202ENST00000585410 MBD5Q9P267 1494 aa17.21■□□□□ 0.35
NCAN-202ENST00000585410 ABCA6Q8N139 1617 aa17.21■□□□□ 0.35
NCAN-202ENST00000585410 TIAM1Q13009 1591 aa17.2■□□□□ 0.34
NCAN-202ENST00000585410 CEBPAP49715 358 aaPredicted RBP17.2■□□□□ 0.34
NCAN-202ENST00000585410 RSPH4AQ5TD94 716 aa17.19■□□□□ 0.34
NCAN-202ENST00000585410 KIDINS220Q9ULH0 1771 aa17.19■□□□□ 0.34
NCAN-202ENST00000585410 MAP3K1Q13233 1512 aa17.18■□□□□ 0.34
NCAN-202ENST00000585410 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
NCAN-202ENST00000585410 LRRC9Q6ZRR7 1453 aa17.18■□□□□ 0.34
NCAN-202ENST00000585410 ESF1Q9H501 851 aaKnown RBP17.17■□□□□ 0.34
NCAN-202ENST00000585410 RTEL1-TNFRSF6BF6WH68 1400 aa17.16■□□□□ 0.34
NCAN-202ENST00000585410 HSPA2P54652 639 aa17.15■□□□□ 0.34
NCAN-202ENST00000585410 ATP7AQ04656 1500 aa17.15■□□□□ 0.34
NCAN-202ENST00000585410 CNTLNQ9NXG0 1405 aa17.13■□□□□ 0.33
NCAN-202ENST00000585410 A2MP01023 1474 aa17.13■□□□□ 0.33
NCAN-202ENST00000585410 FER1L4A9Z1Z3 1794 aa17.13■□□□□ 0.33
NCAN-202ENST00000585410 PPP6R1Q9UPN7 881 aa17.13■□□□□ 0.33
NCAN-202ENST00000585410 SUPT6HQ7KZ85 1726 aaKnown RBP17.12■□□□□ 0.33
NCAN-202ENST00000585410 INO80Q9ULG1 1556 aaPredicted RBP17.11■□□□□ 0.33
NCAN-202ENST00000585410 DHX29Q7Z478 1369 aaKnown RBP17.1■□□□□ 0.33
NCAN-202ENST00000585410 TSPY4P0CV99 314 aa17.09■□□□□ 0.33
NCAN-202ENST00000585410 TSPY10P0CW01 314 aa17.09■□□□□ 0.33
NCAN-202ENST00000585410 APLP2Q06481 763 aa17.09■□□□□ 0.33
NCAN-202ENST00000585410 CAMSAP2Q08AD1 1489 aa17.09■□□□□ 0.33
NCAN-202ENST00000585410 CCDC141Q6ZP82 1450 aa17.09■□□□□ 0.33
NCAN-202ENST00000585410 PLXNC1O60486 1568 aa17.08■□□□□ 0.32
NCAN-202ENST00000585410 ZMYM3Q14202 1370 aa17.08■□□□□ 0.32
NCAN-202ENST00000585410 GGT6Q6P531 493 aa17.08■□□□□ 0.32
NCAN-202ENST00000585410 ILDR1Q86SU0 546 aaPredicted RBP17.08■□□□□ 0.32
NCAN-202ENST00000585410 MIA2Q96PC5 1412 aa17.07■□□□□ 0.32
NCAN-202ENST00000585410 MYOM3Q5VTT5 1437 aa17.05■□□□□ 0.32
NCAN-202ENST00000585410 UHRF1BP1Q6BDS2 1440 aa17.05■□□□□ 0.32
NCAN-202ENST00000585410 NPATQ14207 1427 aa17.04■□□□□ 0.32
NCAN-202ENST00000585410 KIF3BO15066 747 aa17.03■□□□□ 0.32
NCAN-202ENST00000585410 ARHGEF5Q12774 1597 aa17.02■□□□□ 0.32
NCAN-202ENST00000585410 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
NCAN-202ENST00000585410 SETD1BQ9UPS6 1966 aaKnown RBP17■□□□□ 0.31
NCAN-202ENST00000585410 C3P01024 1663 aa17■□□□□ 0.31
NCAN-202ENST00000585410 ADGBQ8N7X0 1667 aa17■□□□□ 0.31
NCAN-202ENST00000585410 PREX1Q8TCU6 1659 aa16.99■□□□□ 0.31
NCAN-202ENST00000585410 PTPRKQ15262 1439 aa16.97■□□□□ 0.31
NCAN-202ENST00000585410 FBXO41Q8TF61 875 aa16.96■□□□□ 0.31
NCAN-202ENST00000585410 MROH2AA6NES4 1674 aa16.96■□□□□ 0.31
NCAN-202ENST00000585410 WASHC2CQ9Y4E1 1318 aa16.95■□□□□ 0.3
NCAN-202ENST00000585410 MAST1Q9Y2H9 1570 aa16.94■□□□□ 0.3
NCAN-202ENST00000585410 ABCC5O15440 1437 aa16.93■□□□□ 0.3
NCAN-202ENST00000585410 FGD6Q6ZV73 1430 aa16.92■□□□□ 0.3
NCAN-202ENST00000585410 FAM135AQ9P2D6 1515 aa16.91■□□□□ 0.3
NCAN-202ENST00000585410 PTPRTO14522 1441 aa16.91■□□□□ 0.3
NCAN-202ENST00000585410 CLTCQ00610 1675 aaKnown RBP16.91■□□□□ 0.3
NCAN-202ENST00000585410 NCOA1Q15788 1441 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms