RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 AKNAQ7Z591 1439 aa36.85■■■■□ 3.49
LSM7-202ENST00000585395 CFAP74Q9C0B2 1584 aa36.83■■■■□ 3.49
LSM7-202ENST00000585395 FANCAO15360 1455 aa36.83■■■■□ 3.49
LSM7-202ENST00000585395 HSPA2P54652 639 aa36.83■■■■□ 3.49
LSM7-202ENST00000585395 TTC37Q6PGP7 1564 aa36.83■■■■□ 3.49
LSM7-202ENST00000585395 FYCO1Q9BQS8 1478 aa36.82■■■■□ 3.49
LSM7-202ENST00000585395 ZMYM4Q5VZL5 1548 aa36.79■■■■□ 3.48
LSM7-202ENST00000585395 KIF14Q15058 1648 aa36.78■■■■□ 3.48
LSM7-202ENST00000585395 TROQ12816 1431 aaPredicted RBP36.76■■■■□ 3.48
LSM7-202ENST00000585395 CERKQ8TCT0 537 aa36.75■■■■□ 3.47
LSM7-202ENST00000585395 ZFYVE16Q7Z3T8 1539 aa36.74■■■■□ 3.47
LSM7-202ENST00000585395 MAGI2Q86UL8 1455 aa36.73■■■■□ 3.47
LSM7-202ENST00000585395 PLPPR3Q6T4P5 718 aa36.71■■■■□ 3.47
LSM7-202ENST00000585395 MYO5CQ9NQX4 1742 aa36.7■■■■□ 3.47
LSM7-202ENST00000585395 YEATS2Q9ULM3 1422 aa36.68■■■■□ 3.46
LSM7-202ENST00000585395 SIGLEC1Q9BZZ2 1709 aa36.67■■■■□ 3.46
LSM7-202ENST00000585395 FER1L4A9Z1Z3 1794 aa36.63■■■■□ 3.46
LSM7-202ENST00000585395 PLCH2O75038 1416 aa36.62■■■■□ 3.45
LSM7-202ENST00000585395 MLECQ14165 292 aa36.59■■■■□ 3.45
LSM7-202ENST00000585395 EFCAB2Q5VUJ9 269 aa36.56■■■■□ 3.44
LSM7-202ENST00000585395 ARHGAP5Q13017 1502 aa36.55■■■■□ 3.44
LSM7-202ENST00000585395 SCAPERQ9BY12 1400 aa36.52■■■■□ 3.44
LSM7-202ENST00000585395 ARHGEF12Q9NZN5 1544 aa36.52■■■■□ 3.44
LSM7-202ENST00000585395 PREX1Q8TCU6 1659 aa36.51■■■■□ 3.43
LSM7-202ENST00000585395 VPS8Q8N3P4 1428 aa36.51■■■■□ 3.43
LSM7-202ENST00000585395 MTUS2Q5JR59 1369 aa36.49■■■■□ 3.43
LSM7-202ENST00000585395 ATP10AO60312 1499 aa36.49■■■■□ 3.43
LSM7-202ENST00000585395 C9orf84Q5VXU9 1444 aa36.46■■■■□ 3.43
LSM7-202ENST00000585395 DMRT2Q9Y5R5 561 aa36.45■■■■□ 3.43
LSM7-202ENST00000585395 PREX2Q70Z35 1606 aa36.45■■■■□ 3.42
LSM7-202ENST00000585395 CDC42BPBQ9Y5S2 1711 aa36.42■■■■□ 3.42
LSM7-202ENST00000585395 DISP3Q9P2K9 1392 aa36.4■■■■□ 3.42
LSM7-202ENST00000585395 CDC42BPAQ5VT25 1732 aa36.39■■■■□ 3.42
LSM7-202ENST00000585395 EHBP1L1Q8N3D4 1523 aa36.37■■■■□ 3.41
LSM7-202ENST00000585395 CEBPAP49715 358 aaPredicted RBP36.35■■■■□ 3.41
LSM7-202ENST00000585395 STRCQ7RTU9 1775 aa36.35■■■■□ 3.41
LSM7-202ENST00000585395 SOCS7O14512 581 aa36.33■■■■□ 3.41
LSM7-202ENST00000585395 ILDR2Q71H61 639 aa36.33■■■■□ 3.41
LSM7-202ENST00000585395 MYT1LQ9UL68 1186 aa36.32■■■■□ 3.4
LSM7-202ENST00000585395 UHRF1BP1Q6BDS2 1440 aa36.32■■■■□ 3.4
LSM7-202ENST00000585395 CCNB3Q8WWL7 1395 aa36.31■■■■□ 3.4
LSM7-202ENST00000585395 SETD1BQ9UPS6 1966 aaKnown RBP36.31■■■■□ 3.4
LSM7-202ENST00000585395 ZNF777Q9ULD5 760 aaPredicted RBP36.3■■■■□ 3.4
LSM7-202ENST00000585395 ZNF518AQ6AHZ1 1483 aa36.3■■■■□ 3.4
LSM7-202ENST00000585395 TIAM1Q13009 1591 aa36.26■■■■□ 3.39
LSM7-202ENST00000585395 APLP2Q06481 763 aa36.25■■■■□ 3.39
LSM7-202ENST00000585395 GPATCH8Q9UKJ3 1502 aaKnown RBP36.24■■■■□ 3.39
LSM7-202ENST00000585395 ABCC1P33527 1531 aa36.24■■■■□ 3.39
LSM7-202ENST00000585395 KDM5CP41229 1560 aa36.23■■■■□ 3.39
LSM7-202ENST00000585395 CFDP1Q9UEE9 299 aaPredicted RBP36.22■■■■□ 3.39
LSM7-202ENST00000585395 ITSN2Q9NZM3 1697 aa36.22■■■■□ 3.39
LSM7-202ENST00000585395 PTPRTO14522 1441 aa36.21■■■■□ 3.39
LSM7-202ENST00000585395 SUPT6HQ7KZ85 1726 aaKnown RBP36.2■■■■□ 3.39
LSM7-202ENST00000585395 AFAP1Q8N556 730 aa36.19■■■■□ 3.38
LSM7-202ENST00000585395 MAP3K1Q13233 1512 aa36.18■■■■□ 3.38
LSM7-202ENST00000585395 REREQ9P2R6 1566 aa36.18■■■■□ 3.38
LSM7-202ENST00000585395 SAMD9LQ8IVG5 1584 aa36.16■■■■□ 3.38
LSM7-202ENST00000585395 DIP2CQ9Y2E4 1556 aa36.15■■■■□ 3.38
LSM7-202ENST00000585395 SPATA31D1Q6ZQQ2 1576 aa36.13■■■■□ 3.37
LSM7-202ENST00000585395 TRAPPC8Q9Y2L5 1435 aa36.12■■■■□ 3.37
LSM7-202ENST00000585395 PLEKHH2Q8IVE3 1493 aa36.11■■■■□ 3.37
LSM7-202ENST00000585395 C3P01024 1663 aa36.11■■■■□ 3.37
LSM7-202ENST00000585395 SYCP2Q9BX26 1530 aa36.11■■■■□ 3.37
LSM7-202ENST00000585395 NCOA2Q15596 1464 aa36.1■■■■□ 3.37
LSM7-202ENST00000585395 MLH3Q9UHC1 1453 aa36.09■■■■□ 3.37
LSM7-202ENST00000585395 LRRC9Q6ZRR7 1453 aa36.08■■■■□ 3.37
LSM7-202ENST00000585395 IQSEC2Q5JU85 1478 aa36.07■■■■□ 3.37
LSM7-202ENST00000585395 ESF1Q9H501 851 aaKnown RBP36.07■■■■□ 3.36
LSM7-202ENST00000585395 AGLP35573 1532 aa36.07■■■■□ 3.36
LSM7-202ENST00000585395 HNRNPMP52272 730 aaKnown RBP eCLIP36.05■■■■□ 3.36
LSM7-202ENST00000585395 ABCA6Q8N139 1617 aa36.05■■■■□ 3.36
LSM7-202ENST00000585395 LTBP4Q8N2S1 1624 aa36.05■■■■□ 3.36
LSM7-202ENST00000585395 KIAA1107Q9UPP5 1409 aa36■■■■□ 3.35
LSM7-202ENST00000585395 SPAG9O60271 1321 aaKnown RBP35.98■■■■□ 3.35
LSM7-202ENST00000585395 NCOA1Q15788 1441 aa35.98■■■■□ 3.35
LSM7-202ENST00000585395 CNTLNQ9NXG0 1405 aa35.98■■■■□ 3.35
LSM7-202ENST00000585395 KANK4Q5T7N3 995 aaPredicted RBP35.95■■■■□ 3.35
LSM7-202ENST00000585395 KIDINS220Q9ULH0 1771 aa35.94■■■■□ 3.34
LSM7-202ENST00000585395 ZNF644Q9H582 1327 aaPredicted RBP35.94■■■■□ 3.34
LSM7-202ENST00000585395 CAMSAP2Q08AD1 1489 aa35.89■■■■□ 3.34
LSM7-202ENST00000585395 ATP7AQ04656 1500 aa35.88■■■■□ 3.33
LSM7-202ENST00000585395 NPATQ14207 1427 aa35.87■■■■□ 3.33
LSM7-202ENST00000585395 CAMSAP1Q5T5Y3 1602 aa35.83■■■■□ 3.33
LSM7-202ENST00000585395 INO80Q9ULG1 1556 aaPredicted RBP35.83■■■■□ 3.33
LSM7-202ENST00000585395 MROH2AA6NES4 1674 aa35.83■■■■□ 3.33
LSM7-202ENST00000585395 MBD5Q9P267 1494 aa35.8■■■■□ 3.32
LSM7-202ENST00000585395 CCDC141Q6ZP82 1450 aa35.79■■■■□ 3.32
LSM7-202ENST00000585395 MYOM3Q5VTT5 1437 aa35.78■■■■□ 3.32
LSM7-202ENST00000585395 ZMYM3Q14202 1370 aa35.76■■■■□ 3.31
LSM7-202ENST00000585395 RSPH4AQ5TD94 716 aa35.75■■■■□ 3.31
LSM7-202ENST00000585395 ADGBQ8N7X0 1667 aa35.72■■■■□ 3.31
LSM7-202ENST00000585395 MIA2Q96PC5 1412 aa35.72■■■■□ 3.31
LSM7-202ENST00000585395 A2MP01023 1474 aa35.71■■■■□ 3.31
LSM7-202ENST00000585395 UBAP1LF5GYI3 381 aa35.7■■■■□ 3.31
LSM7-202ENST00000585395 ARHGEF5Q12774 1597 aa35.7■■■■□ 3.31
LSM7-202ENST00000585395 ZNF335Q9H4Z2 1342 aaPredicted RBP35.7■■■■□ 3.31
LSM7-202ENST00000585395 NCKAP5LQ9HCH0 1330 aa35.7■■■■□ 3.31
LSM7-202ENST00000585395 PLA2R1Q13018 1463 aa35.69■■■■□ 3.3
LSM7-202ENST00000585395 RTEL1-TNFRSF6BF6WH68 1400 aa35.69■■■■□ 3.3
LSM7-202ENST00000585395 TSPY4P0CV99 314 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms