RNA–Protein interactions for RNA: ENST00000585339.5

RANBP3-204, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-204ENST00000585339 PLPPR3Q6T4P5 718 aa12.98□□□□□ -0.33
RANBP3-204ENST00000585339 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
RANBP3-204ENST00000585339 ILDR2Q71H61 639 aa12.97□□□□□ -0.33
RANBP3-204ENST00000585339 ABCA6Q8N139 1617 aa12.97□□□□□ -0.33
RANBP3-204ENST00000585339 KDM5CP41229 1560 aa12.97□□□□□ -0.33
RANBP3-204ENST00000585339 DIP2CQ9Y2E4 1556 aa12.97□□□□□ -0.33
RANBP3-204ENST00000585339 CDC42BPBQ9Y5S2 1711 aa12.96□□□□□ -0.33
RANBP3-204ENST00000585339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.95□□□□□ -0.34
RANBP3-204ENST00000585339 HNRNPUL2Q1KMD3 747 aaKnown RBP12.95□□□□□ -0.34
RANBP3-204ENST00000585339 C9orf84Q5VXU9 1444 aa12.94□□□□□ -0.34
RANBP3-204ENST00000585339 ATP10AO60312 1499 aa12.93□□□□□ -0.34
RANBP3-204ENST00000585339 MLECQ14165 292 aa12.93□□□□□ -0.34
RANBP3-204ENST00000585339 SCAPERQ9BY12 1400 aa12.93□□□□□ -0.34
RANBP3-204ENST00000585339 REREQ9P2R6 1566 aa12.93□□□□□ -0.34
RANBP3-204ENST00000585339 ITSN2Q9NZM3 1697 aa12.93□□□□□ -0.34
RANBP3-204ENST00000585339 LTBP4Q8N2S1 1624 aa12.92□□□□□ -0.34
RANBP3-204ENST00000585339 PLCH2O75038 1416 aa12.92□□□□□ -0.34
RANBP3-204ENST00000585339 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
RANBP3-204ENST00000585339 DISP3Q9P2K9 1392 aa12.9□□□□□ -0.34
RANBP3-204ENST00000585339 PREX2Q70Z35 1606 aa12.89□□□□□ -0.35
RANBP3-204ENST00000585339 PLEKHD1A6NEE1 506 aa12.89□□□□□ -0.35
RANBP3-204ENST00000585339 KIDINS220Q9ULH0 1771 aa12.89□□□□□ -0.35
RANBP3-204ENST00000585339 RANGAP1P46060 587 aaPredicted RBP12.88□□□□□ -0.35
RANBP3-204ENST00000585339 CEBPAP49715 358 aaPredicted RBP12.88□□□□□ -0.35
RANBP3-204ENST00000585339 FAM9AQ8IZU1 332 aaPredicted RBP12.88□□□□□ -0.35
RANBP3-204ENST00000585339 CDC42BPAQ5VT25 1732 aa12.88□□□□□ -0.35
RANBP3-204ENST00000585339 ZNF518AQ6AHZ1 1483 aa12.87□□□□□ -0.35
RANBP3-204ENST00000585339 MROH2AA6NES4 1674 aa12.86□□□□□ -0.35
RANBP3-204ENST00000585339 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
RANBP3-204ENST00000585339 SOCS7O14512 581 aa12.86□□□□□ -0.35
RANBP3-204ENST00000585339 ABCC1P33527 1531 aa12.86□□□□□ -0.35
RANBP3-204ENST00000585339 UHRF1BP1Q6BDS2 1440 aa12.86□□□□□ -0.35
RANBP3-204ENST00000585339 ARHGAP5Q13017 1502 aa12.85□□□□□ -0.35
RANBP3-204ENST00000585339 ZNF142P52746 1687 aaPredicted RBP12.84□□□□□ -0.35
RANBP3-204ENST00000585339 PTPRTO14522 1441 aa12.84□□□□□ -0.35
RANBP3-204ENST00000585339 EEA1Q15075 1411 aa12.84□□□□□ -0.35
RANBP3-204ENST00000585339 AGLP35573 1532 aa12.83□□□□□ -0.35
RANBP3-204ENST00000585339 ARHGAP35Q9NRY4 1499 aa12.83□□□□□ -0.36
RANBP3-204ENST00000585339 MYO3AQ8NEV4 1616 aa12.81□□□□□ -0.36
RANBP3-204ENST00000585339 NCOA1Q15788 1441 aa12.81□□□□□ -0.36
RANBP3-204ENST00000585339 IQSEC2Q5JU85 1478 aa12.81□□□□□ -0.36
RANBP3-204ENST00000585339 MLH3Q9UHC1 1453 aa12.81□□□□□ -0.36
RANBP3-204ENST00000585339 CLTCQ00610 1675 aaKnown RBP12.8□□□□□ -0.36
RANBP3-204ENST00000585339 CAMSAP1Q5T5Y3 1602 aa12.8□□□□□ -0.36
RANBP3-204ENST00000585339 TROQ12816 1431 aaPredicted RBP12.79□□□□□ -0.36
RANBP3-204ENST00000585339 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
RANBP3-204ENST00000585339 AFAP1Q8N556 730 aa12.78□□□□□ -0.36
RANBP3-204ENST00000585339 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.37
RANBP3-204ENST00000585339 EFCAB2Q5VUJ9 269 aa12.76□□□□□ -0.37
RANBP3-204ENST00000585339 FMN1Q68DA7 1419 aa12.76□□□□□ -0.37
RANBP3-204ENST00000585339 PLXNC1O60486 1568 aa12.76□□□□□ -0.37
RANBP3-204ENST00000585339 POLR1AO95602 1720 aaPredicted RBP12.75□□□□□ -0.37
RANBP3-204ENST00000585339 INO80Q9ULG1 1556 aaPredicted RBP12.75□□□□□ -0.37
RANBP3-204ENST00000585339 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
RANBP3-204ENST00000585339 CEP170BQ9Y4F5 1589 aaPredicted RBP12.73□□□□□ -0.37
RANBP3-204ENST00000585339 SYCP2Q9BX26 1530 aa12.72□□□□□ -0.37
RANBP3-204ENST00000585339 CLIP1P30622 1438 aa12.71□□□□□ -0.37
RANBP3-204ENST00000585339 CNTLNQ9NXG0 1405 aa12.71□□□□□ -0.38
RANBP3-204ENST00000585339 TCOF1Q13428 1488 aaKnown RBP12.7□□□□□ -0.38
RANBP3-204ENST00000585339 NPATQ14207 1427 aa12.7□□□□□ -0.38
RANBP3-204ENST00000585339 MED1Q15648 1581 aaPredicted RBP12.69□□□□□ -0.38
RANBP3-204ENST00000585339 ATP7AQ04656 1500 aa12.69□□□□□ -0.38
RANBP3-204ENST00000585339 ADGBQ8N7X0 1667 aa12.69□□□□□ -0.38
RANBP3-204ENST00000585339 NEURL4Q96JN8 1562 aa12.69□□□□□ -0.38
RANBP3-204ENST00000585339 PLA2R1Q13018 1463 aa12.68□□□□□ -0.38
RANBP3-204ENST00000585339 ZNF335Q9H4Z2 1342 aaPredicted RBP12.67□□□□□ -0.38
RANBP3-204ENST00000585339 ATP1B4Q9UN42 357 aaPredicted RBP12.67□□□□□ -0.38
RANBP3-204ENST00000585339 DNMT1P26358 1616 aaKnown RBP12.66□□□□□ -0.38
RANBP3-204ENST00000585339 ALKQ9UM73 1620 aa12.66□□□□□ -0.38
RANBP3-204ENST00000585339 CCDC18Q5T9S5 1454 aa12.66□□□□□ -0.38
RANBP3-204ENST00000585339 PTPRKQ15262 1439 aa12.65□□□□□ -0.38
RANBP3-204ENST00000585339 NCKAP5LQ9HCH0 1330 aa12.64□□□□□ -0.39
RANBP3-204ENST00000585339 CASKIN1Q8WXD9 1431 aa12.64□□□□□ -0.39
RANBP3-204ENST00000585339 STRCP1A6NGW2 1772 aa12.64□□□□□ -0.39
RANBP3-204ENST00000585339 CDK11AQ9UQ88 783 aaPredicted RBP12.64□□□□□ -0.39
RANBP3-204ENST00000585339 EHMT2Q96KQ7 1210 aa12.63□□□□□ -0.39
RANBP3-204ENST00000585339 MYT1LQ9UL68 1186 aa12.63□□□□□ -0.39
RANBP3-204ENST00000585339 ZMYM3Q14202 1370 aa12.63□□□□□ -0.39
RANBP3-204ENST00000585339 GPATCH8Q9UKJ3 1502 aaKnown RBP12.62□□□□□ -0.39
RANBP3-204ENST00000585339 A2MP01023 1474 aa12.6□□□□□ -0.39
RANBP3-204ENST00000585339 FYCO1Q9BQS8 1478 aa12.6□□□□□ -0.39
RANBP3-204ENST00000585339 VWDEQ8N2E2 1590 aa12.6□□□□□ -0.39
RANBP3-204ENST00000585339 TIAM1Q13009 1591 aa12.59□□□□□ -0.39
RANBP3-204ENST00000585339 A2ML1A8K2U0 1454 aa12.59□□□□□ -0.39
RANBP3-204ENST00000585339 UBAP1LF5GYI3 381 aa12.58□□□□□ -0.4
RANBP3-204ENST00000585339 UBTFP17480 764 aaKnown RBP12.58□□□□□ -0.4
RANBP3-204ENST00000585339 ESF1Q9H501 851 aaKnown RBP12.58□□□□□ -0.4
RANBP3-204ENST00000585339 XIRP1Q702N8 1843 aaKnown RBP12.57□□□□□ -0.4
RANBP3-204ENST00000585339 CPS1P31327 1500 aa12.56□□□□□ -0.4
RANBP3-204ENST00000585339 SPAG9O60271 1321 aaKnown RBP12.55□□□□□ -0.4
RANBP3-204ENST00000585339 IQGAP1P46940 1657 aa12.54□□□□□ -0.4
RANBP3-204ENST00000585339 ZC3H13Q5T200 1668 aaKnown RBP12.54□□□□□ -0.4
RANBP3-204ENST00000585339 KIAA1107Q9UPP5 1409 aa12.54□□□□□ -0.4
RANBP3-204ENST00000585339 DEPDC5O75140 1603 aa12.54□□□□□ -0.4
RANBP3-204ENST00000585339 HSPA1LP34931 641 aa12.53□□□□□ -0.4
RANBP3-204ENST00000585339 HNRNPMP52272 730 aaKnown RBP eCLIP12.53□□□□□ -0.47e-7■■■□□ 15.5
RANBP3-204ENST00000585339 PKD2Q13563 968 aa12.53□□□□□ -0.4
RANBP3-204ENST00000585339 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
RANBP3-204ENST00000585339 SHANK2Q9UPX8 1470 aa12.53□□□□□ -0.4
RANBP3-204ENST00000585339 CFAP65Q6ZU64 1925 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms