RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 OS9Q13438 667 aaPredicted RBP9.27□□□□□ -0.93
CDH8-214ENST00000585315 RTN4Q9NQC3 1192 aaKnown RBP9.26□□□□□ -0.93
CDH8-214ENST00000585315 HDGFP51858 240 aaKnown RBP9.26□□□□□ -0.93
CDH8-214ENST00000585315 C14orf37Q86TY3 774 aa9.25□□□□□ -0.93
CDH8-214ENST00000585315 KIAA1211Q6ZU35 1233 aa9.25□□□□□ -0.93
CDH8-214ENST00000585315 PMFBP1Q8TBY8 1022 aa9.25□□□□□ -0.93
CDH8-214ENST00000585315 DCAF11Q8TEB1 546 aa9.24□□□□□ -0.93
CDH8-214ENST00000585315 U2SURPO15042 1029 aaKnown RBP9.24□□□□□ -0.93
CDH8-214ENST00000585315 FMN1Q68DA7 1419 aa9.23□□□□□ -0.93
CDH8-214ENST00000585315 CSPP1Q1MSJ5 1256 aa9.23□□□□□ -0.93
CDH8-214ENST00000585315 KCNH8Q96L42 1107 aa9.23□□□□□ -0.93
CDH8-214ENST00000585315 NLRP13Q86W25 1043 aa9.23□□□□□ -0.93
CDH8-214ENST00000585315 PHF14O94880 888 aa9.23□□□□□ -0.93
CDH8-214ENST00000585315 GOLGA6L3A6NEY3 463 aa9.23□□□□□ -0.93
CDH8-214ENST00000585315 DRC7Q8IY82 874 aa9.22□□□□□ -0.93
CDH8-214ENST00000585315 CC2D1BQ5T0F9 858 aaKnown RBP9.22□□□□□ -0.93
CDH8-214ENST00000585315 MORC1Q86VD1 984 aa9.22□□□□□ -0.93
CDH8-214ENST00000585315 CARMIL1Q5VZK9 1371 aa9.22□□□□□ -0.93
CDH8-214ENST00000585315 NGEFQ8N5V2 710 aa9.22□□□□□ -0.93
CDH8-214ENST00000585315 EIF3AQ14152 1382 aaKnown RBP9.21□□□□□ -0.93
CDH8-214ENST00000585315 RSPH6AQ9H0K4 717 aa9.21□□□□□ -0.93
CDH8-214ENST00000585315 HMMRO75330 724 aa9.2□□□□□ -0.94
CDH8-214ENST00000585315 HSPA5P11021 654 aaKnown RBP9.2□□□□□ -0.94
CDH8-214ENST00000585315 CHMP4CQ96CF2 233 aa9.2□□□□□ -0.94
CDH8-214ENST00000585315 KIF3AQ9Y496 699 aa9.2□□□□□ -0.94
CDH8-214ENST00000585315 DDX11L8A8MPP1 907 aa9.19□□□□□ -0.94
CDH8-214ENST00000585315 TPM4P67936 248 aa9.19□□□□□ -0.94
CDH8-214ENST00000585315 TSHZ2Q9NRE2 1034 aa9.19□□□□□ -0.94
CDH8-214ENST00000585315 GOLGA2Q08379 1002 aa9.19□□□□□ -0.94
CDH8-214ENST00000585315 RTF1Q92541 710 aaKnown RBP9.18□□□□□ -0.94
CDH8-214ENST00000585315 RAB3GAP2Q9H2M9 1393 aa9.18□□□□□ -0.94
CDH8-214ENST00000585315 RSPH4AQ5TD94 716 aa9.18□□□□□ -0.94
CDH8-214ENST00000585315 SKOR2Q2VWA4 1001 aaPredicted RBP9.18□□□□□ -0.94
CDH8-214ENST00000585315 A0A0G2JS52 829 aa9.17□□□□□ -0.94
CDH8-214ENST00000585315 ATP6V1DQ9Y5K8 247 aa9.17□□□□□ -0.94
CDH8-214ENST00000585315 HDGFL2Q7Z4V5 671 aaPredicted RBP9.16□□□□□ -0.94
CDH8-214ENST00000585315 ST18O60284 1047 aa9.16□□□□□ -0.94
CDH8-214ENST00000585315 GNL2Q13823 731 aaKnown RBP9.16□□□□□ -0.94
CDH8-214ENST00000585315 SLKQ9H2G2 1235 aaPredicted RBP9.16□□□□□ -0.94
CDH8-214ENST00000585315 ANKRD30AQ9BXX3 1397 aa9.16□□□□□ -0.94
CDH8-214ENST00000585315 FANCIQ9NVI1 1328 aa9.16□□□□□ -0.94
CDH8-214ENST00000585315 NAP1L2Q9ULW6 460 aaPredicted RBP9.16□□□□□ -0.94
CDH8-214ENST00000585315 CUX2O14529 1486 aa9.16□□□□□ -0.94
CDH8-214ENST00000585315 LMOD3Q0VAK6 560 aa9.16□□□□□ -0.94
CDH8-214ENST00000585315 TNNT3P45378 269 aaPredicted RBP9.15□□□□□ -0.94
CDH8-214ENST00000585315 GPATCH3Q96I76 525 aa9.15□□□□□ -0.94
CDH8-214ENST00000585315 GOLGA6L1Q8N7Z2 621 aa9.15□□□□□ -0.94
CDH8-214ENST00000585315 SRPK2P78362 688 aaKnown RBP9.15□□□□□ -0.94
CDH8-214ENST00000585315 PKD2Q13563 968 aa9.15□□□□□ -0.94
CDH8-214ENST00000585315 CENPQQ7L2Z9 268 aaPredicted RBP9.15□□□□□ -0.95
CDH8-214ENST00000585315 ZBTB7CA1YPR0 619 aa9.15□□□□□ -0.95
CDH8-214ENST00000585315 PLPPR3Q6T4P5 718 aa9.14□□□□□ -0.95
CDH8-214ENST00000585315 CGNL1Q0VF96 1302 aa9.14□□□□□ -0.95
CDH8-214ENST00000585315 TPRNQ4KMQ1 711 aa9.14□□□□□ -0.95
CDH8-214ENST00000585315 ZBED9Q6R2W3 1325 aa9.14□□□□□ -0.95
CDH8-214ENST00000585315 U2AF1L5P0DN76 240 aaPredicted RBP9.14□□□□□ -0.95
CDH8-214ENST00000585315 U2AF1Q01081 240 aaKnown RBP eCLIP9.14□□□□□ -0.95
CDH8-214ENST00000585315 CARMIL2Q6F5E8 1435 aa9.14□□□□□ -0.95
CDH8-214ENST00000585315 HSP90AA2PQ14568 343 aaPredicted RBP9.14□□□□□ -0.95
CDH8-214ENST00000585315 SPAG9O60271 1321 aaKnown RBP9.14□□□□□ -0.95
CDH8-214ENST00000585315 AAMPQ13685 434 aa9.14□□□□□ -0.95
CDH8-214ENST00000585315 MPHOSPH9Q99550 1183 aa9.14□□□□□ -0.95
CDH8-214ENST00000585315 STK31Q9BXU1 1019 aa9.13□□□□□ -0.95
CDH8-214ENST00000585315 CENPJQ9HC77 1338 aaPredicted RBP9.13□□□□□ -0.95
CDH8-214ENST00000585315 ITPRIPQ8IWB1 547 aa9.13□□□□□ -0.95
CDH8-214ENST00000585315 KIF15Q9NS87 1388 aa9.13□□□□□ -0.95
CDH8-214ENST00000585315 TERF2IPQ9NYB0 399 aa9.13□□□□□ -0.95
CDH8-214ENST00000585315 SOGA1O94964 1423 aa9.12□□□□□ -0.95
CDH8-214ENST00000585315 SENP3-EIF4A1A0A087X0R7 540 aa9.12□□□□□ -0.95
CDH8-214ENST00000585315 GSE1Q14687 1217 aa9.12□□□□□ -0.95
CDH8-214ENST00000585315 FAM161AQ3B820 660 aa9.12□□□□□ -0.95
CDH8-214ENST00000585315 NUP155O75694 1391 aa9.12□□□□□ -0.95
CDH8-214ENST00000585315 GZF1Q9H116 711 aaPredicted RBP9.12□□□□□ -0.95
CDH8-214ENST00000585315 SMC4Q9NTJ3 1288 aa9.11□□□□□ -0.95
CDH8-214ENST00000585315 MYBBP1AQ9BQG0 1328 aaKnown RBP9.1□□□□□ -0.95
CDH8-214ENST00000585315 NPHP1O15259 732 aa9.1□□□□□ -0.95
CDH8-214ENST00000585315 SMARCA2P51531 1590 aa9.09□□□□□ -0.95
CDH8-214ENST00000585315 CCDC18Q5T9S5 1454 aa9.09□□□□□ -0.95
CDH8-214ENST00000585315 SPRYD3Q8NCJ5 442 aa9.09□□□□□ -0.95
CDH8-214ENST00000585315 KIF16BQ96L93 1317 aa9.09□□□□□ -0.95
CDH8-214ENST00000585315 GPS2Q13227 327 aa9.08□□□□□ -0.96
CDH8-214ENST00000585315 MFAP1P55081 439 aaKnown RBP9.08□□□□□ -0.96
CDH8-214ENST00000585315 EFCAB2Q5VUJ9 269 aa9.08□□□□□ -0.96
CDH8-214ENST00000585315 TPM3P06753 285 aa9.08□□□□□ -0.96
CDH8-214ENST00000585315 NOC3LQ8WTT2 800 aaKnown RBP9.08□□□□□ -0.96
CDH8-214ENST00000585315 MTERF4Q7Z6M4 381 aaKnown RBP9.08□□□□□ -0.96
CDH8-214ENST00000585315 L3MBTL2Q969R5 705 aa9.07□□□□□ -0.96
CDH8-214ENST00000585315 E9PSI1 815 aa9.07□□□□□ -0.96
CDH8-214ENST00000585315 LMOD2Q6P5Q4 547 aa9.07□□□□□ -0.96
CDH8-214ENST00000585315 REC8O95072 547 aa9.07□□□□□ -0.96
CDH8-214ENST00000585315 PDE4AP27815 886 aa9.07□□□□□ -0.96
CDH8-214ENST00000585315 STAC3Q96MF2 364 aa9.06□□□□□ -0.96
CDH8-214ENST00000585315 PRKRIP1Q9H875 184 aaPredicted RBP9.06□□□□□ -0.96
CDH8-214ENST00000585315 DDX49Q9Y6V7 483 aaKnown RBP9.06□□□□□ -0.96
CDH8-214ENST00000585315 UACAQ9BZF9 1416 aa9.06□□□□□ -0.96
CDH8-214ENST00000585315 EIF4G1Q04637 1599 aaKnown RBP9.05□□□□□ -0.96
CDH8-214ENST00000585315 KANK4Q5T7N3 995 aaPredicted RBP9.05□□□□□ -0.96
CDH8-214ENST00000585315 LRRFIP1Q32MZ4 808 aaKnown RBP9.05□□□□□ -0.96
CDH8-214ENST00000585315 MAP7D2Q96T17 732 aa9.05□□□□□ -0.96
CDH8-214ENST00000585315 TRIM6-TRIM34B2RNG4 842 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms