RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 UBTFP17480 764 aaKnown RBP17.28■□□□□ 0.36
CASC3-210ENST00000584997 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
CASC3-210ENST00000584997 PLCH2O75038 1416 aa17.28■□□□□ 0.36
CASC3-210ENST00000584997 FMN1Q68DA7 1419 aa17.28■□□□□ 0.36
CASC3-210ENST00000584997 SCAPERQ9BY12 1400 aa17.28■□□□□ 0.36
CASC3-210ENST00000584997 FER1L4A9Z1Z3 1794 aa17.28■□□□□ 0.36
CASC3-210ENST00000584997 MLECQ14165 292 aa17.26■□□□□ 0.35
CASC3-210ENST00000584997 HSPA2P54652 639 aa17.24■□□□□ 0.35
CASC3-210ENST00000584997 CDK11AQ9UQ88 783 aaPredicted RBP17.24■□□□□ 0.35
CASC3-210ENST00000584997 KIF14Q15058 1648 aa17.23■□□□□ 0.35
CASC3-210ENST00000584997 EFCAB2Q5VUJ9 269 aa17.22■□□□□ 0.35
CASC3-210ENST00000584997 ARHGAP35Q9NRY4 1499 aa17.22■□□□□ 0.35
CASC3-210ENST00000584997 C9orf84Q5VXU9 1444 aa17.21■□□□□ 0.35
CASC3-210ENST00000584997 ATP10AO60312 1499 aa17.21■□□□□ 0.35
CASC3-210ENST00000584997 ARHGAP5Q13017 1502 aa17.19■□□□□ 0.34
CASC3-210ENST00000584997 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
CASC3-210ENST00000584997 ARHGEF12Q9NZN5 1544 aa17.18■□□□□ 0.34
CASC3-210ENST00000584997 CLIP1P30622 1438 aa17.18■□□□□ 0.34
CASC3-210ENST00000584997 TROQ12816 1431 aaPredicted RBP17.18■□□□□ 0.34
CASC3-210ENST00000584997 MYT1LQ9UL68 1186 aa17.16■□□□□ 0.34
CASC3-210ENST00000584997 PREX1Q8TCU6 1659 aa17.16■□□□□ 0.34
CASC3-210ENST00000584997 LRRIQ1Q96JM4 1722 aa17.15■□□□□ 0.34
CASC3-210ENST00000584997 KDM5CP41229 1560 aa17.14■□□□□ 0.33
CASC3-210ENST00000584997 CDC42BPBQ9Y5S2 1711 aa17.11■□□□□ 0.33
CASC3-210ENST00000584997 AFAP1Q8N556 730 aa17.11■□□□□ 0.33
CASC3-210ENST00000584997 DIP2CQ9Y2E4 1556 aa17.11■□□□□ 0.33
CASC3-210ENST00000584997 CEBPAP49715 358 aaPredicted RBP17.1■□□□□ 0.33
CASC3-210ENST00000584997 CERKQ8TCT0 537 aa17.1■□□□□ 0.33
CASC3-210ENST00000584997 PREX2Q70Z35 1606 aa17.09■□□□□ 0.33
CASC3-210ENST00000584997 SETD1BQ9UPS6 1966 aaKnown RBP17.08■□□□□ 0.33
CASC3-210ENST00000584997 ABCA6Q8N139 1617 aa17.08■□□□□ 0.32
CASC3-210ENST00000584997 REREQ9P2R6 1566 aa17.07■□□□□ 0.32
CASC3-210ENST00000584997 CCDC18Q5T9S5 1454 aa17.07■□□□□ 0.32
CASC3-210ENST00000584997 UHRF1BP1Q6BDS2 1440 aa17.07■□□□□ 0.32
CASC3-210ENST00000584997 ABCC1P33527 1531 aa17.06■□□□□ 0.32
CASC3-210ENST00000584997 ITSN2Q9NZM3 1697 aa17.06■□□□□ 0.32
CASC3-210ENST00000584997 MLH3Q9UHC1 1453 aa17.05■□□□□ 0.32
CASC3-210ENST00000584997 ESF1Q9H501 851 aaKnown RBP17.05■□□□□ 0.32
CASC3-210ENST00000584997 CASKIN1Q8WXD9 1431 aa17.04■□□□□ 0.32
CASC3-210ENST00000584997 STRCQ7RTU9 1775 aa17.03■□□□□ 0.32
CASC3-210ENST00000584997 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
CASC3-210ENST00000584997 C3P01024 1663 aa17.03■□□□□ 0.32
CASC3-210ENST00000584997 TRAPPC8Q9Y2L5 1435 aa17.03■□□□□ 0.32
CASC3-210ENST00000584997 CDC42BPAQ5VT25 1732 aa17.02■□□□□ 0.32
CASC3-210ENST00000584997 AGLP35573 1532 aa17.01■□□□□ 0.31
CASC3-210ENST00000584997 KIDINS220Q9ULH0 1771 aa17■□□□□ 0.31
CASC3-210ENST00000584997 FYCO1Q9BQS8 1478 aa16.99■□□□□ 0.31
CASC3-210ENST00000584997 ZNF777Q9ULD5 760 aaPredicted RBP16.96■□□□□ 0.31
CASC3-210ENST00000584997 CNTLNQ9NXG0 1405 aa16.96■□□□□ 0.3
CASC3-210ENST00000584997 SAMD9LQ8IVG5 1584 aa16.95■□□□□ 0.3
CASC3-210ENST00000584997 SYCP2Q9BX26 1530 aa16.95■□□□□ 0.3
CASC3-210ENST00000584997 PTPRTO14522 1441 aa16.93■□□□□ 0.3
CASC3-210ENST00000584997 SUPT6HQ7KZ85 1726 aaKnown RBP16.92■□□□□ 0.3
CASC3-210ENST00000584997 SPAG9O60271 1321 aaKnown RBP16.92■□□□□ 0.3
CASC3-210ENST00000584997 MROH2AA6NES4 1674 aa16.91■□□□□ 0.3
CASC3-210ENST00000584997 GPATCH8Q9UKJ3 1502 aaKnown RBP16.91■□□□□ 0.3
CASC3-210ENST00000584997 ATP7AQ04656 1500 aa16.9■□□□□ 0.3
CASC3-210ENST00000584997 NPATQ14207 1427 aa16.88■□□□□ 0.29
CASC3-210ENST00000584997 NCOA1Q15788 1441 aa16.88■□□□□ 0.29
CASC3-210ENST00000584997 PLEKHH2Q8IVE3 1493 aa16.88■□□□□ 0.29
CASC3-210ENST00000584997 HNRNPMP52272 730 aaKnown RBP eCLIP16.88■□□□□ 0.295e-6■■■■□ 21
CASC3-210ENST00000584997 CFDP1Q9UEE9 299 aaPredicted RBP16.87■□□□□ 0.29
CASC3-210ENST00000584997 CCNB3Q8WWL7 1395 aa16.87■□□□□ 0.29
CASC3-210ENST00000584997 INO80Q9ULG1 1556 aaPredicted RBP16.86■□□□□ 0.29
CASC3-210ENST00000584997 CAMSAP1Q5T5Y3 1602 aa16.86■□□□□ 0.29
CASC3-210ENST00000584997 CLTCQ00610 1675 aaKnown RBP16.86■□□□□ 0.29
CASC3-210ENST00000584997 ZMYM3Q14202 1370 aa16.86■□□□□ 0.29
CASC3-210ENST00000584997 DISP3Q9P2K9 1392 aa16.86■□□□□ 0.29
CASC3-210ENST00000584997 KIAA1107Q9UPP5 1409 aa16.86■□□□□ 0.29
CASC3-210ENST00000584997 MTUS2Q5JR59 1369 aa16.85■□□□□ 0.29
CASC3-210ENST00000584997 LTBP4Q8N2S1 1624 aa16.85■□□□□ 0.29
CASC3-210ENST00000584997 A2MP01023 1474 aa16.84■□□□□ 0.29
CASC3-210ENST00000584997 PLXNC1O60486 1568 aa16.84■□□□□ 0.29
CASC3-210ENST00000584997 MYO3AQ8NEV4 1616 aa16.82■□□□□ 0.28
CASC3-210ENST00000584997 IQSEC2Q5JU85 1478 aa16.82■□□□□ 0.28
CASC3-210ENST00000584997 ZNF142P52746 1687 aaPredicted RBP16.81■□□□□ 0.28
CASC3-210ENST00000584997 ADGBQ8N7X0 1667 aa16.81■□□□□ 0.28
CASC3-210ENST00000584997 GGT6Q6P531 493 aa16.81■□□□□ 0.28
CASC3-210ENST00000584997 SPATA31D1Q6ZQQ2 1576 aa16.79■□□□□ 0.28
CASC3-210ENST00000584997 TIAM1Q13009 1591 aa16.78■□□□□ 0.28
CASC3-210ENST00000584997 CEP170BQ9Y4F5 1589 aaPredicted RBP16.78■□□□□ 0.28
CASC3-210ENST00000584997 EHBP1L1Q8N3D4 1523 aa16.78■□□□□ 0.28
CASC3-210ENST00000584997 PTPRKQ15262 1439 aa16.78■□□□□ 0.28
CASC3-210ENST00000584997 NCKAP5LQ9HCH0 1330 aa16.77■□□□□ 0.28
CASC3-210ENST00000584997 PLA2R1Q13018 1463 aa16.77■□□□□ 0.28
CASC3-210ENST00000584997 PKD2Q13563 968 aa16.76■□□□□ 0.27
CASC3-210ENST00000584997 ILDR2Q71H61 639 aa16.75■□□□□ 0.27
CASC3-210ENST00000584997 PPP6R1Q9UPN7 881 aa16.75■□□□□ 0.27
CASC3-210ENST00000584997 ZNF335Q9H4Z2 1342 aaPredicted RBP16.74■□□□□ 0.27
CASC3-210ENST00000584997 ZNF644Q9H582 1327 aaPredicted RBP16.74■□□□□ 0.27
CASC3-210ENST00000584997 TCOF1Q13428 1488 aaKnown RBP16.73■□□□□ 0.27
CASC3-210ENST00000584997 MBD5Q9P267 1494 aa16.73■□□□□ 0.27
CASC3-210ENST00000584997 CEP162Q5TB80 1403 aa16.72■□□□□ 0.27
CASC3-210ENST00000584997 RTEL1-TNFRSF6BF6WH68 1400 aa16.71■□□□□ 0.27
CASC3-210ENST00000584997 A2ML1A8K2U0 1454 aa16.7■□□□□ 0.26
CASC3-210ENST00000584997 SOCS7O14512 581 aa16.7■□□□□ 0.26
CASC3-210ENST00000584997 DHX29Q7Z478 1369 aaKnown RBP16.69■□□□□ 0.26
CASC3-210ENST00000584997 UBAP1LF5GYI3 381 aa16.69■□□□□ 0.26
CASC3-210ENST00000584997 DNMT1P26358 1616 aaKnown RBP16.69■□□□□ 0.26
CASC3-210ENST00000584997 CCDC141Q6ZP82 1450 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms