RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 HSPA2P54652 639 aa21.57■■□□□ 1.04
SREBF1-223ENST00000584760 TROQ12816 1431 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-223ENST00000584760 CEP162Q5TB80 1403 aa21.56■■□□□ 1.04
SREBF1-223ENST00000584760 FANCAO15360 1455 aa21.55■■□□□ 1.04
SREBF1-223ENST00000584760 ARHGEF40Q8TER5 1519 aa21.54■■□□□ 1.04
SREBF1-223ENST00000584760 RICTORQ6R327 1708 aa21.53■■□□□ 1.04
SREBF1-223ENST00000584760 RIMS1Q86UR5 1692 aaKnown RBP21.53■■□□□ 1.04
SREBF1-223ENST00000584760 MLECQ14165 292 aa21.52■■□□□ 1.04
SREBF1-223ENST00000584760 CDK11AQ9UQ88 783 aaPredicted RBP21.52■■□□□ 1.04
SREBF1-223ENST00000584760 POGZQ7Z3K3 1410 aa21.5■■□□□ 1.03
SREBF1-223ENST00000584760 PLCH2O75038 1416 aa21.49■■□□□ 1.03
SREBF1-223ENST00000584760 YEATS2Q9ULM3 1422 aa21.49■■□□□ 1.03
SREBF1-223ENST00000584760 PREX2Q70Z35 1606 aa21.46■■□□□ 1.03
SREBF1-223ENST00000584760 CDC42BPBQ9Y5S2 1711 aa21.46■■□□□ 1.03
SREBF1-223ENST00000584760 ZFYVE16Q7Z3T8 1539 aa21.45■■□□□ 1.02
SREBF1-223ENST00000584760 CDC42BPAQ5VT25 1732 aa21.43■■□□□ 1.02
SREBF1-223ENST00000584760 SCAPERQ9BY12 1400 aa21.43■■□□□ 1.02
SREBF1-223ENST00000584760 ZMYM4Q5VZL5 1548 aa21.43■■□□□ 1.02
SREBF1-223ENST00000584760 LOC105371045A0A1W2PR82 267 aa21.42■■□□□ 1.02
SREBF1-223ENST00000584760 MAGI2Q86UL8 1455 aa21.41■■□□□ 1.02
SREBF1-223ENST00000584760 CERKQ8TCT0 537 aa21.41■■□□□ 1.02
SREBF1-223ENST00000584760 SIGLEC1Q9BZZ2 1709 aa21.41■■□□□ 1.02
SREBF1-223ENST00000584760 ARHGAP5Q13017 1502 aa21.4■■□□□ 1.02
SREBF1-223ENST00000584760 EFCAB2Q5VUJ9 269 aa21.36■■□□□ 1.01
SREBF1-223ENST00000584760 CEBPAP49715 358 aaPredicted RBP21.35■■□□□ 1.01
SREBF1-223ENST00000584760 EHBP1L1Q8N3D4 1523 aa21.34■■□□□ 1.01
SREBF1-223ENST00000584760 ATP10AO60312 1499 aa21.34■■□□□ 1.01
SREBF1-223ENST00000584760 ABCC1P33527 1531 aa21.34■■□□□ 1.01
SREBF1-223ENST00000584760 VPS8Q8N3P4 1428 aa21.32■■□□□ 1
SREBF1-223ENST00000584760 ITSN2Q9NZM3 1697 aa21.32■■□□□ 1
SREBF1-223ENST00000584760 KDM5CP41229 1560 aa21.31■■□□□ 1
SREBF1-223ENST00000584760 FER1L4A9Z1Z3 1794 aa21.31■■□□□ 1
SREBF1-223ENST00000584760 C9orf84Q5VXU9 1444 aa21.3■■□□□ 1
SREBF1-223ENST00000584760 MYT1LQ9UL68 1186 aa21.3■■□□□ 1
SREBF1-223ENST00000584760 TIAM1Q13009 1591 aa21.3■■□□□ 1
SREBF1-223ENST00000584760 MTUS2Q5JR59 1369 aa21.29■■□□□ 1
SREBF1-223ENST00000584760 ARHGEF12Q9NZN5 1544 aa21.29■■□□□ 1
SREBF1-223ENST00000584760 GPATCH8Q9UKJ3 1502 aaKnown RBP21.29■■□□□ 1
SREBF1-223ENST00000584760 SAMD9LQ8IVG5 1584 aa21.28■■□□□ 1
SREBF1-223ENST00000584760 ZNF518AQ6AHZ1 1483 aa21.28■■□□□ 1
SREBF1-223ENST00000584760 AFAP1Q8N556 730 aa21.28■■□□□ 1
SREBF1-223ENST00000584760 SUPT6HQ7KZ85 1726 aaKnown RBP21.24■□□□□ 0.99
SREBF1-223ENST00000584760 DMRT2Q9Y5R5 561 aa21.23■□□□□ 0.99
SREBF1-223ENST00000584760 SYCP2Q9BX26 1530 aa21.21■□□□□ 0.99
SREBF1-223ENST00000584760 PREX1Q8TCU6 1659 aa21.21■□□□□ 0.99
SREBF1-223ENST00000584760 ABCA6Q8N139 1617 aa21.2■□□□□ 0.98
SREBF1-223ENST00000584760 CCNB3Q8WWL7 1395 aa21.2■□□□□ 0.98
SREBF1-223ENST00000584760 TRAPPC8Q9Y2L5 1435 aa21.2■□□□□ 0.98
SREBF1-223ENST00000584760 MAP3K1Q13233 1512 aa21.19■□□□□ 0.98
SREBF1-223ENST00000584760 DIP2CQ9Y2E4 1556 aa21.19■□□□□ 0.98
SREBF1-223ENST00000584760 UHRF1BP1Q6BDS2 1440 aa21.19■□□□□ 0.98
SREBF1-223ENST00000584760 MLH3Q9UHC1 1453 aa21.18■□□□□ 0.98
SREBF1-223ENST00000584760 KIDINS220Q9ULH0 1771 aa21.18■□□□□ 0.98
SREBF1-223ENST00000584760 NCOA2Q15596 1464 aa21.17■□□□□ 0.98
SREBF1-223ENST00000584760 REREQ9P2R6 1566 aa21.16■□□□□ 0.98
SREBF1-223ENST00000584760 LRRC9Q6ZRR7 1453 aa21.16■□□□□ 0.98
SREBF1-223ENST00000584760 ESF1Q9H501 851 aaKnown RBP21.16■□□□□ 0.98
SREBF1-223ENST00000584760 PLEKHH2Q8IVE3 1493 aa21.15■□□□□ 0.98
SREBF1-223ENST00000584760 DISP3Q9P2K9 1392 aa21.15■□□□□ 0.98
SREBF1-223ENST00000584760 KIAA1107Q9UPP5 1409 aa21.13■□□□□ 0.97
SREBF1-223ENST00000584760 STRCQ7RTU9 1775 aa21.13■□□□□ 0.97
SREBF1-223ENST00000584760 INO80Q9ULG1 1556 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-223ENST00000584760 ILDR2Q71H61 639 aa21.12■□□□□ 0.97
SREBF1-223ENST00000584760 CFDP1Q9UEE9 299 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-223ENST00000584760 ZNF777Q9ULD5 760 aaPredicted RBP21.11■□□□□ 0.97
SREBF1-223ENST00000584760 PTPRTO14522 1441 aa21.07■□□□□ 0.96
SREBF1-223ENST00000584760 ATP7AQ04656 1500 aa21.07■□□□□ 0.96
SREBF1-223ENST00000584760 SETD1BQ9UPS6 1966 aaKnown RBP21.06■□□□□ 0.96
SREBF1-223ENST00000584760 MBD5Q9P267 1494 aa21.06■□□□□ 0.96
SREBF1-223ENST00000584760 AGLP35573 1532 aa21.05■□□□□ 0.96
SREBF1-223ENST00000584760 CAMSAP2Q08AD1 1489 aa21.05■□□□□ 0.96
SREBF1-223ENST00000584760 C3P01024 1663 aa21.05■□□□□ 0.96
SREBF1-223ENST00000584760 HNRNPMP52272 730 aaKnown RBP eCLIP21.04■□□□□ 0.96
SREBF1-223ENST00000584760 ZNF644Q9H582 1327 aaPredicted RBP21.04■□□□□ 0.96
SREBF1-223ENST00000584760 KANK4Q5T7N3 995 aaPredicted RBP21.03■□□□□ 0.96
SREBF1-223ENST00000584760 SOCS7O14512 581 aa21.02■□□□□ 0.96
SREBF1-223ENST00000584760 PLXNC1O60486 1568 aa21.02■□□□□ 0.95
SREBF1-223ENST00000584760 ADGBQ8N7X0 1667 aa21■□□□□ 0.95
SREBF1-223ENST00000584760 ARHGEF5Q12774 1597 aa21■□□□□ 0.95
SREBF1-223ENST00000584760 SPAG9O60271 1321 aaKnown RBP21■□□□□ 0.95
SREBF1-223ENST00000584760 CNTLNQ9NXG0 1405 aa20.99■□□□□ 0.95
SREBF1-223ENST00000584760 CCDC141Q6ZP82 1450 aa20.98■□□□□ 0.95
SREBF1-223ENST00000584760 NCOA1Q15788 1441 aa20.97■□□□□ 0.95
SREBF1-223ENST00000584760 LTBP4Q8N2S1 1624 aa20.96■□□□□ 0.95
SREBF1-223ENST00000584760 MYOM3Q5VTT5 1437 aa20.96■□□□□ 0.95
SREBF1-223ENST00000584760 ZMYM3Q14202 1370 aa20.95■□□□□ 0.94
SREBF1-223ENST00000584760 NCKAP5LQ9HCH0 1330 aa20.94■□□□□ 0.94
SREBF1-223ENST00000584760 RTEL1-TNFRSF6BF6WH68 1400 aa20.94■□□□□ 0.94
SREBF1-223ENST00000584760 MIA2Q96PC5 1412 aa20.94■□□□□ 0.94
SREBF1-223ENST00000584760 A2MP01023 1474 aa20.94■□□□□ 0.94
SREBF1-223ENST00000584760 NPATQ14207 1427 aa20.92■□□□□ 0.94
SREBF1-223ENST00000584760 APLP2Q06481 763 aa20.91■□□□□ 0.94
SREBF1-223ENST00000584760 CAMSAP1Q5T5Y3 1602 aa20.91■□□□□ 0.94
SREBF1-223ENST00000584760 SPATA31D1Q6ZQQ2 1576 aa20.9■□□□□ 0.94
SREBF1-223ENST00000584760 MAST1Q9Y2H9 1570 aa20.9■□□□□ 0.94
SREBF1-223ENST00000584760 IQSEC2Q5JU85 1478 aa20.89■□□□□ 0.94
SREBF1-223ENST00000584760 ZNF335Q9H4Z2 1342 aaPredicted RBP20.89■□□□□ 0.93
SREBF1-223ENST00000584760 CROCC2H7BZ55 1655 aa20.89■□□□□ 0.93
SREBF1-223ENST00000584760 PTPN23Q9H3S7 1636 aa20.89■□□□□ 0.93
SREBF1-223ENST00000584760 GGT6Q6P531 493 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms