RNA–Protein interactions for RNA: ENST00000584506.1

CDH8-212, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-212ENST00000584506 PCGF6Q9BYE7 350 aa10.25□□□□□ -0.77
CDH8-212ENST00000584506 PTPRGP23470 1445 aa10.24□□□□□ -0.77
CDH8-212ENST00000584506 LRRC9Q6ZRR7 1453 aa10.24□□□□□ -0.77
CDH8-212ENST00000584506 HAX1O00165 279 aa10.24□□□□□ -0.77
CDH8-212ENST00000584506 EPRSP07814 1512 aaKnown RBP10.23□□□□□ -0.77
CDH8-212ENST00000584506 KANK4Q5T7N3 995 aaPredicted RBP10.23□□□□□ -0.77
CDH8-212ENST00000584506 SP7Q8TDD2 431 aaPredicted RBP10.23□□□□□ -0.77
CDH8-212ENST00000584506 ABCA8O94911 1581 aa10.22□□□□□ -0.77
CDH8-212ENST00000584506 PRKAR2AP13861 404 aaKnown RBP10.22□□□□□ -0.77
CDH8-212ENST00000584506 CDK11AQ9UQ88 783 aaPredicted RBP10.22□□□□□ -0.77
CDH8-212ENST00000584506 MTUS2Q5JR59 1369 aa10.22□□□□□ -0.77
CDH8-212ENST00000584506 PLB1Q6P1J6 1458 aa10.21□□□□□ -0.78
CDH8-212ENST00000584506 SUPT6HQ7KZ85 1726 aaKnown RBP10.21□□□□□ -0.78
CDH8-212ENST00000584506 NUP153P49790 1475 aaKnown RBP10.2□□□□□ -0.78
CDH8-212ENST00000584506 ERCC6L2Q5T890 1561 aa10.2□□□□□ -0.78
CDH8-212ENST00000584506 EHBP1L1Q8N3D4 1523 aa10.2□□□□□ -0.78
CDH8-212ENST00000584506 UACAQ9BZF9 1416 aa10.19□□□□□ -0.78
CDH8-212ENST00000584506 PRR29P0C7W0 189 aa10.19□□□□□ -0.78
CDH8-212ENST00000584506 CDK13Q14004 1512 aaKnown RBP10.18□□□□□ -0.78
CDH8-212ENST00000584506 ABCC2Q92887 1545 aa10.16□□□□□ -0.78
CDH8-212ENST00000584506 PLEKHD1A6NEE1 506 aa10.15□□□□□ -0.78
CDH8-212ENST00000584506 UHRF1BP1LA0JNW5 1464 aa10.15□□□□□ -0.78
CDH8-212ENST00000584506 ARID3CA6NKF2 412 aa10.14□□□□□ -0.79
CDH8-212ENST00000584506 ATP10BO94823 1461 aa10.14□□□□□ -0.79
CDH8-212ENST00000584506 RRBP1Q9P2E9 1410 aaKnown RBP10.14□□□□□ -0.79
CDH8-212ENST00000584506 MAGI3Q5TCQ9 1506 aa10.13□□□□□ -0.79
CDH8-212ENST00000584506 NCOA2Q15596 1464 aa10.13□□□□□ -0.79
CDH8-212ENST00000584506 TROQ12816 1431 aaPredicted RBP10.13□□□□□ -0.79
CDH8-212ENST00000584506 ADCY10Q96PN6 1610 aa10.12□□□□□ -0.79
CDH8-212ENST00000584506 CCNB3Q8WWL7 1395 aa10.12□□□□□ -0.79
CDH8-212ENST00000584506 ARHGEF11O15085 1522 aa10.11□□□□□ -0.79
CDH8-212ENST00000584506 PHLDB1Q86UU1 1377 aa10.11□□□□□ -0.79
CDH8-212ENST00000584506 ZCCHC11Q5TAX3 1644 aaKnown RBP10.11□□□□□ -0.79
CDH8-212ENST00000584506 ITSN2Q9NZM3 1697 aa10.1□□□□□ -0.79
CDH8-212ENST00000584506 PROM2Q8N271 834 aa10.1□□□□□ -0.79
CDH8-212ENST00000584506 MYOM3Q5VTT5 1437 aa10.09□□□□□ -0.79
CDH8-212ENST00000584506 KDM5BQ9UGL1 1544 aa10.09□□□□□ -0.79
CDH8-212ENST00000584506 KIF14Q15058 1648 aa10.09□□□□□ -0.79
CDH8-212ENST00000584506 STAG3Q9UJ98 1225 aa10.09□□□□□ -0.79
CDH8-212ENST00000584506 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.09□□□□□ -0.79
CDH8-212ENST00000584506 NPM1P06748 294 aaKnown RBP eCLIP10.08□□□□□ -0.8
CDH8-212ENST00000584506 FKBP8Q14318 412 aa10.08□□□□□ -0.8
CDH8-212ENST00000584506 CHADLQ6NUI6 762 aa10.08□□□□□ -0.8
CDH8-212ENST00000584506 FGD6Q6ZV73 1430 aa10.07□□□□□ -0.8
CDH8-212ENST00000584506 RIMBP3CA6NJZ7 1639 aa10.07□□□□□ -0.8
CDH8-212ENST00000584506 RIMBP3BA6NNM3 1639 aa10.07□□□□□ -0.8
CDH8-212ENST00000584506 RIMBP3Q9UFD9 1639 aa10.07□□□□□ -0.8
CDH8-212ENST00000584506 MIA2Q96PC5 1412 aa10.07□□□□□ -0.8
CDH8-212ENST00000584506 FAM50AQ14320 339 aaKnown RBP10.06□□□□□ -0.8
CDH8-212ENST00000584506 PTPN23Q9H3S7 1636 aa10.06□□□□□ -0.8
CDH8-212ENST00000584506 CDC42BPAQ5VT25 1732 aa10.05□□□□□ -0.8
CDH8-212ENST00000584506 C19orf67A6NJJ6 358 aa10.05□□□□□ -0.8
CDH8-212ENST00000584506 EVX2Q03828 476 aa10.04□□□□□ -0.8
CDH8-212ENST00000584506 TCOF1Q13428 1488 aaKnown RBP10.04□□□□□ -0.8
CDH8-212ENST00000584506 MYO5CQ9NQX4 1742 aa10.03□□□□□ -0.8
CDH8-212ENST00000584506 ABCC10Q5T3U5 1492 aa10.02□□□□□ -0.81
CDH8-212ENST00000584506 GPATCH8Q9UKJ3 1502 aaKnown RBP10.02□□□□□ -0.81
CDH8-212ENST00000584506 ITGAEP38570 1179 aa10.01□□□□□ -0.81
CDH8-212ENST00000584506 CFDP1Q9UEE9 299 aaPredicted RBP10.01□□□□□ -0.81
CDH8-212ENST00000584506 PREX2Q70Z35 1606 aa10□□□□□ -0.81
CDH8-212ENST00000584506 WDR7Q9Y4E6 1490 aa10□□□□□ -0.81
CDH8-212ENST00000584506 CDC42BPBQ9Y5S2 1711 aa10□□□□□ -0.81
CDH8-212ENST00000584506 KCNH8Q96L42 1107 aa10□□□□□ -0.81
CDH8-212ENST00000584506 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.99□□□□□ -0.81
CDH8-212ENST00000584506 CYB5RLQ6IPT4 315 aa9.99□□□□□ -0.81
CDH8-212ENST00000584506 FARP1Q9Y4F1 1045 aaPredicted RBP9.99□□□□□ -0.81
CDH8-212ENST00000584506 ASXL2Q76L83 1435 aa9.98□□□□□ -0.81
CDH8-212ENST00000584506 TTC37Q6PGP7 1564 aa9.97□□□□□ -0.81
CDH8-212ENST00000584506 DNMT1P26358 1616 aaKnown RBP9.97□□□□□ -0.81
CDH8-212ENST00000584506 CAMSAP2Q08AD1 1489 aa9.97□□□□□ -0.81
CDH8-212ENST00000584506 ABCA9Q8IUA7 1624 aa9.96□□□□□ -0.81
CDH8-212ENST00000584506 ZNF777Q9ULD5 760 aaPredicted RBP9.96□□□□□ -0.82
CDH8-212ENST00000584506 ARHGAP5Q13017 1502 aa9.96□□□□□ -0.82
CDH8-212ENST00000584506 RSPH4AQ5TD94 716 aa9.95□□□□□ -0.82
CDH8-212ENST00000584506 MAPKBP1O60336 1514 aa9.95□□□□□ -0.82
CDH8-212ENST00000584506 ARAP3Q8WWN8 1544 aa9.95□□□□□ -0.82
CDH8-212ENST00000584506 CROCC2H7BZ55 1655 aa9.94□□□□□ -0.82
CDH8-212ENST00000584506 PLEKHH2Q8IVE3 1493 aa9.94□□□□□ -0.82
CDH8-212ENST00000584506 PLCH2O75038 1416 aa9.94□□□□□ -0.82
CDH8-212ENST00000584506 SETD5Q9C0A6 1442 aa9.94□□□□□ -0.82
CDH8-212ENST00000584506 EFCAB2Q5VUJ9 269 aa9.94□□□□□ -0.82
CDH8-212ENST00000584506 ADGBQ8N7X0 1667 aa9.93□□□□□ -0.82
CDH8-212ENST00000584506 DAPK1P53355 1430 aa9.93□□□□□ -0.82
CDH8-212ENST00000584506 ZNF644Q9H582 1327 aaPredicted RBP9.93□□□□□ -0.82
CDH8-212ENST00000584506 HRCP23327 699 aa9.93□□□□□ -0.82
CDH8-212ENST00000584506 ZEB1P37275 1124 aaPredicted RBP9.93□□□□□ -0.82
CDH8-212ENST00000584506 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
CDH8-212ENST00000584506 ARHGEF5Q12774 1597 aa9.92□□□□□ -0.82
CDH8-212ENST00000584506 SAMD9LQ8IVG5 1584 aa9.92□□□□□ -0.82
CDH8-212ENST00000584506 ACIN1Q9UKV3 1341 aaKnown RBP9.92□□□□□ -0.82
CDH8-212ENST00000584506 GCC2Q8IWJ2 1684 aa9.92□□□□□ -0.82
CDH8-212ENST00000584506 HFM1A2PYH4 1435 aa9.91□□□□□ -0.82
CDH8-212ENST00000584506 ABCC5O15440 1437 aa9.91□□□□□ -0.82
CDH8-212ENST00000584506 AKNAQ7Z591 1439 aa9.91□□□□□ -0.82
CDH8-212ENST00000584506 TSPY4P0CV99 314 aa9.91□□□□□ -0.82
CDH8-212ENST00000584506 TSPY10P0CW01 314 aa9.91□□□□□ -0.82
CDH8-212ENST00000584506 CD44P16070 742 aaKnown RBP9.91□□□□□ -0.82
CDH8-212ENST00000584506 CREBZFQ9NS37 354 aa9.91□□□□□ -0.82
CDH8-212ENST00000584506 CFAP74Q9C0B2 1584 aa9.91□□□□□ -0.82
CDH8-212ENST00000584506 PTPRKQ15262 1439 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms