RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 MYO5CQ9NQX4 1742 aa12.94□□□□□ -0.34
ERBB2-216ENST00000584014 ARHGAP5Q13017 1502 aa12.93□□□□□ -0.34
ERBB2-216ENST00000584014 TEX14Q8IWB6 1497 aa12.93□□□□□ -0.34
ERBB2-216ENST00000584014 MAP3K1Q13233 1512 aa12.93□□□□□ -0.34
ERBB2-216ENST00000584014 PPRC1Q5VV67 1664 aaKnown RBP12.93□□□□□ -0.34
ERBB2-216ENST00000584014 EFCAB2Q5VUJ9 269 aa12.92□□□□□ -0.34
ERBB2-216ENST00000584014 NCOA2Q15596 1464 aa12.91□□□□□ -0.34
ERBB2-216ENST00000584014 CFDP1Q9UEE9 299 aaPredicted RBP12.91□□□□□ -0.34
ERBB2-216ENST00000584014 FANCAO15360 1455 aa12.91□□□□□ -0.34
ERBB2-216ENST00000584014 CDC42BPAQ5VT25 1732 aa12.91□□□□□ -0.34
ERBB2-216ENST00000584014 PLCH2O75038 1416 aa12.9□□□□□ -0.34
ERBB2-216ENST00000584014 MYT1LQ9UL68 1186 aa12.9□□□□□ -0.34
ERBB2-216ENST00000584014 CDC42BPBQ9Y5S2 1711 aa12.89□□□□□ -0.35
ERBB2-216ENST00000584014 KDM6BO15054 1643 aa12.88□□□□□ -0.35
ERBB2-216ENST00000584014 PREX2Q70Z35 1606 aa12.88□□□□□ -0.35
ERBB2-216ENST00000584014 GPATCH8Q9UKJ3 1502 aaKnown RBP12.88□□□□□ -0.35
ERBB2-216ENST00000584014 AKNAQ7Z591 1439 aa12.87□□□□□ -0.35
ERBB2-216ENST00000584014 ITSN2Q9NZM3 1697 aa12.86□□□□□ -0.35
ERBB2-216ENST00000584014 CFAP74Q9C0B2 1584 aa12.86□□□□□ -0.35
ERBB2-216ENST00000584014 RAPGEF3O95398 923 aa12.86□□□□□ -0.35
ERBB2-216ENST00000584014 ZNF644Q9H582 1327 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-216ENST00000584014 HNRNPMP52272 730 aaKnown RBP eCLIP12.85□□□□□ -0.35
ERBB2-216ENST00000584014 ADGRL1O94910 1474 aa12.85□□□□□ -0.35
ERBB2-216ENST00000584014 NEO1Q92859 1461 aa12.85□□□□□ -0.35
ERBB2-216ENST00000584014 SCAPERQ9BY12 1400 aa12.84□□□□□ -0.35
ERBB2-216ENST00000584014 FAM50AQ14320 339 aaKnown RBP12.83□□□□□ -0.36
ERBB2-216ENST00000584014 PHLDB1Q86UU1 1377 aa12.82□□□□□ -0.36
ERBB2-216ENST00000584014 COL17A1Q9UMD9 1497 aaPredicted RBP12.82□□□□□ -0.36
ERBB2-216ENST00000584014 MYOM3Q5VTT5 1437 aa12.81□□□□□ -0.36
ERBB2-216ENST00000584014 DENND4BO75064 1496 aaPredicted RBP12.81□□□□□ -0.36
ERBB2-216ENST00000584014 SAMD9LQ8IVG5 1584 aa12.81□□□□□ -0.36
ERBB2-216ENST00000584014 ARAP3Q8WWN8 1544 aa12.8□□□□□ -0.36
ERBB2-216ENST00000584014 ITGAEP38570 1179 aa12.8□□□□□ -0.36
ERBB2-216ENST00000584014 AFAP1Q8N556 730 aa12.8□□□□□ -0.36
ERBB2-216ENST00000584014 CAMSAP2Q08AD1 1489 aa12.78□□□□□ -0.36
ERBB2-216ENST00000584014 SYCP2Q9BX26 1530 aa12.78□□□□□ -0.36
ERBB2-216ENST00000584014 ABCC1P33527 1531 aa12.77□□□□□ -0.37
ERBB2-216ENST00000584014 ARHGEF12Q9NZN5 1544 aa12.77□□□□□ -0.37
ERBB2-216ENST00000584014 PTPN23Q9H3S7 1636 aa12.77□□□□□ -0.37
ERBB2-216ENST00000584014 FGD6Q6ZV73 1430 aa12.76□□□□□ -0.37
ERBB2-216ENST00000584014 TRAPPC8Q9Y2L5 1435 aa12.76□□□□□ -0.37
ERBB2-216ENST00000584014 PLEKHH2Q8IVE3 1493 aa12.76□□□□□ -0.37
ERBB2-216ENST00000584014 RICTORQ6R327 1708 aa12.75□□□□□ -0.37
ERBB2-216ENST00000584014 MIA2Q96PC5 1412 aa12.75□□□□□ -0.37
ERBB2-216ENST00000584014 POGZQ7Z3K3 1410 aa12.74□□□□□ -0.37
ERBB2-216ENST00000584014 SPAG9O60271 1321 aaKnown RBP12.74□□□□□ -0.37
ERBB2-216ENST00000584014 TSPY4P0CV99 314 aa12.74□□□□□ -0.37
ERBB2-216ENST00000584014 TSPY10P0CW01 314 aa12.74□□□□□ -0.37
ERBB2-216ENST00000584014 ZNF518AQ6AHZ1 1483 aa12.73□□□□□ -0.37
ERBB2-216ENST00000584014 ARID4BQ4LE39 1312 aaPredicted RBP12.73□□□□□ -0.37
ERBB2-216ENST00000584014 CHIC2Q9UKJ5 165 aa12.73□□□□□ -0.37
ERBB2-216ENST00000584014 FRMPD1Q5SYB0 1578 aa12.73□□□□□ -0.37
ERBB2-216ENST00000584014 KIAA1107Q9UPP5 1409 aa12.71□□□□□ -0.37
ERBB2-216ENST00000584014 YEATS2Q9ULM3 1422 aa12.7□□□□□ -0.38
ERBB2-216ENST00000584014 ZFYVE16Q7Z3T8 1539 aa12.69□□□□□ -0.38
ERBB2-216ENST00000584014 RSPH4AQ5TD94 716 aa12.69□□□□□ -0.38
ERBB2-216ENST00000584014 CCDC141Q6ZP82 1450 aa12.69□□□□□ -0.38
ERBB2-216ENST00000584014 MBD5Q9P267 1494 aa12.69□□□□□ -0.38
ERBB2-216ENST00000584014 HECW2Q9P2P5 1572 aa12.69□□□□□ -0.38
ERBB2-216ENST00000584014 MLECQ14165 292 aa12.68□□□□□ -0.38
ERBB2-216ENST00000584014 TCOF1Q13428 1488 aaKnown RBP12.66□□□□□ -0.38
ERBB2-216ENST00000584014 ARHGEF5Q12774 1597 aa12.66□□□□□ -0.38
ERBB2-216ENST00000584014 DAPK1P53355 1430 aa12.66□□□□□ -0.38
ERBB2-216ENST00000584014 RRP7BPQ9NSQ0 103 aa12.66□□□□□ -0.38
ERBB2-216ENST00000584014 ATP7AQ04656 1500 aa12.66□□□□□ -0.38
ERBB2-216ENST00000584014 ZMYM4Q5VZL5 1548 aa12.66□□□□□ -0.38
ERBB2-216ENST00000584014 KIDINS220Q9ULH0 1771 aa12.66□□□□□ -0.38
ERBB2-216ENST00000584014 KDM5CP41229 1560 aa12.65□□□□□ -0.38
ERBB2-216ENST00000584014 ABCC5O15440 1437 aa12.65□□□□□ -0.38
ERBB2-216ENST00000584014 C9orf84Q5VXU9 1444 aa12.65□□□□□ -0.38
ERBB2-216ENST00000584014 DNMT1P26358 1616 aaKnown RBP12.65□□□□□ -0.38
ERBB2-216ENST00000584014 ABCA6Q8N139 1617 aa12.64□□□□□ -0.39
ERBB2-216ENST00000584014 MAGI2Q86UL8 1455 aa12.64□□□□□ -0.39
ERBB2-216ENST00000584014 MLH3Q9UHC1 1453 aa12.64□□□□□ -0.39
ERBB2-216ENST00000584014 ARHGEF40Q8TER5 1519 aa12.63□□□□□ -0.39
ERBB2-216ENST00000584014 ATP10AO60312 1499 aa12.63□□□□□ -0.39
ERBB2-216ENST00000584014 CROCC2H7BZ55 1655 aa12.62□□□□□ -0.39
ERBB2-216ENST00000584014 INO80Q9ULG1 1556 aaPredicted RBP12.62□□□□□ -0.39
ERBB2-216ENST00000584014 DIP2CQ9Y2E4 1556 aa12.62□□□□□ -0.39
ERBB2-216ENST00000584014 RRBP1Q9P2E9 1410 aaKnown RBP12.62□□□□□ -0.39
ERBB2-216ENST00000584014 ANKRD30AQ9BXX3 1397 aa12.6□□□□□ -0.39
ERBB2-216ENST00000584014 RTEL1-TNFRSF6BF6WH68 1400 aa12.6□□□□□ -0.39
ERBB2-216ENST00000584014 KIF3BO15066 747 aa12.59□□□□□ -0.39
ERBB2-216ENST00000584014 GGT6Q6P531 493 aa12.59□□□□□ -0.39
ERBB2-216ENST00000584014 ESF1Q9H501 851 aaKnown RBP12.59□□□□□ -0.39
ERBB2-216ENST00000584014 A2MP01023 1474 aa12.59□□□□□ -0.39
ERBB2-216ENST00000584014 KIF15Q9NS87 1388 aa12.58□□□□□ -0.4
ERBB2-216ENST00000584014 ADGBQ8N7X0 1667 aa12.58□□□□□ -0.4
ERBB2-216ENST00000584014 PTPRKQ15262 1439 aa12.58□□□□□ -0.4
ERBB2-216ENST00000584014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.58□□□□□ -0.4
ERBB2-216ENST00000584014 SIGLEC1Q9BZZ2 1709 aa12.57□□□□□ -0.4
ERBB2-216ENST00000584014 MAST1Q9Y2H9 1570 aa12.57□□□□□ -0.4
ERBB2-216ENST00000584014 SHANK2Q9UPX8 1470 aa12.57□□□□□ -0.4
ERBB2-216ENST00000584014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.56□□□□□ -0.4
ERBB2-216ENST00000584014 DHX29Q7Z478 1369 aaKnown RBP12.56□□□□□ -0.4
ERBB2-216ENST00000584014 NCOA1Q15788 1441 aa12.54□□□□□ -0.4
ERBB2-216ENST00000584014 PLXNC1O60486 1568 aa12.53□□□□□ -0.4
ERBB2-216ENST00000584014 DUOX2Q9NRD8 1548 aa12.52□□□□□ -0.4
ERBB2-216ENST00000584014 KDM4FA0A1W2PPD8 638 aa12.52□□□□□ -0.41
ERBB2-216ENST00000584014 BCORL1Q5H9F3 1711 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms