RNA–Protein interactions for RNA: ENST00000583972.1

SUPT6H-209, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 2

Gene SUPT6H, Length 1,969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-209ENST00000583972 MYO5CQ9NQX4 1742 aa18.28■□□□□ 0.52
SUPT6H-209ENST00000583972 ZMYM4Q5VZL5 1548 aa18.25■□□□□ 0.51
SUPT6H-209ENST00000583972 PLCH2O75038 1416 aa18.25■□□□□ 0.51
SUPT6H-209ENST00000583972 TROQ12816 1431 aaPredicted RBP18.25■□□□□ 0.51
SUPT6H-209ENST00000583972 ADAMTSL3P82987 1691 aa18.25■□□□□ 0.51
SUPT6H-209ENST00000583972 ZNF316A6NFI3 1004 aaPredicted RBP18.24■□□□□ 0.51
SUPT6H-209ENST00000583972 CASKIN1Q8WXD9 1431 aa18.24■□□□□ 0.51
SUPT6H-209ENST00000583972 HECW2Q9P2P5 1572 aa18.23■□□□□ 0.51
SUPT6H-209ENST00000583972 BCORL1Q5H9F3 1711 aa18.23■□□□□ 0.51
SUPT6H-209ENST00000583972 CCDC18Q5T9S5 1454 aa18.21■□□□□ 0.51
SUPT6H-209ENST00000583972 POGZQ7Z3K3 1410 aa18.21■□□□□ 0.51
SUPT6H-209ENST00000583972 KANK4Q5T7N3 995 aaPredicted RBP18.21■□□□□ 0.5
SUPT6H-209ENST00000583972 CDK11AQ9UQ88 783 aaPredicted RBP18.21■□□□□ 0.5
SUPT6H-209ENST00000583972 ZFYVE16Q7Z3T8 1539 aa18.2■□□□□ 0.5
SUPT6H-209ENST00000583972 SIGLEC1Q9BZZ2 1709 aa18.2■□□□□ 0.5
SUPT6H-209ENST00000583972 FYCO1Q9BQS8 1478 aa18.2■□□□□ 0.5
SUPT6H-209ENST00000583972 MADDQ8WXG6 1647 aa18.19■□□□□ 0.5
SUPT6H-209ENST00000583972 RRBP1Q9P2E9 1410 aaKnown RBP18.19■□□□□ 0.5
SUPT6H-209ENST00000583972 SCAPERQ9BY12 1400 aa18.18■□□□□ 0.5
SUPT6H-209ENST00000583972 YEATS2Q9ULM3 1422 aa18.18■□□□□ 0.5
SUPT6H-209ENST00000583972 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
SUPT6H-209ENST00000583972 ARHGAP5Q13017 1502 aa18.17■□□□□ 0.5
SUPT6H-209ENST00000583972 CDC42BPBQ9Y5S2 1711 aa18.16■□□□□ 0.5
SUPT6H-209ENST00000583972 PTPRMP28827 1452 aa18.16■□□□□ 0.5
SUPT6H-209ENST00000583972 CLSPNQ9HAW4 1339 aa18.16■□□□□ 0.5
SUPT6H-209ENST00000583972 PREX2Q70Z35 1606 aa18.15■□□□□ 0.5
SUPT6H-209ENST00000583972 MAGI2Q86UL8 1455 aa18.15■□□□□ 0.5
SUPT6H-209ENST00000583972 ARID4BQ4LE39 1312 aaPredicted RBP18.13■□□□□ 0.49
SUPT6H-209ENST00000583972 RIMS1Q86UR5 1692 aaKnown RBP18.12■□□□□ 0.49
SUPT6H-209ENST00000583972 EFCAB2Q5VUJ9 269 aa18.12■□□□□ 0.49
SUPT6H-209ENST00000583972 MAP3K1Q13233 1512 aa18.12■□□□□ 0.49
SUPT6H-209ENST00000583972 ACIN1Q9UKV3 1341 aaKnown RBP18.11■□□□□ 0.49
SUPT6H-209ENST00000583972 KDM5CP41229 1560 aa18.11■□□□□ 0.49
SUPT6H-209ENST00000583972 CDC42BPAQ5VT25 1732 aa18.11■□□□□ 0.49
SUPT6H-209ENST00000583972 ZNF518AQ6AHZ1 1483 aa18.1■□□□□ 0.49
SUPT6H-209ENST00000583972 ABCC1P33527 1531 aa18.09■□□□□ 0.49
SUPT6H-209ENST00000583972 DHX57Q6P158 1386 aaKnown RBP18.09■□□□□ 0.49
SUPT6H-209ENST00000583972 ITSN2Q9NZM3 1697 aa18.08■□□□□ 0.48
SUPT6H-209ENST00000583972 CCNB3Q8WWL7 1395 aa18.07■□□□□ 0.48
SUPT6H-209ENST00000583972 CENPBP07199 599 aaPredicted RBP18.06■□□□□ 0.48
SUPT6H-209ENST00000583972 C9orf84Q5VXU9 1444 aa18.06■□□□□ 0.48
SUPT6H-209ENST00000583972 TIAM1Q13009 1591 aa18.06■□□□□ 0.48
SUPT6H-209ENST00000583972 ARHGEF12Q9NZN5 1544 aa18.05■□□□□ 0.48
SUPT6H-209ENST00000583972 FER1L4A9Z1Z3 1794 aa18.05■□□□□ 0.48
SUPT6H-209ENST00000583972 ATP10AO60312 1499 aa18.05■□□□□ 0.48
SUPT6H-209ENST00000583972 NEUROD1Q13562 356 aa18.04■□□□□ 0.48
SUPT6H-209ENST00000583972 DIP2CQ9Y2E4 1556 aa18.04■□□□□ 0.48
SUPT6H-209ENST00000583972 ABCA6Q8N139 1617 aa18.04■□□□□ 0.48
SUPT6H-209ENST00000583972 AFAP1Q8N556 730 aa18.02■□□□□ 0.48
SUPT6H-209ENST00000583972 TRAPPC8Q9Y2L5 1435 aa18.02■□□□□ 0.48
SUPT6H-209ENST00000583972 SAMD9LQ8IVG5 1584 aa18.02■□□□□ 0.48
SUPT6H-209ENST00000583972 GPATCH8Q9UKJ3 1502 aaKnown RBP18■□□□□ 0.47
SUPT6H-209ENST00000583972 LMTK3Q96Q04 1460 aa17.99■□□□□ 0.47
SUPT6H-209ENST00000583972 MLH3Q9UHC1 1453 aa17.99■□□□□ 0.47
SUPT6H-209ENST00000583972 REREQ9P2R6 1566 aa17.99■□□□□ 0.47
SUPT6H-209ENST00000583972 MLECQ14165 292 aa17.99■□□□□ 0.47
SUPT6H-209ENST00000583972 SYCP2Q9BX26 1530 aa17.98■□□□□ 0.47
SUPT6H-209ENST00000583972 LRRC9Q6ZRR7 1453 aa17.98■□□□□ 0.47
SUPT6H-209ENST00000583972 KIDINS220Q9ULH0 1771 aa17.97■□□□□ 0.47
SUPT6H-209ENST00000583972 EHBP1L1Q8N3D4 1523 aa17.97■□□□□ 0.47
SUPT6H-209ENST00000583972 MTUS2Q5JR59 1369 aa17.96■□□□□ 0.47
SUPT6H-209ENST00000583972 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
SUPT6H-209ENST00000583972 MYT1LQ9UL68 1186 aa17.93■□□□□ 0.46
SUPT6H-209ENST00000583972 ZNF777Q9ULD5 760 aaPredicted RBP17.93■□□□□ 0.46
SUPT6H-209ENST00000583972 AGLP35573 1532 aa17.91■□□□□ 0.46
SUPT6H-209ENST00000583972 INO80Q9ULG1 1556 aaPredicted RBP17.9■□□□□ 0.46
SUPT6H-209ENST00000583972 MIER1Q8N108 512 aa17.9■□□□□ 0.46
SUPT6H-209ENST00000583972 PLEKHH2Q8IVE3 1493 aa17.89■□□□□ 0.45
SUPT6H-209ENST00000583972 KIAA1107Q9UPP5 1409 aa17.88■□□□□ 0.45
SUPT6H-209ENST00000583972 ATP7AQ04656 1500 aa17.88■□□□□ 0.45
SUPT6H-209ENST00000583972 CFDP1Q9UEE9 299 aaPredicted RBP17.88■□□□□ 0.45
SUPT6H-209ENST00000583972 RAB3GAP2Q9H2M9 1393 aa17.87■□□□□ 0.45
SUPT6H-209ENST00000583972 HNRNPMP52272 730 aaKnown RBP eCLIP17.86■□□□□ 0.45
SUPT6H-209ENST00000583972 PREX1Q8TCU6 1659 aa17.86■□□□□ 0.45
SUPT6H-209ENST00000583972 ITGAEP38570 1179 aa17.86■□□□□ 0.45
SUPT6H-209ENST00000583972 SUPT6HQ7KZ85 1726 aaKnown RBP17.86■□□□□ 0.45
SUPT6H-209ENST00000583972 ILDR1Q86SU0 546 aaPredicted RBP17.84■□□□□ 0.45
SUPT6H-209ENST00000583972 GTF3C3Q9Y5Q9 886 aa17.84■□□□□ 0.45
SUPT6H-209ENST00000583972 C3P01024 1663 aa17.84■□□□□ 0.45
SUPT6H-209ENST00000583972 PLXNC1O60486 1568 aa17.84■□□□□ 0.45
SUPT6H-209ENST00000583972 SPAG9O60271 1321 aaKnown RBP17.84■□□□□ 0.45
SUPT6H-209ENST00000583972 NCOA2Q15596 1464 aa17.84■□□□□ 0.45
SUPT6H-209ENST00000583972 HSPA2P54652 639 aa17.84■□□□□ 0.45
SUPT6H-209ENST00000583972 SETD5Q9C0A6 1442 aa17.84■□□□□ 0.45
SUPT6H-209ENST00000583972 CEBPAP49715 358 aaPredicted RBP17.83■□□□□ 0.44
SUPT6H-209ENST00000583972 PELP1Q8IZL8 1130 aaKnown RBP17.83■□□□□ 0.44
SUPT6H-209ENST00000583972 ZNF644Q9H582 1327 aaPredicted RBP17.82■□□□□ 0.44
SUPT6H-209ENST00000583972 MBD5Q9P267 1494 aa17.82■□□□□ 0.44
SUPT6H-209ENST00000583972 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.8■□□□□ 0.44
SUPT6H-209ENST00000583972 CAMSAP2Q08AD1 1489 aa17.79■□□□□ 0.44
SUPT6H-209ENST00000583972 ADGBQ8N7X0 1667 aa17.79■□□□□ 0.44
SUPT6H-209ENST00000583972 A2MP01023 1474 aa17.78■□□□□ 0.44
SUPT6H-209ENST00000583972 MROH2AA6NES4 1674 aa17.77■□□□□ 0.44
SUPT6H-209ENST00000583972 FAM50AQ14320 339 aaKnown RBP17.77■□□□□ 0.43
SUPT6H-209ENST00000583972 YTHDC1Q96MU7 727 aaKnown RBP17.77■□□□□ 0.43
SUPT6H-209ENST00000583972 CNTLNQ9NXG0 1405 aa17.76■□□□□ 0.43
SUPT6H-209ENST00000583972 UHRF1BP1Q6BDS2 1440 aa17.75■□□□□ 0.43
SUPT6H-209ENST00000583972 CCDC141Q6ZP82 1450 aa17.75■□□□□ 0.43
SUPT6H-209ENST00000583972 CLTCQ00610 1675 aaKnown RBP17.74■□□□□ 0.43
SUPT6H-209ENST00000583972 SETD1BQ9UPS6 1966 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms