RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 POGZQ7Z3K3 1410 aa22.38■■□□□ 1.17
CCDC57-218ENST00000583593 ATP1B4Q9UN42 357 aaPredicted RBP22.37■■□□□ 1.17
CCDC57-218ENST00000583593 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
CCDC57-218ENST00000583593 MYO5CQ9NQX4 1742 aa22.36■■□□□ 1.17
CCDC57-218ENST00000583593 KIF14Q15058 1648 aa22.35■■□□□ 1.17
CCDC57-218ENST00000583593 LRRIQ1Q96JM4 1722 aa22.34■■□□□ 1.17
CCDC57-218ENST00000583593 FBXO41Q8TF61 875 aa22.33■■□□□ 1.17
CCDC57-218ENST00000583593 EFCAB2Q5VUJ9 269 aa22.32■■□□□ 1.16
CCDC57-218ENST00000583593 MLECQ14165 292 aa22.31■■□□□ 1.16
CCDC57-218ENST00000583593 FER1L4A9Z1Z3 1794 aa22.3■■□□□ 1.16
CCDC57-218ENST00000583593 PLPPR3Q6T4P5 718 aa22.3■■□□□ 1.16
CCDC57-218ENST00000583593 CDK11AQ9UQ88 783 aaPredicted RBP22.3■■□□□ 1.16
CCDC57-218ENST00000583593 TROQ12816 1431 aaPredicted RBP22.3■■□□□ 1.16
CCDC57-218ENST00000583593 ATP10AO60312 1499 aa22.29■■□□□ 1.16
CCDC57-218ENST00000583593 HSPA2P54652 639 aa22.29■■□□□ 1.16
CCDC57-218ENST00000583593 ARHGEF12Q9NZN5 1544 aa22.26■■□□□ 1.15
CCDC57-218ENST00000583593 C9orf84Q5VXU9 1444 aa22.26■■□□□ 1.15
CCDC57-218ENST00000583593 ARHGAP5Q13017 1502 aa22.24■■□□□ 1.15
CCDC57-218ENST00000583593 KDM5CP41229 1560 aa22.24■■□□□ 1.15
CCDC57-218ENST00000583593 CDC42BPBQ9Y5S2 1711 aa22.23■■□□□ 1.15
CCDC57-218ENST00000583593 AFAP1Q8N556 730 aa22.23■■□□□ 1.15
CCDC57-218ENST00000583593 ZNF518AQ6AHZ1 1483 aa22.22■■□□□ 1.15
CCDC57-218ENST00000583593 CLIP1P30622 1438 aa22.22■■□□□ 1.15
CCDC57-218ENST00000583593 DIP2CQ9Y2E4 1556 aa22.17■■□□□ 1.14
CCDC57-218ENST00000583593 CASKIN1Q8WXD9 1431 aa22.17■■□□□ 1.14
CCDC57-218ENST00000583593 CEBPAP49715 358 aaPredicted RBP22.16■■□□□ 1.14
CCDC57-218ENST00000583593 PREX2Q70Z35 1606 aa22.16■■□□□ 1.14
CCDC57-218ENST00000583593 PREX1Q8TCU6 1659 aa22.14■■□□□ 1.14
CCDC57-218ENST00000583593 ABCA6Q8N139 1617 aa22.14■■□□□ 1.14
CCDC57-218ENST00000583593 REREQ9P2R6 1566 aa22.14■■□□□ 1.13
CCDC57-218ENST00000583593 CCDC18Q5T9S5 1454 aa22.14■■□□□ 1.13
CCDC57-218ENST00000583593 MLH3Q9UHC1 1453 aa22.14■■□□□ 1.13
CCDC57-218ENST00000583593 ABCC1P33527 1531 aa22.13■■□□□ 1.13
CCDC57-218ENST00000583593 TRAPPC8Q9Y2L5 1435 aa22.13■■□□□ 1.13
CCDC57-218ENST00000583593 CDC42BPAQ5VT25 1732 aa22.11■■□□□ 1.13
CCDC57-218ENST00000583593 ITSN2Q9NZM3 1697 aa22.11■■□□□ 1.13
CCDC57-218ENST00000583593 MYT1LQ9UL68 1186 aa22.09■■□□□ 1.13
CCDC57-218ENST00000583593 KIDINS220Q9ULH0 1771 aa22.07■■□□□ 1.12
CCDC57-218ENST00000583593 STRCQ7RTU9 1775 aa22.07■■□□□ 1.12
CCDC57-218ENST00000583593 AGLP35573 1532 aa22.06■■□□□ 1.12
CCDC57-218ENST00000583593 CERKQ8TCT0 537 aa22.06■■□□□ 1.12
CCDC57-218ENST00000583593 FYCO1Q9BQS8 1478 aa22.06■■□□□ 1.12
CCDC57-218ENST00000583593 C3P01024 1663 aa22.05■■□□□ 1.12
CCDC57-218ENST00000583593 SETD1BQ9UPS6 1966 aaKnown RBP22.05■■□□□ 1.12
CCDC57-218ENST00000583593 UHRF1BP1Q6BDS2 1440 aa22.02■■□□□ 1.12
CCDC57-218ENST00000583593 SAMD9LQ8IVG5 1584 aa22.01■■□□□ 1.11
CCDC57-218ENST00000583593 GPATCH8Q9UKJ3 1502 aaKnown RBP22■■□□□ 1.11
CCDC57-218ENST00000583593 SYCP2Q9BX26 1530 aa21.96■■□□□ 1.11
CCDC57-218ENST00000583593 ZNF777Q9ULD5 760 aaPredicted RBP21.96■■□□□ 1.11
CCDC57-218ENST00000583593 HNRNPMP52272 730 aaKnown RBP eCLIP21.94■■□□□ 1.1
CCDC57-218ENST00000583593 DMRT2Q9Y5R5 561 aa21.93■■□□□ 1.1
CCDC57-218ENST00000583593 ESF1Q9H501 851 aaKnown RBP21.92■■□□□ 1.1
CCDC57-218ENST00000583593 CNTLNQ9NXG0 1405 aa21.91■■□□□ 1.1
CCDC57-218ENST00000583593 KIAA1107Q9UPP5 1409 aa21.9■■□□□ 1.1
CCDC57-218ENST00000583593 SPAG9O60271 1321 aaKnown RBP21.9■■□□□ 1.1
CCDC57-218ENST00000583593 SUPT6HQ7KZ85 1726 aaKnown RBP21.9■■□□□ 1.1
CCDC57-218ENST00000583593 MROH2AA6NES4 1674 aa21.89■■□□□ 1.1
CCDC57-218ENST00000583593 PTPRTO14522 1441 aa21.89■■□□□ 1.09
CCDC57-218ENST00000583593 INO80Q9ULG1 1556 aaPredicted RBP21.88■■□□□ 1.09
CCDC57-218ENST00000583593 CFDP1Q9UEE9 299 aaPredicted RBP21.88■■□□□ 1.09
CCDC57-218ENST00000583593 ATP7AQ04656 1500 aa21.88■■□□□ 1.09
CCDC57-218ENST00000583593 PLXNC1O60486 1568 aa21.87■■□□□ 1.09
CCDC57-218ENST00000583593 ZMYM3Q14202 1370 aa21.86■■□□□ 1.09
CCDC57-218ENST00000583593 CCNB3Q8WWL7 1395 aa21.86■■□□□ 1.09
CCDC57-218ENST00000583593 PLEKHH2Q8IVE3 1493 aa21.85■■□□□ 1.09
CCDC57-218ENST00000583593 NPATQ14207 1427 aa21.84■■□□□ 1.09
CCDC57-218ENST00000583593 NCOA1Q15788 1441 aa21.84■■□□□ 1.09
CCDC57-218ENST00000583593 A2MP01023 1474 aa21.83■■□□□ 1.09
CCDC57-218ENST00000583593 MTUS2Q5JR59 1369 aa21.83■■□□□ 1.08
CCDC57-218ENST00000583593 CLTCQ00610 1675 aaKnown RBP21.82■■□□□ 1.08
CCDC57-218ENST00000583593 LTBP4Q8N2S1 1624 aa21.82■■□□□ 1.08
CCDC57-218ENST00000583593 TIAM1Q13009 1591 aa21.82■■□□□ 1.08
CCDC57-218ENST00000583593 ZNF644Q9H582 1327 aaPredicted RBP21.81■■□□□ 1.08
CCDC57-218ENST00000583593 CAMSAP1Q5T5Y3 1602 aa21.8■■□□□ 1.08
CCDC57-218ENST00000583593 MBD5Q9P267 1494 aa21.79■■□□□ 1.08
CCDC57-218ENST00000583593 ADGBQ8N7X0 1667 aa21.77■■□□□ 1.08
CCDC57-218ENST00000583593 EHBP1L1Q8N3D4 1523 aa21.76■■□□□ 1.07
CCDC57-218ENST00000583593 PTPRKQ15262 1439 aa21.76■■□□□ 1.07
CCDC57-218ENST00000583593 GGT6Q6P531 493 aa21.76■■□□□ 1.07
CCDC57-218ENST00000583593 MYO3AQ8NEV4 1616 aa21.75■■□□□ 1.07
CCDC57-218ENST00000583593 ZNF142P52746 1687 aaPredicted RBP21.75■■□□□ 1.07
CCDC57-218ENST00000583593 CEP162Q5TB80 1403 aa21.74■■□□□ 1.07
CCDC57-218ENST00000583593 NCKAP5LQ9HCH0 1330 aa21.73■■□□□ 1.07
CCDC57-218ENST00000583593 RTEL1-TNFRSF6BF6WH68 1400 aa21.71■■□□□ 1.07
CCDC57-218ENST00000583593 CEP170BQ9Y4F5 1589 aaPredicted RBP21.7■■□□□ 1.06
CCDC57-218ENST00000583593 PPP6R1Q9UPN7 881 aa21.7■■□□□ 1.06
CCDC57-218ENST00000583593 IQSEC2Q5JU85 1478 aa21.7■■□□□ 1.06
CCDC57-218ENST00000583593 DHX29Q7Z478 1369 aaKnown RBP21.68■■□□□ 1.06
CCDC57-218ENST00000583593 PLA2R1Q13018 1463 aa21.68■■□□□ 1.06
CCDC57-218ENST00000583593 TCOF1Q13428 1488 aaKnown RBP21.67■■□□□ 1.06
CCDC57-218ENST00000583593 NCOA2Q15596 1464 aa21.65■■□□□ 1.06
CCDC57-218ENST00000583593 ZNF335Q9H4Z2 1342 aaPredicted RBP21.65■■□□□ 1.06
CCDC57-218ENST00000583593 PKD2Q13563 968 aa21.64■■□□□ 1.05
CCDC57-218ENST00000583593 CCDC141Q6ZP82 1450 aa21.64■■□□□ 1.05
CCDC57-218ENST00000583593 CAMSAP2Q08AD1 1489 aa21.63■■□□□ 1.05
CCDC57-218ENST00000583593 ILDR2Q71H61 639 aa21.62■■□□□ 1.05
CCDC57-218ENST00000583593 DNMT1P26358 1616 aaKnown RBP21.62■■□□□ 1.05
CCDC57-218ENST00000583593 DISP3Q9P2K9 1392 aa21.61■■□□□ 1.05
CCDC57-218ENST00000583593 A2ML1A8K2U0 1454 aa21.61■■□□□ 1.05
CCDC57-218ENST00000583593 KIF3BO15066 747 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms