RNA–Protein interactions for RNA: ENST00000583053.1

CCDC57-217, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC57, Length 188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-217ENST00000583053 GPATCH8Q9UKJ3 1502 aaKnown RBP21.64■■□□□ 1.05
CCDC57-217ENST00000583053 CCNB3Q8WWL7 1395 aa21.63■■□□□ 1.05
CCDC57-217ENST00000583053 TIAM1Q13009 1591 aa21.63■■□□□ 1.05
CCDC57-217ENST00000583053 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
CCDC57-217ENST00000583053 POGZQ7Z3K3 1410 aa21.63■■□□□ 1.05
CCDC57-217ENST00000583053 PREX2Q70Z35 1606 aa21.62■■□□□ 1.05
CCDC57-217ENST00000583053 KDM4FA0A1W2PPD8 638 aa21.62■■□□□ 1.05
CCDC57-217ENST00000583053 RICTORQ6R327 1708 aa21.6■■□□□ 1.05
CCDC57-217ENST00000583053 CDC42BPBQ9Y5S2 1711 aa21.6■■□□□ 1.05
CCDC57-217ENST00000583053 MAP3K1Q13233 1512 aa21.6■■□□□ 1.05
CCDC57-217ENST00000583053 CFDP1Q9UEE9 299 aaPredicted RBP21.6■■□□□ 1.05
CCDC57-217ENST00000583053 ZNF777Q9ULD5 760 aaPredicted RBP21.59■■□□□ 1.05
CCDC57-217ENST00000583053 LRRC9Q6ZRR7 1453 aa21.58■■□□□ 1.04
CCDC57-217ENST00000583053 MAGI2Q86UL8 1455 aa21.58■■□□□ 1.04
CCDC57-217ENST00000583053 ZMYM4Q5VZL5 1548 aa21.57■■□□□ 1.04
CCDC57-217ENST00000583053 APLP2Q06481 763 aa21.57■■□□□ 1.04
CCDC57-217ENST00000583053 AFAP1Q8N556 730 aa21.57■■□□□ 1.04
CCDC57-217ENST00000583053 CDC42BPAQ5VT25 1732 aa21.57■■□□□ 1.04
CCDC57-217ENST00000583053 ZNF518AQ6AHZ1 1483 aa21.57■■□□□ 1.04
CCDC57-217ENST00000583053 KANK4Q5T7N3 995 aaPredicted RBP21.56■■□□□ 1.04
CCDC57-217ENST00000583053 NCOA2Q15596 1464 aa21.55■■□□□ 1.04
CCDC57-217ENST00000583053 ABCC1P33527 1531 aa21.54■■□□□ 1.04
CCDC57-217ENST00000583053 ARHGEF12Q9NZN5 1544 aa21.53■■□□□ 1.04
CCDC57-217ENST00000583053 YEATS2Q9ULM3 1422 aa21.52■■□□□ 1.04
CCDC57-217ENST00000583053 TRAPPC8Q9Y2L5 1435 aa21.52■■□□□ 1.04
CCDC57-217ENST00000583053 ZFYVE16Q7Z3T8 1539 aa21.51■■□□□ 1.03
CCDC57-217ENST00000583053 ARHGEF40Q8TER5 1519 aa21.51■■□□□ 1.03
CCDC57-217ENST00000583053 SUPT6HQ7KZ85 1726 aaKnown RBP21.51■■□□□ 1.03
CCDC57-217ENST00000583053 SAMD9LQ8IVG5 1584 aa21.5■■□□□ 1.03
CCDC57-217ENST00000583053 KIAA1107Q9UPP5 1409 aa21.5■■□□□ 1.03
CCDC57-217ENST00000583053 HNRNPMP52272 730 aaKnown RBP eCLIP21.5■■□□□ 1.03
CCDC57-217ENST00000583053 PLEKHH2Q8IVE3 1493 aa21.5■■□□□ 1.03
CCDC57-217ENST00000583053 KDM5CP41229 1560 aa21.49■■□□□ 1.03
CCDC57-217ENST00000583053 MYT1LQ9UL68 1186 aa21.49■■□□□ 1.03
CCDC57-217ENST00000583053 ARID4BQ4LE39 1312 aaPredicted RBP21.49■■□□□ 1.03
CCDC57-217ENST00000583053 ZNF644Q9H582 1327 aaPredicted RBP21.47■■□□□ 1.03
CCDC57-217ENST00000583053 MLH3Q9UHC1 1453 aa21.46■■□□□ 1.03
CCDC57-217ENST00000583053 ITSN2Q9NZM3 1697 aa21.46■■□□□ 1.03
CCDC57-217ENST00000583053 SYCP2Q9BX26 1530 aa21.45■■□□□ 1.02
CCDC57-217ENST00000583053 ATP10AO60312 1499 aa21.45■■□□□ 1.02
CCDC57-217ENST00000583053 HECW2Q9P2P5 1572 aa21.42■■□□□ 1.02
CCDC57-217ENST00000583053 C9orf84Q5VXU9 1444 aa21.41■■□□□ 1.02
CCDC57-217ENST00000583053 SPAG9O60271 1321 aaKnown RBP21.41■■□□□ 1.02
CCDC57-217ENST00000583053 MBD5Q9P267 1494 aa21.39■■□□□ 1.02
CCDC57-217ENST00000583053 RSPH4AQ5TD94 716 aa21.38■■□□□ 1.01
CCDC57-217ENST00000583053 MYOM3Q5VTT5 1437 aa21.38■■□□□ 1.01
CCDC57-217ENST00000583053 CAMSAP2Q08AD1 1489 aa21.37■■□□□ 1.01
CCDC57-217ENST00000583053 MIA2Q96PC5 1412 aa21.37■■□□□ 1.01
CCDC57-217ENST00000583053 DIP2CQ9Y2E4 1556 aa21.36■■□□□ 1.01
CCDC57-217ENST00000583053 BCORL1Q5H9F3 1711 aa21.34■■□□□ 1.01
CCDC57-217ENST00000583053 ABCA6Q8N139 1617 aa21.33■■□□□ 1.01
CCDC57-217ENST00000583053 MLECQ14165 292 aa21.33■■□□□ 1.01
CCDC57-217ENST00000583053 ADAMTSL3P82987 1691 aa21.33■■□□□ 1
CCDC57-217ENST00000583053 KIDINS220Q9ULH0 1771 aa21.33■■□□□ 1
CCDC57-217ENST00000583053 REREQ9P2R6 1566 aa21.32■■□□□ 1
CCDC57-217ENST00000583053 SIGLEC1Q9BZZ2 1709 aa21.32■■□□□ 1
CCDC57-217ENST00000583053 ATP7AQ04656 1500 aa21.31■■□□□ 1
CCDC57-217ENST00000583053 CCDC141Q6ZP82 1450 aa21.31■■□□□ 1
CCDC57-217ENST00000583053 RTEL1-TNFRSF6BF6WH68 1400 aa21.3■■□□□ 1
CCDC57-217ENST00000583053 TSPY4P0CV99 314 aa21.29■■□□□ 1
CCDC57-217ENST00000583053 TSPY10P0CW01 314 aa21.29■■□□□ 1
CCDC57-217ENST00000583053 INO80Q9ULG1 1556 aaPredicted RBP21.28■■□□□ 1
CCDC57-217ENST00000583053 PTPRMP28827 1452 aa21.27■■□□□ 1
CCDC57-217ENST00000583053 AGLP35573 1532 aa21.27■■□□□ 1
CCDC57-217ENST00000583053 ARHGEF5Q12774 1597 aa21.27■□□□□ 0.99
CCDC57-217ENST00000583053 MADDQ8WXG6 1647 aa21.26■□□□□ 0.99
CCDC57-217ENST00000583053 FGD6Q6ZV73 1430 aa21.24■□□□□ 0.99
CCDC57-217ENST00000583053 A2MP01023 1474 aa21.24■□□□□ 0.99
CCDC57-217ENST00000583053 DHX29Q7Z478 1369 aaKnown RBP21.2■□□□□ 0.98
CCDC57-217ENST00000583053 TCOF1Q13428 1488 aaKnown RBP21.2■□□□□ 0.98
CCDC57-217ENST00000583053 PTPN23Q9H3S7 1636 aa21.19■□□□□ 0.98
CCDC57-217ENST00000583053 PLXNC1O60486 1568 aa21.19■□□□□ 0.98
CCDC57-217ENST00000583053 RIMS1Q86UR5 1692 aaKnown RBP21.18■□□□□ 0.98
CCDC57-217ENST00000583053 ESF1Q9H501 851 aaKnown RBP21.17■□□□□ 0.98
CCDC57-217ENST00000583053 PPARGC1BQ86YN6 1023 aaKnown RBP21.16■□□□□ 0.98
CCDC57-217ENST00000583053 ADGBQ8N7X0 1667 aa21.15■□□□□ 0.98
CCDC57-217ENST00000583053 ABCC5O15440 1437 aa21.15■□□□□ 0.98
CCDC57-217ENST00000583053 MAST1Q9Y2H9 1570 aa21.14■□□□□ 0.98
CCDC57-217ENST00000583053 GGT6Q6P531 493 aa21.14■□□□□ 0.97
CCDC57-217ENST00000583053 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
CCDC57-217ENST00000583053 FER1L4A9Z1Z3 1794 aa21.13■□□□□ 0.97
CCDC57-217ENST00000583053 FAM50AQ14320 339 aaKnown RBP21.13■□□□□ 0.97
CCDC57-217ENST00000583053 DAPK1P53355 1430 aa21.12■□□□□ 0.97
CCDC57-217ENST00000583053 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
CCDC57-217ENST00000583053 KIF3BO15066 747 aa21.11■□□□□ 0.97
CCDC57-217ENST00000583053 CEBPAP49715 358 aaPredicted RBP21.11■□□□□ 0.97
CCDC57-217ENST00000583053 SHANK2Q9UPX8 1470 aa21.11■□□□□ 0.97
CCDC57-217ENST00000583053 CNTLNQ9NXG0 1405 aa21.11■□□□□ 0.97
CCDC57-217ENST00000583053 DNMT1P26358 1616 aaKnown RBP21.08■□□□□ 0.97
CCDC57-217ENST00000583053 RRP7BPQ9NSQ0 103 aa21.06■□□□□ 0.96
CCDC57-217ENST00000583053 CHIC2Q9UKJ5 165 aa21.06■□□□□ 0.96
CCDC57-217ENST00000583053 ZMYM3Q14202 1370 aa21.04■□□□□ 0.96
CCDC57-217ENST00000583053 KIF15Q9NS87 1388 aa21.04■□□□□ 0.96
CCDC57-217ENST00000583053 CROCC2H7BZ55 1655 aa21.03■□□□□ 0.96
CCDC57-217ENST00000583053 ANKRD30AQ9BXX3 1397 aa21.03■□□□□ 0.96
CCDC57-217ENST00000583053 DUOX2Q9NRD8 1548 aa21.03■□□□□ 0.96
CCDC57-217ENST00000583053 NCOA1Q15788 1441 aa21■□□□□ 0.95
CCDC57-217ENST00000583053 LMTK3Q96Q04 1460 aa21■□□□□ 0.95
CCDC57-217ENST00000583053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.99■□□□□ 0.95
CCDC57-217ENST00000583053 WASHC2CQ9Y4E1 1318 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms