RNA–Protein interactions for RNA: ENST00000582994.1

TTC39B-209, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 4

Gene TTC39B, Length 567 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-209ENST00000582994 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
TTC39B-209ENST00000582994 UBTFP17480 764 aaKnown RBP12.52□□□□□ -0.41
TTC39B-209ENST00000582994 CFAP43Q8NDM7 1665 aa12.51□□□□□ -0.41
TTC39B-209ENST00000582994 KCNH8Q96L42 1107 aa12.49□□□□□ -0.41
TTC39B-209ENST00000582994 HRCP23327 699 aa12.47□□□□□ -0.41
TTC39B-209ENST00000582994 ILDR1Q86SU0 546 aaPredicted RBP12.47□□□□□ -0.41
TTC39B-209ENST00000582994 HECW2Q9P2P5 1572 aa12.47□□□□□ -0.41
TTC39B-209ENST00000582994 ATP10BO94823 1461 aa12.46□□□□□ -0.42
TTC39B-209ENST00000582994 ARAP3Q8WWN8 1544 aa12.45□□□□□ -0.42
TTC39B-209ENST00000582994 P3H3Q8IVL6 736 aa12.43□□□□□ -0.42
TTC39B-209ENST00000582994 SAMD9Q5K651 1589 aa12.43□□□□□ -0.42
TTC39B-209ENST00000582994 ARID3CA6NKF2 412 aa12.42□□□□□ -0.42
TTC39B-209ENST00000582994 PHLDB1Q86UU1 1377 aa12.42□□□□□ -0.42
TTC39B-209ENST00000582994 ABCA9Q8IUA7 1624 aa12.41□□□□□ -0.42
TTC39B-209ENST00000582994 CLIP1P30622 1438 aa12.41□□□□□ -0.42
TTC39B-209ENST00000582994 RAPGEF6Q8TEU7 1601 aa12.38□□□□□ -0.43
TTC39B-209ENST00000582994 PPARGC1BQ86YN6 1023 aaKnown RBP12.38□□□□□ -0.43
TTC39B-209ENST00000582994 NEO1Q92859 1461 aa12.38□□□□□ -0.43
TTC39B-209ENST00000582994 NUP153P49790 1475 aaKnown RBP12.37□□□□□ -0.43
TTC39B-209ENST00000582994 RAPGEF3O95398 923 aa12.35□□□□□ -0.43
TTC39B-209ENST00000582994 FHOD3Q2V2M9 1422 aa12.34□□□□□ -0.43
TTC39B-209ENST00000582994 FRMPD1Q5SYB0 1578 aa12.34□□□□□ -0.43
TTC39B-209ENST00000582994 PTPRMP28827 1452 aa12.34□□□□□ -0.43
TTC39B-209ENST00000582994 ADAMTSL3P82987 1691 aa12.33□□□□□ -0.44
TTC39B-209ENST00000582994 VPS8Q8N3P4 1428 aa12.32□□□□□ -0.44
TTC39B-209ENST00000582994 PROM2Q8N271 834 aa12.3□□□□□ -0.44
TTC39B-209ENST00000582994 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
TTC39B-209ENST00000582994 RANGAP1P46060 587 aaPredicted RBP12.29□□□□□ -0.44
TTC39B-209ENST00000582994 DENND4BO75064 1496 aaPredicted RBP12.28□□□□□ -0.44
TTC39B-209ENST00000582994 ARHGEF40Q8TER5 1519 aa12.28□□□□□ -0.44
TTC39B-209ENST00000582994 PLEKHD1A6NEE1 506 aa12.28□□□□□ -0.44
TTC39B-209ENST00000582994 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
TTC39B-209ENST00000582994 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
TTC39B-209ENST00000582994 SPDYE2Q495Y8 402 aa12.28□□□□□ -0.44
TTC39B-209ENST00000582994 BCORL1Q5H9F3 1711 aa12.28□□□□□ -0.44
TTC39B-209ENST00000582994 EFCAB5A4FU69 1503 aa12.27□□□□□ -0.44
TTC39B-209ENST00000582994 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
TTC39B-209ENST00000582994 AKNAQ7Z591 1439 aa12.27□□□□□ -0.45
TTC39B-209ENST00000582994 FANCAO15360 1455 aa12.27□□□□□ -0.45
TTC39B-209ENST00000582994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.27□□□□□ -0.45
TTC39B-209ENST00000582994 MADDQ8WXG6 1647 aa12.26□□□□□ -0.45
TTC39B-209ENST00000582994 ARID4BQ4LE39 1312 aaPredicted RBP12.26□□□□□ -0.45
TTC39B-209ENST00000582994 PCF11O94913 1555 aaKnown RBP12.24□□□□□ -0.45
TTC39B-209ENST00000582994 ZMYM4Q5VZL5 1548 aa12.24□□□□□ -0.45
TTC39B-209ENST00000582994 TTC37Q6PGP7 1564 aa12.24□□□□□ -0.45
TTC39B-209ENST00000582994 RICTORQ6R327 1708 aa12.24□□□□□ -0.45
TTC39B-209ENST00000582994 LMTK3Q96Q04 1460 aa12.24□□□□□ -0.45
TTC39B-209ENST00000582994 CFAP74Q9C0B2 1584 aa12.24□□□□□ -0.45
TTC39B-209ENST00000582994 CDK13Q14004 1512 aaKnown RBP12.22□□□□□ -0.45
TTC39B-209ENST00000582994 FBXO41Q8TF61 875 aa12.22□□□□□ -0.45
TTC39B-209ENST00000582994 YEATS2Q9ULM3 1422 aa12.21□□□□□ -0.45
TTC39B-209ENST00000582994 ZEB1P37275 1124 aaPredicted RBP12.21□□□□□ -0.45
TTC39B-209ENST00000582994 ZFYVE16Q7Z3T8 1539 aa12.21□□□□□ -0.46
TTC39B-209ENST00000582994 MAGI2Q86UL8 1455 aa12.21□□□□□ -0.46
TTC39B-209ENST00000582994 POGZQ7Z3K3 1410 aa12.2□□□□□ -0.46
TTC39B-209ENST00000582994 PLCH2O75038 1416 aa12.2□□□□□ -0.46
TTC39B-209ENST00000582994 RIMS1Q86UR5 1692 aaKnown RBP12.19□□□□□ -0.46
TTC39B-209ENST00000582994 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
TTC39B-209ENST00000582994 ARHGAP35Q9NRY4 1499 aa12.18□□□□□ -0.46
TTC39B-209ENST00000582994 SCAPERQ9BY12 1400 aa12.18□□□□□ -0.46
TTC39B-209ENST00000582994 HECW1Q76N89 1606 aa12.18□□□□□ -0.46
TTC39B-209ENST00000582994 SIGLEC1Q9BZZ2 1709 aa12.17□□□□□ -0.46
TTC39B-209ENST00000582994 FMN1Q68DA7 1419 aa12.17□□□□□ -0.46
TTC39B-209ENST00000582994 HSPA2P54652 639 aa12.14□□□□□ -0.47
TTC39B-209ENST00000582994 EFCAB2Q5VUJ9 269 aa12.13□□□□□ -0.47
TTC39B-209ENST00000582994 ATP10AO60312 1499 aa12.13□□□□□ -0.47
TTC39B-209ENST00000582994 C9orf84Q5VXU9 1444 aa12.12□□□□□ -0.47
TTC39B-209ENST00000582994 ARHGEF12Q9NZN5 1544 aa12.12□□□□□ -0.47
TTC39B-209ENST00000582994 MLECQ14165 292 aa12.12□□□□□ -0.47
TTC39B-209ENST00000582994 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
TTC39B-209ENST00000582994 CDK11AQ9UQ88 783 aaPredicted RBP12.12□□□□□ -0.47
TTC39B-209ENST00000582994 TROQ12816 1431 aaPredicted RBP12.11□□□□□ -0.47
TTC39B-209ENST00000582994 ATP1B4Q9UN42 357 aaPredicted RBP12.11□□□□□ -0.47
TTC39B-209ENST00000582994 KIF14Q15058 1648 aa12.11□□□□□ -0.47
TTC39B-209ENST00000582994 ZNF518AQ6AHZ1 1483 aa12.1□□□□□ -0.47
TTC39B-209ENST00000582994 FER1L4A9Z1Z3 1794 aa12.1□□□□□ -0.47
TTC39B-209ENST00000582994 KDM5CP41229 1560 aa12.09□□□□□ -0.47
TTC39B-209ENST00000582994 MYO5CQ9NQX4 1742 aa12.09□□□□□ -0.47
TTC39B-209ENST00000582994 VASPP50552 380 aaPredicted RBP12.09□□□□□ -0.47
TTC39B-209ENST00000582994 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
TTC39B-209ENST00000582994 CCER1Q8TC90 406 aaPredicted RBP12.08□□□□□ -0.48
TTC39B-209ENST00000582994 ARHGAP5Q13017 1502 aa12.07□□□□□ -0.48
TTC39B-209ENST00000582994 TIAM1Q13009 1591 aa12.07□□□□□ -0.48
TTC39B-209ENST00000582994 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
TTC39B-209ENST00000582994 AFAP1Q8N556 730 aa12.06□□□□□ -0.48
TTC39B-209ENST00000582994 REREQ9P2R6 1566 aa12.05□□□□□ -0.48
TTC39B-209ENST00000582994 DIP2CQ9Y2E4 1556 aa12.05□□□□□ -0.48
TTC39B-209ENST00000582994 MLH3Q9UHC1 1453 aa12.04□□□□□ -0.48
TTC39B-209ENST00000582994 CEBPAP49715 358 aaPredicted RBP12.04□□□□□ -0.48
TTC39B-209ENST00000582994 CERKQ8TCT0 537 aa12.04□□□□□ -0.48
TTC39B-209ENST00000582994 PREX1Q8TCU6 1659 aa12.03□□□□□ -0.48
TTC39B-209ENST00000582994 CASKIN1Q8WXD9 1431 aa12.03□□□□□ -0.48
TTC39B-209ENST00000582994 LRRIQ1Q96JM4 1722 aa12.03□□□□□ -0.48
TTC39B-209ENST00000582994 MAP3K1Q13233 1512 aa12.03□□□□□ -0.48
TTC39B-209ENST00000582994 CCDC18Q5T9S5 1454 aa12.02□□□□□ -0.48
TTC39B-209ENST00000582994 FYCO1Q9BQS8 1478 aa12.02□□□□□ -0.48
TTC39B-209ENST00000582994 ABCC1P33527 1531 aa12.02□□□□□ -0.48
TTC39B-209ENST00000582994 UHRF1BP1Q6BDS2 1440 aa12.02□□□□□ -0.49
TTC39B-209ENST00000582994 TRAPPC8Q9Y2L5 1435 aa12.02□□□□□ -0.49
TTC39B-209ENST00000582994 AGLP35573 1532 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms