RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 TTC37Q6PGP7 1564 aa9.5□□□□□ -0.89
PPP4R1-223ENST00000582933 KIF14Q15058 1648 aa9.49□□□□□ -0.89
PPP4R1-223ENST00000582933 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.48□□□□□ -0.89
PPP4R1-223ENST00000582933 PLEKHD1A6NEE1 506 aa9.48□□□□□ -0.89
PPP4R1-223ENST00000582933 KCNH8Q96L42 1107 aa9.48□□□□□ -0.89
PPP4R1-223ENST00000582933 ATP1B4Q9UN42 357 aaPredicted RBP9.48□□□□□ -0.89
PPP4R1-223ENST00000582933 KDM6BO15054 1643 aa9.47□□□□□ -0.89
PPP4R1-223ENST00000582933 CDK11AQ9UQ88 783 aaPredicted RBP9.47□□□□□ -0.89
PPP4R1-223ENST00000582933 ARAP3Q8WWN8 1544 aa9.46□□□□□ -0.9
PPP4R1-223ENST00000582933 TSPOAP1O95153 1857 aa9.45□□□□□ -0.9
PPP4R1-223ENST00000582933 EIF5BO60841 1220 aaKnown RBP9.45□□□□□ -0.9
PPP4R1-223ENST00000582933 NEO1Q92859 1461 aa9.45□□□□□ -0.9
PPP4R1-223ENST00000582933 EHBP1L1Q8N3D4 1523 aa9.45□□□□□ -0.9
PPP4R1-223ENST00000582933 TIAM1Q13009 1591 aa9.44□□□□□ -0.9
PPP4R1-223ENST00000582933 CFAP74Q9C0B2 1584 aa9.44□□□□□ -0.9
PPP4R1-223ENST00000582933 FANCAO15360 1455 aa9.43□□□□□ -0.9
PPP4R1-223ENST00000582933 COL17A1Q9UMD9 1497 aaPredicted RBP9.43□□□□□ -0.9
PPP4R1-223ENST00000582933 PHLDB1Q86UU1 1377 aa9.43□□□□□ -0.9
PPP4R1-223ENST00000582933 MAP3K1Q13233 1512 aa9.42□□□□□ -0.9
PPP4R1-223ENST00000582933 PLCH2O75038 1416 aa9.42□□□□□ -0.9
PPP4R1-223ENST00000582933 MTUS2Q5JR59 1369 aa9.41□□□□□ -0.9
PPP4R1-223ENST00000582933 DCAF8L1A6NGE4 600 aa9.41□□□□□ -0.9
PPP4R1-223ENST00000582933 PREX2Q70Z35 1606 aa9.41□□□□□ -0.9
PPP4R1-223ENST00000582933 MYO5CQ9NQX4 1742 aa9.4□□□□□ -0.9
PPP4R1-223ENST00000582933 SCAF1Q9H7N4 1312 aaKnown RBP9.4□□□□□ -0.9
PPP4R1-223ENST00000582933 SLC4A1APQ9BWU0 796 aaKnown RBP9.4□□□□□ -0.9
PPP4R1-223ENST00000582933 FRMPD1Q5SYB0 1578 aa9.4□□□□□ -0.9
PPP4R1-223ENST00000582933 NPM3O75607 178 aaKnown RBP9.39□□□□□ -0.91
PPP4R1-223ENST00000582933 ARHGAP5Q13017 1502 aa9.39□□□□□ -0.91
PPP4R1-223ENST00000582933 LRRC9Q6ZRR7 1453 aa9.39□□□□□ -0.91
PPP4R1-223ENST00000582933 ADGRL1O94910 1474 aa9.38□□□□□ -0.91
PPP4R1-223ENST00000582933 POGZQ7Z3K3 1410 aa9.38□□□□□ -0.91
PPP4R1-223ENST00000582933 AKNAQ7Z591 1439 aa9.38□□□□□ -0.91
PPP4R1-223ENST00000582933 ZMYM4Q5VZL5 1548 aa9.37□□□□□ -0.91
PPP4R1-223ENST00000582933 GPATCH8Q9UKJ3 1502 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-223ENST00000582933 DENND4BO75064 1496 aaPredicted RBP9.37□□□□□ -0.91
PPP4R1-223ENST00000582933 ABCC1P33527 1531 aa9.36□□□□□ -0.91
PPP4R1-223ENST00000582933 NCOA2Q15596 1464 aa9.36□□□□□ -0.91
PPP4R1-223ENST00000582933 CNKSR2Q8WXI2 1034 aa9.36□□□□□ -0.91
PPP4R1-223ENST00000582933 CDC42BPAQ5VT25 1732 aa9.35□□□□□ -0.91
PPP4R1-223ENST00000582933 EFCAB2Q5VUJ9 269 aa9.35□□□□□ -0.91
PPP4R1-223ENST00000582933 SUPT6HQ7KZ85 1726 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-223ENST00000582933 ARHGEF40Q8TER5 1519 aa9.35□□□□□ -0.91
PPP4R1-223ENST00000582933 CCNB3Q8WWL7 1395 aa9.35□□□□□ -0.91
PPP4R1-223ENST00000582933 RICTORQ6R327 1708 aa9.34□□□□□ -0.91
PPP4R1-223ENST00000582933 ITSN2Q9NZM3 1697 aa9.34□□□□□ -0.91
PPP4R1-223ENST00000582933 ZNF518AQ6AHZ1 1483 aa9.34□□□□□ -0.91
PPP4R1-223ENST00000582933 CDC42BPBQ9Y5S2 1711 aa9.34□□□□□ -0.92
PPP4R1-223ENST00000582933 KDM5CP41229 1560 aa9.33□□□□□ -0.92
PPP4R1-223ENST00000582933 SAMD9LQ8IVG5 1584 aa9.33□□□□□ -0.92
PPP4R1-223ENST00000582933 SCAPERQ9BY12 1400 aa9.33□□□□□ -0.92
PPP4R1-223ENST00000582933 PLEKHH2Q8IVE3 1493 aa9.33□□□□□ -0.92
PPP4R1-223ENST00000582933 SYCP2Q9BX26 1530 aa9.32□□□□□ -0.92
PPP4R1-223ENST00000582933 MAGI2Q86UL8 1455 aa9.32□□□□□ -0.92
PPP4R1-223ENST00000582933 KIAA1107Q9UPP5 1409 aa9.31□□□□□ -0.92
PPP4R1-223ENST00000582933 ARHGEF12Q9NZN5 1544 aa9.31□□□□□ -0.92
PPP4R1-223ENST00000582933 RAPGEF3O95398 923 aa9.31□□□□□ -0.92
PPP4R1-223ENST00000582933 KANK4Q5T7N3 995 aaPredicted RBP9.31□□□□□ -0.92
PPP4R1-223ENST00000582933 ARXQ96QS3 562 aa9.31□□□□□ -0.92
PPP4R1-223ENST00000582933 ZFYVE16Q7Z3T8 1539 aa9.31□□□□□ -0.92
PPP4R1-223ENST00000582933 HECW2Q9P2P5 1572 aa9.3□□□□□ -0.92
PPP4R1-223ENST00000582933 CFDP1Q9UEE9 299 aaPredicted RBP9.3□□□□□ -0.92
PPP4R1-223ENST00000582933 MYOM3Q5VTT5 1437 aa9.3□□□□□ -0.92
PPP4R1-223ENST00000582933 CAMSAP2Q08AD1 1489 aa9.29□□□□□ -0.92
PPP4R1-223ENST00000582933 YEATS2Q9ULM3 1422 aa9.29□□□□□ -0.92
PPP4R1-223ENST00000582933 TRAPPC8Q9Y2L5 1435 aa9.29□□□□□ -0.92
PPP4R1-223ENST00000582933 MIA2Q96PC5 1412 aa9.28□□□□□ -0.92
PPP4R1-223ENST00000582933 MLH3Q9UHC1 1453 aa9.28□□□□□ -0.92
PPP4R1-223ENST00000582933 MBD5Q9P267 1494 aa9.27□□□□□ -0.93
PPP4R1-223ENST00000582933 INO80Q9ULG1 1556 aaPredicted RBP9.26□□□□□ -0.93
PPP4R1-223ENST00000582933 DIP2CQ9Y2E4 1556 aa9.26□□□□□ -0.93
PPP4R1-223ENST00000582933 CCDC141Q6ZP82 1450 aa9.26□□□□□ -0.93
PPP4R1-223ENST00000582933 ARHGEF5Q12774 1597 aa9.25□□□□□ -0.93
PPP4R1-223ENST00000582933 REREQ9P2R6 1566 aa9.25□□□□□ -0.93
PPP4R1-223ENST00000582933 C9orf84Q5VXU9 1444 aa9.25□□□□□ -0.93
PPP4R1-223ENST00000582933 FGD6Q6ZV73 1430 aa9.25□□□□□ -0.93
PPP4R1-223ENST00000582933 ABCA6Q8N139 1617 aa9.25□□□□□ -0.93
PPP4R1-223ENST00000582933 AFAP1Q8N556 730 aa9.25□□□□□ -0.93
PPP4R1-223ENST00000582933 ZNF777Q9ULD5 760 aaPredicted RBP9.25□□□□□ -0.93
PPP4R1-223ENST00000582933 ZNF644Q9H582 1327 aaPredicted RBP9.25□□□□□ -0.93
PPP4R1-223ENST00000582933 ATP7AQ04656 1500 aa9.25□□□□□ -0.93
PPP4R1-223ENST00000582933 ATP10AO60312 1499 aa9.23□□□□□ -0.93
PPP4R1-223ENST00000582933 TCOF1Q13428 1488 aaKnown RBP9.23□□□□□ -0.93
PPP4R1-223ENST00000582933 KIDINS220Q9ULH0 1771 aa9.22□□□□□ -0.93
PPP4R1-223ENST00000582933 PLXNC1O60486 1568 aa9.22□□□□□ -0.93
PPP4R1-223ENST00000582933 HNRNPMP52272 730 aaKnown RBP eCLIP9.22□□□□□ -0.93
PPP4R1-223ENST00000582933 PTPN23Q9H3S7 1636 aa9.22□□□□□ -0.93
PPP4R1-223ENST00000582933 SPAG9O60271 1321 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-223ENST00000582933 SHANK2Q9UPX8 1470 aa9.21□□□□□ -0.93
PPP4R1-223ENST00000582933 SIGLEC1Q9BZZ2 1709 aa9.21□□□□□ -0.94
PPP4R1-223ENST00000582933 RTEL1-TNFRSF6BF6WH68 1400 aa9.21□□□□□ -0.94
PPP4R1-223ENST00000582933 AGLP35573 1532 aa9.21□□□□□ -0.94
PPP4R1-223ENST00000582933 MAST1Q9Y2H9 1570 aa9.2□□□□□ -0.94
PPP4R1-223ENST00000582933 BCORL1Q5H9F3 1711 aa9.19□□□□□ -0.94
PPP4R1-223ENST00000582933 KDM4FA0A1W2PPD8 638 aa9.19□□□□□ -0.94
PPP4R1-223ENST00000582933 DNMT1P26358 1616 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-223ENST00000582933 CROCC2H7BZ55 1655 aa9.19□□□□□ -0.94
PPP4R1-223ENST00000582933 ADAMTSL3P82987 1691 aa9.19□□□□□ -0.94
PPP4R1-223ENST00000582933 A2MP01023 1474 aa9.18□□□□□ -0.94
PPP4R1-223ENST00000582933 RSPH4AQ5TD94 716 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms