RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 HFM1A2PYH4 1435 aa33.19■■■□□ 2.9
CCDC47-204ENST00000582252 MAPKBP1O60336 1514 aa33.19■■■□□ 2.9
CCDC47-204ENST00000582252 MYO5CQ9NQX4 1742 aa33.19■■■□□ 2.9
CCDC47-204ENST00000582252 PREX2Q70Z35 1606 aa33.17■■■□□ 2.9
CCDC47-204ENST00000582252 KCNH8Q96L42 1107 aa33.16■■■□□ 2.9
CCDC47-204ENST00000582252 ZNF316A6NFI3 1004 aaPredicted RBP33.15■■■□□ 2.9
CCDC47-204ENST00000582252 CDC42BPBQ9Y5S2 1711 aa33.13■■■□□ 2.89
CCDC47-204ENST00000582252 PTPRKQ15262 1439 aa33.13■■■□□ 2.89
CCDC47-204ENST00000582252 ABCA9Q8IUA7 1624 aa33.11■■■□□ 2.89
CCDC47-204ENST00000582252 CFDP1Q9UEE9 299 aaPredicted RBP33.11■■■□□ 2.89
CCDC47-204ENST00000582252 AKNAQ7Z591 1439 aa33.09■■■□□ 2.89
CCDC47-204ENST00000582252 GCC2Q8IWJ2 1684 aa33.07■■■□□ 2.88
CCDC47-204ENST00000582252 NAIPQ13075 1403 aa33.05■■■□□ 2.88
CCDC47-204ENST00000582252 CAMSAP2Q08AD1 1489 aa33.04■■■□□ 2.88
CCDC47-204ENST00000582252 ARAP3Q8WWN8 1544 aa33.02■■■□□ 2.88
CCDC47-204ENST00000582252 ARHGAP5Q13017 1502 aa33.02■■■□□ 2.88
CCDC47-204ENST00000582252 PLCH2O75038 1416 aa33.01■■■□□ 2.87
CCDC47-204ENST00000582252 DIEXFQ68CQ4 756 aaKnown RBP32.99■■■□□ 2.87
CCDC47-204ENST00000582252 DNMT1P26358 1616 aaKnown RBP32.99■■■□□ 2.87
CCDC47-204ENST00000582252 DNAJC5Q9H3Z4 198 aa32.97■■■□□ 2.87
CCDC47-204ENST00000582252 SAMD9LQ8IVG5 1584 aa32.95■■■□□ 2.87
CCDC47-204ENST00000582252 ZNF777Q9ULD5 760 aaPredicted RBP32.95■■■□□ 2.87
CCDC47-204ENST00000582252 ZNF644Q9H582 1327 aaPredicted RBP32.94■■■□□ 2.86
CCDC47-204ENST00000582252 ACIN1Q9UKV3 1341 aaKnown RBP32.94■■■□□ 2.86
CCDC47-204ENST00000582252 DAPK1P53355 1430 aa32.93■■■□□ 2.86
CCDC47-204ENST00000582252 GLI2P10070 1586 aa32.91■■■□□ 2.86
CCDC47-204ENST00000582252 ROCK1Q13464 1354 aa32.9■■■□□ 2.86
CCDC47-204ENST00000582252 TIMELESSQ9UNS1 1208 aa32.89■■■□□ 2.86
CCDC47-204ENST00000582252 PLEKHH2Q8IVE3 1493 aa32.89■■■□□ 2.86
CCDC47-204ENST00000582252 DIP2BQ9P265 1576 aa32.89■■■□□ 2.85
CCDC47-204ENST00000582252 EFCAB2Q5VUJ9 269 aa32.88■■■□□ 2.85
CCDC47-204ENST00000582252 CROCC2H7BZ55 1655 aa32.87■■■□□ 2.85
CCDC47-204ENST00000582252 ARHGEF5Q12774 1597 aa32.86■■■□□ 2.85
CCDC47-204ENST00000582252 CD109Q6YHK3 1445 aa32.85■■■□□ 2.85
CCDC47-204ENST00000582252 MAP3K4Q9Y6R4 1608 aa32.85■■■□□ 2.85
CCDC47-204ENST00000582252 ABCC5O15440 1437 aa32.83■■■□□ 2.85
CCDC47-204ENST00000582252 CHIC2Q9UKJ5 165 aa32.83■■■□□ 2.85
CCDC47-204ENST00000582252 FANCAO15360 1455 aa32.83■■■□□ 2.85
CCDC47-204ENST00000582252 CFAP74Q9C0B2 1584 aa32.83■■■□□ 2.85
CCDC47-204ENST00000582252 KIAA1107Q9UPP5 1409 aa32.82■■■□□ 2.84
CCDC47-204ENST00000582252 RRP7BPQ9NSQ0 103 aa32.82■■■□□ 2.84
CCDC47-204ENST00000582252 ABCC1P33527 1531 aa32.81■■■□□ 2.84
CCDC47-204ENST00000582252 SYCP2Q9BX26 1530 aa32.81■■■□□ 2.84
CCDC47-204ENST00000582252 ADGBQ8N7X0 1667 aa32.8■■■□□ 2.84
CCDC47-204ENST00000582252 MBD5Q9P267 1494 aa32.79■■■□□ 2.84
CCDC47-204ENST00000582252 CCDC141Q6ZP82 1450 aa32.76■■■□□ 2.84
CCDC47-204ENST00000582252 SHANK2Q9UPX8 1470 aa32.76■■■□□ 2.84
CCDC47-204ENST00000582252 RSPH4AQ5TD94 716 aa32.76■■■□□ 2.83
CCDC47-204ENST00000582252 KIF13AQ9H1H9 1805 aa32.75■■■□□ 2.83
CCDC47-204ENST00000582252 FAM69CQ0P6D2 419 aa32.72■■■□□ 2.83
CCDC47-204ENST00000582252 HNRNPMP52272 730 aaKnown RBP eCLIP32.71■■■□□ 2.83
CCDC47-204ENST00000582252 SIN3AQ96ST3 1273 aa32.71■■■□□ 2.83
CCDC47-204ENST00000582252 NEUROD1Q13562 356 aa32.7■■■□□ 2.83
CCDC47-204ENST00000582252 KDM6BO15054 1643 aa32.69■■■□□ 2.82
CCDC47-204ENST00000582252 ARHGEF12Q9NZN5 1544 aa32.69■■■□□ 2.82
CCDC47-204ENST00000582252 ADGRL1O94910 1474 aa32.68■■■□□ 2.82
CCDC47-204ENST00000582252 ADGRL2O95490 1459 aa32.68■■■□□ 2.82
CCDC47-204ENST00000582252 NEO1Q92859 1461 aa32.67■■■□□ 2.82
CCDC47-204ENST00000582252 C9orf84Q5VXU9 1444 aa32.66■■■□□ 2.82
CCDC47-204ENST00000582252 MAST1Q9Y2H9 1570 aa32.66■■■□□ 2.82
CCDC47-204ENST00000582252 TSPY4P0CV99 314 aa32.65■■■□□ 2.82
CCDC47-204ENST00000582252 TSPY10P0CW01 314 aa32.65■■■□□ 2.82
CCDC47-204ENST00000582252 TSPOAP1O95153 1857 aa32.64■■■□□ 2.82
CCDC47-204ENST00000582252 TRIM52Q96A61 297 aa32.64■■■□□ 2.82
CCDC47-204ENST00000582252 PPRC1Q5VV67 1664 aaKnown RBP32.6■■■□□ 2.81
CCDC47-204ENST00000582252 TONSLQ96HA7 1378 aa32.6■■■□□ 2.81
CCDC47-204ENST00000582252 ANKRD30AQ9BXX3 1397 aa32.6■■■□□ 2.81
CCDC47-204ENST00000582252 NCOA1Q15788 1441 aa32.6■■■□□ 2.81
CCDC47-204ENST00000582252 SCAPERQ9BY12 1400 aa32.6■■■□□ 2.81
CCDC47-204ENST00000582252 TRAPPC8Q9Y2L5 1435 aa32.58■■■□□ 2.81
CCDC47-204ENST00000582252 TEX14Q8IWB6 1497 aa32.58■■■□□ 2.81
CCDC47-204ENST00000582252 PLXNC1O60486 1568 aa32.53■■■□□ 2.8
CCDC47-204ENST00000582252 MPHOSPH9Q99550 1183 aa32.52■■■□□ 2.8
CCDC47-204ENST00000582252 ZNF518AQ6AHZ1 1483 aa32.52■■■□□ 2.8
CCDC47-204ENST00000582252 PPP1R15AO75807 674 aaPredicted RBP32.51■■■□□ 2.79
CCDC47-204ENST00000582252 DENND4BO75064 1496 aaPredicted RBP32.49■■■□□ 2.79
CCDC47-204ENST00000582252 POGZQ7Z3K3 1410 aa32.48■■■□□ 2.79
CCDC47-204ENST00000582252 RTEL1-TNFRSF6BF6WH68 1400 aa32.48■■■□□ 2.79
CCDC47-204ENST00000582252 ZFYVE16Q7Z3T8 1539 aa32.47■■■□□ 2.79
CCDC47-204ENST00000582252 INO80Q9ULG1 1556 aaPredicted RBP32.47■■■□□ 2.79
CCDC47-204ENST00000582252 SPAG9O60271 1321 aaKnown RBP32.46■■■□□ 2.79
CCDC47-204ENST00000582252 KIF15Q9NS87 1388 aa32.46■■■□□ 2.79
CCDC47-204ENST00000582252 AFAP1Q8N556 730 aa32.46■■■□□ 2.79
CCDC47-204ENST00000582252 KDM5CP41229 1560 aa32.45■■■□□ 2.79
CCDC47-204ENST00000582252 RICTORQ6R327 1708 aa32.44■■■□□ 2.78
CCDC47-204ENST00000582252 ATP7AQ04656 1500 aa32.44■■■□□ 2.78
CCDC47-204ENST00000582252 ANKRD50Q9ULJ7 1429 aa32.4■■■□□ 2.78
CCDC47-204ENST00000582252 HECW2Q9P2P5 1572 aa32.38■■■□□ 2.77
CCDC47-204ENST00000582252 KIDINS220Q9ULH0 1771 aa32.38■■■□□ 2.77
CCDC47-204ENST00000582252 DUOX2Q9NRD8 1548 aa32.38■■■□□ 2.77
CCDC47-204ENST00000582252 MLH3Q9UHC1 1453 aa32.35■■■□□ 2.77
CCDC47-204ENST00000582252 SLC4A1APQ9BWU0 796 aaKnown RBP32.34■■■□□ 2.77
CCDC47-204ENST00000582252 PZPP20742 1482 aa32.34■■■□□ 2.77
CCDC47-204ENST00000582252 FRMPD1Q5SYB0 1578 aa32.32■■■□□ 2.76
CCDC47-204ENST00000582252 ANKRD30BQ9BXX2 1392 aa32.32■■■□□ 2.76
CCDC47-204ENST00000582252 ERBINQ96RT1 1412 aa32.3■■■□□ 2.76
CCDC47-204ENST00000582252 MIER1Q8N108 512 aa32.29■■■□□ 2.76
CCDC47-204ENST00000582252 RAPGEF3O95398 923 aa32.29■■■□□ 2.76
CCDC47-204ENST00000582252 TRHP20396 242 aaPredicted RBP32.29■■■□□ 2.76
CCDC47-204ENST00000582252 ZMYM4Q5VZL5 1548 aa32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms