RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 NLRP6P59044 892 aa16.88■□□□□ 0.29
CDH8-207ENST00000582242 PLSCR2Q9NRY7 297 aa16.87■□□□□ 0.29
CDH8-207ENST00000582242 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.84■□□□□ 0.29
CDH8-207ENST00000582242 WDR70Q9NW82 654 aa16.83■□□□□ 0.28
CDH8-207ENST00000582242 PCDH10Q9P2E7 1040 aa16.83■□□□□ 0.28
CDH8-207ENST00000582242 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.28
CDH8-207ENST00000582242 ILDR1Q86SU0 546 aaPredicted RBP16.82■□□□□ 0.28
CDH8-207ENST00000582242 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.82■□□□□ 0.28
CDH8-207ENST00000582242 PPP1R37O75864 691 aa16.8■□□□□ 0.28
CDH8-207ENST00000582242 L3MBTL3Q96JM7 780 aaPredicted RBP16.78■□□□□ 0.28
CDH8-207ENST00000582242 KCNV2Q8TDN2 545 aa16.75■□□□□ 0.27
CDH8-207ENST00000582242 ST18O60284 1047 aa16.74■□□□□ 0.27
CDH8-207ENST00000582242 C3orf67Q6ZVT6 689 aa16.72■□□□□ 0.27
CDH8-207ENST00000582242 MS4A4AQ96JQ5 239 aa16.68■□□□□ 0.26
CDH8-207ENST00000582242 DPY19L2Q6NUT2 758 aa16.67■□□□□ 0.26
CDH8-207ENST00000582242 SNPHO15079 494 aa16.66■□□□□ 0.26
CDH8-207ENST00000582242 TMEM121BQ9BXQ6 578 aaPredicted RBP16.6■□□□□ 0.25
CDH8-207ENST00000582242 ARHGEF1Q92888 912 aaKnown RBP16.59■□□□□ 0.25
CDH8-207ENST00000582242 BOLA1Q9Y3E2 137 aa16.59■□□□□ 0.25
CDH8-207ENST00000582242 E2F4Q16254 413 aa16.58■□□□□ 0.24
CDH8-207ENST00000582242 NCKAP5LQ9HCH0 1330 aa16.57■□□□□ 0.24
CDH8-207ENST00000582242 CDAN1Q8IWY9 1227 aa16.56■□□□□ 0.24
CDH8-207ENST00000582242 G3V3G9 751 aa16.55■□□□□ 0.24
CDH8-207ENST00000582242 PDE4AP27815 886 aa16.54■□□□□ 0.24
CDH8-207ENST00000582242 MFSD10Q14728 455 aa16.53■□□□□ 0.24
CDH8-207ENST00000582242 CRISPLD2Q9H0B8 497 aa16.53■□□□□ 0.24
CDH8-207ENST00000582242 NISCHQ9Y2I1 1504 aa16.53■□□□□ 0.24
CDH8-207ENST00000582242 LARP6Q9BRS8 491 aaKnown RBP16.49■□□□□ 0.23
CDH8-207ENST00000582242 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.48■□□□□ 0.23
CDH8-207ENST00000582242 LMOD2Q6P5Q4 547 aa16.47■□□□□ 0.23
CDH8-207ENST00000582242 MARVELD3Q96A59 401 aa16.44■□□□□ 0.22
CDH8-207ENST00000582242 DDX27Q96GQ7 796 aaKnown RBP16.44■□□□□ 0.22
CDH8-207ENST00000582242 TULP1O00294 542 aaPredicted RBP16.42■□□□□ 0.22
CDH8-207ENST00000582242 ARIH1Q9Y4X5 557 aaPredicted RBP16.41■□□□□ 0.22
CDH8-207ENST00000582242 TESPA1A2RU30 521 aaPredicted RBP16.38■□□□□ 0.21
CDH8-207ENST00000582242 CAMK2BQ13554 666 aa16.38■□□□□ 0.21
CDH8-207ENST00000582242 MICALL2Q8IY33 904 aa16.38■□□□□ 0.21
CDH8-207ENST00000582242 HOXB3P14651 431 aaPredicted RBP16.36■□□□□ 0.21
CDH8-207ENST00000582242 EMP3P54852 163 aa16.36■□□□□ 0.21
CDH8-207ENST00000582242 SEMA3EO15041 775 aa16.35■□□□□ 0.21
CDH8-207ENST00000582242 GPHNQ9NQX3 736 aaPredicted RBP16.31■□□□□ 0.2
CDH8-207ENST00000582242 TMEM92Q6UXU6 159 aa16.29■□□□□ 0.2
CDH8-207ENST00000582242 PPP1R15BQ5SWA1 713 aa16.28■□□□□ 0.2
CDH8-207ENST00000582242 DOK7Q18PE1 504 aa16.26■□□□□ 0.19
CDH8-207ENST00000582242 SMYD5Q6GMV2 418 aa16.24■□□□□ 0.19
CDH8-207ENST00000582242 ZNF710Q8N1W2 664 aa16.24■□□□□ 0.19
CDH8-207ENST00000582242 HS3ST6Q96QI5 342 aa16.24■□□□□ 0.19
CDH8-207ENST00000582242 POTEB3A0JP26 581 aa16.23■□□□□ 0.19
CDH8-207ENST00000582242 FAM205CA6NFA0 338 aa16.23■□□□□ 0.19
CDH8-207ENST00000582242 POTEBQ6S5H4 581 aa16.23■□□□□ 0.19
CDH8-207ENST00000582242 HOXB1P14653 301 aaPredicted RBP16.22■□□□□ 0.19
CDH8-207ENST00000582242 ZC3H15Q8WU90 426 aaKnown RBP16.22■□□□□ 0.19
CDH8-207ENST00000582242 DSG2Q14126 1118 aa16.17■□□□□ 0.18
CDH8-207ENST00000582242 RIMBP2O15034 1052 aa16.16■□□□□ 0.18
CDH8-207ENST00000582242 SPNS2Q8IVW8 549 aa16.16■□□□□ 0.18
CDH8-207ENST00000582242 TMC2Q8TDI7 906 aa16.16■□□□□ 0.18
CDH8-207ENST00000582242 FOXK1P85037 733 aa16.15■□□□□ 0.18
CDH8-207ENST00000582242 KRTAP3-3Q9BYR6 98 aa16.14■□□□□ 0.17
CDH8-207ENST00000582242 KRTAP3-2Q9BYR7 98 aa16.14■□□□□ 0.17
CDH8-207ENST00000582242 EMILIN3Q9NT22 766 aa16.13■□□□□ 0.17
CDH8-207ENST00000582242 ZSWIM6Q9HCJ5 1215 aa16.11■□□□□ 0.17
CDH8-207ENST00000582242 MMRN1Q13201 1228 aa16.1■□□□□ 0.17
CDH8-207ENST00000582242 DPYSL4O14531 572 aa16.09■□□□□ 0.17
CDH8-207ENST00000582242 SPDYE16A6NNV3 312 aaPredicted RBP16.08■□□□□ 0.16
CDH8-207ENST00000582242 KIF3CO14782 793 aa16.08■□□□□ 0.16
CDH8-207ENST00000582242 PDIA6Q15084 440 aa16.07■□□□□ 0.16
CDH8-207ENST00000582242 ERBB3P21860 1342 aa16.06■□□□□ 0.16
CDH8-207ENST00000582242 ZMYND10O75800 440 aa16.06■□□□□ 0.16
CDH8-207ENST00000582242 MLLT3P42568 568 aaPredicted RBP16.06■□□□□ 0.16
CDH8-207ENST00000582242 TMEM132AQ24JP5 1023 aa16.06■□□□□ 0.16
CDH8-207ENST00000582242 C2orf72A6NCS6 295 aa16.05■□□□□ 0.16
CDH8-207ENST00000582242 GPR153Q6NV75 609 aa16.04■□□□□ 0.16
CDH8-207ENST00000582242 PLPP6Q8IY26 295 aa16.04■□□□□ 0.16
CDH8-207ENST00000582242 SLC24A3Q9HC58 644 aa16.01■□□□□ 0.15
CDH8-207ENST00000582242 BRPF1P55201 1214 aaPredicted RBP16■□□□□ 0.15
CDH8-207ENST00000582242 VARS2Q5ST30 1063 aaKnown RBP15.99■□□□□ 0.15
CDH8-207ENST00000582242 RBM26Q5T8P6 1007 aaKnown RBP15.98■□□□□ 0.15
CDH8-207ENST00000582242 BARGINQ6ZT62 677 aa15.98■□□□□ 0.15
CDH8-207ENST00000582242 GPIHBP1Q8IV16 184 aa15.96■□□□□ 0.15
CDH8-207ENST00000582242 ARSIQ5FYB1 569 aa15.94■□□□□ 0.14
CDH8-207ENST00000582242 GTF3C3Q9Y5Q9 886 aa15.91■□□□□ 0.14
CDH8-207ENST00000582242 MAP3K9P80192 1104 aa15.89■□□□□ 0.13
CDH8-207ENST00000582242 ZNF687Q8N1G0 1237 aa15.88■□□□□ 0.13
CDH8-207ENST00000582242 KHSRPQ92945 711 aaKnown RBP eCLIP15.88■□□□□ 0.13
CDH8-207ENST00000582242 NEUROD2Q15784 382 aa15.87■□□□□ 0.13
CDH8-207ENST00000582242 OXER1Q8TDS5 423 aa15.86■□□□□ 0.13
CDH8-207ENST00000582242 ZNF316A6NFI3 1004 aaPredicted RBP15.83■□□□□ 0.12
CDH8-207ENST00000582242 UPF1Q92900 1129 aaKnown RBP eCLIP15.83■□□□□ 0.12
CDH8-207ENST00000582242 SLC34A2O95436 690 aa15.82■□□□□ 0.12
CDH8-207ENST00000582242 AK7Q96M32 723 aa15.82■□□□□ 0.12
CDH8-207ENST00000582242 GPR37O15354 613 aa15.8■□□□□ 0.12
CDH8-207ENST00000582242 PTGER2P43116 358 aa15.8■□□□□ 0.12
CDH8-207ENST00000582242 GRXCR2A6NFK2 248 aa15.78■□□□□ 0.12
CDH8-207ENST00000582242 KRI1Q8N9T8 703 aaKnown RBP15.77■□□□□ 0.12
CDH8-207ENST00000582242 PCDHGA4Q9Y5G9 962 aa15.77■□□□□ 0.12
CDH8-207ENST00000582242 TBC1D12O60347 775 aa15.76■□□□□ 0.11
CDH8-207ENST00000582242 NUDT7P0C024 238 aa15.76■□□□□ 0.11
CDH8-207ENST00000582242 OSBPP22059 807 aa15.74■□□□□ 0.11
CDH8-207ENST00000582242 TIMELESSQ9UNS1 1208 aa15.73■□□□□ 0.11
CDH8-207ENST00000582242 PTCD2Q8WV60 388 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms