RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 CFAP74Q9C0B2 1584 aa31.18■■■□□ 2.58
TOP3A-213ENST00000582230 PREX2Q70Z35 1606 aa31.16■■■□□ 2.58
TOP3A-213ENST00000582230 AKNAQ7Z591 1439 aa31.16■■■□□ 2.58
TOP3A-213ENST00000582230 CFDP1Q9UEE9 299 aaPredicted RBP31.16■■■□□ 2.58
TOP3A-213ENST00000582230 CDC42BPAQ5VT25 1732 aa31.13■■■□□ 2.57
TOP3A-213ENST00000582230 KDM6BO15054 1643 aa31.13■■■□□ 2.57
TOP3A-213ENST00000582230 CDC42BPBQ9Y5S2 1711 aa31.11■■■□□ 2.57
TOP3A-213ENST00000582230 COL17A1Q9UMD9 1497 aaPredicted RBP31.09■■■□□ 2.57
TOP3A-213ENST00000582230 ITSN2Q9NZM3 1697 aa31.08■■■□□ 2.57
TOP3A-213ENST00000582230 ZNF777Q9ULD5 760 aaPredicted RBP31.07■■■□□ 2.56
TOP3A-213ENST00000582230 ADGRL1O94910 1474 aa31.07■■■□□ 2.56
TOP3A-213ENST00000582230 MYOM3Q5VTT5 1437 aa31.05■■■□□ 2.56
TOP3A-213ENST00000582230 SCAPERQ9BY12 1400 aa31.05■■■□□ 2.56
TOP3A-213ENST00000582230 DENND4BO75064 1496 aaPredicted RBP31.04■■■□□ 2.56
TOP3A-213ENST00000582230 MIA2Q96PC5 1412 aa31.01■■■□□ 2.55
TOP3A-213ENST00000582230 PLEKHH2Q8IVE3 1493 aa31.01■■■□□ 2.55
TOP3A-213ENST00000582230 RAPGEF3O95398 923 aa31■■■□□ 2.55
TOP3A-213ENST00000582230 PPARGC1BQ86YN6 1023 aaKnown RBP31■■■□□ 2.55
TOP3A-213ENST00000582230 KIAA1107Q9UPP5 1409 aa30.98■■■□□ 2.55
TOP3A-213ENST00000582230 SAMD9LQ8IVG5 1584 aa30.97■■■□□ 2.55
TOP3A-213ENST00000582230 ABCC1P33527 1531 aa30.96■■■□□ 2.55
TOP3A-213ENST00000582230 ZNF644Q9H582 1327 aaPredicted RBP30.95■■■□□ 2.54
TOP3A-213ENST00000582230 POGZQ7Z3K3 1410 aa30.94■■■□□ 2.54
TOP3A-213ENST00000582230 ARHGEF12Q9NZN5 1544 aa30.92■■■□□ 2.54
TOP3A-213ENST00000582230 ZNF518AQ6AHZ1 1483 aa30.91■■■□□ 2.54
TOP3A-213ENST00000582230 HNRNPMP52272 730 aaKnown RBP eCLIP30.91■■■□□ 2.54
TOP3A-213ENST00000582230 FGD6Q6ZV73 1430 aa30.9■■■□□ 2.54
TOP3A-213ENST00000582230 CAMSAP2Q08AD1 1489 aa30.89■■■□□ 2.54
TOP3A-213ENST00000582230 SYCP2Q9BX26 1530 aa30.88■■■□□ 2.53
TOP3A-213ENST00000582230 FRMPD1Q5SYB0 1578 aa30.88■■■□□ 2.53
TOP3A-213ENST00000582230 AFAP1Q8N556 730 aa30.88■■■□□ 2.53
TOP3A-213ENST00000582230 RICTORQ6R327 1708 aa30.87■■■□□ 2.53
TOP3A-213ENST00000582230 RSPH4AQ5TD94 716 aa30.87■■■□□ 2.53
TOP3A-213ENST00000582230 TRAPPC8Q9Y2L5 1435 aa30.87■■■□□ 2.53
TOP3A-213ENST00000582230 MBD5Q9P267 1494 aa30.84■■■□□ 2.53
TOP3A-213ENST00000582230 ZMYM4Q5VZL5 1548 aa30.83■■■□□ 2.53
TOP3A-213ENST00000582230 MAGI2Q86UL8 1455 aa30.82■■■□□ 2.53
TOP3A-213ENST00000582230 KDM5CP41229 1560 aa30.81■■■□□ 2.52
TOP3A-213ENST00000582230 TCOF1Q13428 1488 aaKnown RBP30.81■■■□□ 2.52
TOP3A-213ENST00000582230 PTPN23Q9H3S7 1636 aa30.8■■■□□ 2.52
TOP3A-213ENST00000582230 MLH3Q9UHC1 1453 aa30.76■■■□□ 2.52
TOP3A-213ENST00000582230 CCDC141Q6ZP82 1450 aa30.76■■■□□ 2.51
TOP3A-213ENST00000582230 SPAG9O60271 1321 aaKnown RBP30.75■■■□□ 2.51
TOP3A-213ENST00000582230 ARHGEF5Q12774 1597 aa30.75■■■□□ 2.51
TOP3A-213ENST00000582230 MYT1LQ9UL68 1186 aa30.75■■■□□ 2.51
TOP3A-213ENST00000582230 FAM50AQ14320 339 aaKnown RBP30.73■■■□□ 2.51
TOP3A-213ENST00000582230 TSPY4P0CV99 314 aa30.72■■■□□ 2.51
TOP3A-213ENST00000582230 TSPY10P0CW01 314 aa30.72■■■□□ 2.51
TOP3A-213ENST00000582230 ZFYVE16Q7Z3T8 1539 aa30.72■■■□□ 2.51
TOP3A-213ENST00000582230 HECW2Q9P2P5 1572 aa30.71■■■□□ 2.51
TOP3A-213ENST00000582230 RTEL1-TNFRSF6BF6WH68 1400 aa30.69■■■□□ 2.5
TOP3A-213ENST00000582230 YEATS2Q9ULM3 1422 aa30.69■■■□□ 2.5
TOP3A-213ENST00000582230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.68■■■□□ 2.5
TOP3A-213ENST00000582230 ARHGEF40Q8TER5 1519 aa30.67■■■□□ 2.5
TOP3A-213ENST00000582230 RRBP1Q9P2E9 1410 aaKnown RBP30.66■■■□□ 2.5
TOP3A-213ENST00000582230 ABCC5O15440 1437 aa30.64■■■□□ 2.49
TOP3A-213ENST00000582230 DAPK1P53355 1430 aa30.64■■■□□ 2.49
TOP3A-213ENST00000582230 ATP10AO60312 1499 aa30.63■■■□□ 2.49
TOP3A-213ENST00000582230 ATP7AQ04656 1500 aa30.63■■■□□ 2.49
TOP3A-213ENST00000582230 INO80Q9ULG1 1556 aaPredicted RBP30.62■■■□□ 2.49
TOP3A-213ENST00000582230 DNMT1P26358 1616 aaKnown RBP30.61■■■□□ 2.49
TOP3A-213ENST00000582230 KIDINS220Q9ULH0 1771 aa30.61■■■□□ 2.49
TOP3A-213ENST00000582230 SHANK2Q9UPX8 1470 aa30.59■■■□□ 2.49
TOP3A-213ENST00000582230 C9orf84Q5VXU9 1444 aa30.59■■■□□ 2.49
TOP3A-213ENST00000582230 MAST1Q9Y2H9 1570 aa30.58■■■□□ 2.49
TOP3A-213ENST00000582230 DIP2CQ9Y2E4 1556 aa30.57■■■□□ 2.48
TOP3A-213ENST00000582230 ABCA6Q8N139 1617 aa30.55■■■□□ 2.48
TOP3A-213ENST00000582230 REREQ9P2R6 1566 aa30.52■■■□□ 2.48
TOP3A-213ENST00000582230 ARID4BQ4LE39 1312 aaPredicted RBP30.51■■■□□ 2.48
TOP3A-213ENST00000582230 CROCC2H7BZ55 1655 aa30.51■■■□□ 2.47
TOP3A-213ENST00000582230 A2MP01023 1474 aa30.49■■■□□ 2.47
TOP3A-213ENST00000582230 CHIC2Q9UKJ5 165 aa30.48■■■□□ 2.47
TOP3A-213ENST00000582230 ANKRD30AQ9BXX3 1397 aa30.47■■■□□ 2.47
TOP3A-213ENST00000582230 DHX29Q7Z478 1369 aaKnown RBP30.46■■■□□ 2.47
TOP3A-213ENST00000582230 ITGAEP38570 1179 aa30.46■■■□□ 2.47
TOP3A-213ENST00000582230 ADGBQ8N7X0 1667 aa30.45■■■□□ 2.46
TOP3A-213ENST00000582230 PLXNC1O60486 1568 aa30.45■■■□□ 2.46
TOP3A-213ENST00000582230 PTPRKQ15262 1439 aa30.44■■■□□ 2.46
TOP3A-213ENST00000582230 ADGRL2O95490 1459 aa30.44■■■□□ 2.46
TOP3A-213ENST00000582230 AGLP35573 1532 aa30.43■■■□□ 2.46
TOP3A-213ENST00000582230 NCOA1Q15788 1441 aa30.43■■■□□ 2.46
TOP3A-213ENST00000582230 RRP7BPQ9NSQ0 103 aa30.42■■■□□ 2.46
TOP3A-213ENST00000582230 KIF15Q9NS87 1388 aa30.41■■■□□ 2.46
TOP3A-213ENST00000582230 ROCK1Q13464 1354 aa30.4■■■□□ 2.46
TOP3A-213ENST00000582230 DUOX2Q9NRD8 1548 aa30.37■■■□□ 2.45
TOP3A-213ENST00000582230 SIGLEC1Q9BZZ2 1709 aa30.36■■■□□ 2.45
TOP3A-213ENST00000582230 MLECQ14165 292 aa30.32■■■□□ 2.44
TOP3A-213ENST00000582230 ERBINQ96RT1 1412 aa30.31■■■□□ 2.44
TOP3A-213ENST00000582230 KIF3BO15066 747 aa30.31■■■□□ 2.44
TOP3A-213ENST00000582230 BCORL1Q5H9F3 1711 aa30.3■■■□□ 2.44
TOP3A-213ENST00000582230 KDM4FA0A1W2PPD8 638 aa30.29■■■□□ 2.44
TOP3A-213ENST00000582230 PPP6R1Q9UPN7 881 aa30.26■■■□□ 2.43
TOP3A-213ENST00000582230 GGT6Q6P531 493 aa30.25■■■□□ 2.43
TOP3A-213ENST00000582230 ANKRD50Q9ULJ7 1429 aa30.24■■■□□ 2.43
TOP3A-213ENST00000582230 EIF2AK4Q9P2K8 1649 aaKnown RBP30.24■■■□□ 2.43
TOP3A-213ENST00000582230 ADAMTSL3P82987 1691 aa30.23■■■□□ 2.43
TOP3A-213ENST00000582230 ESF1Q9H501 851 aaKnown RBP30.21■■■□□ 2.43
TOP3A-213ENST00000582230 HFM1A2PYH4 1435 aa30.17■■■□□ 2.42
TOP3A-213ENST00000582230 NAIPQ13075 1403 aa30.15■■■□□ 2.42
TOP3A-213ENST00000582230 MADDQ8WXG6 1647 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms