RNA–Protein interactions for RNA: ENST00000581963.1

CDK12-207, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-207ENST00000581963 POGZQ7Z3K3 1410 aa10.39□□□□□ -0.75
CDK12-207ENST00000581963 LRRIQ1Q96JM4 1722 aa10.38□□□□□ -0.75
CDK12-207ENST00000581963 ARHGEF12Q9NZN5 1544 aa10.38□□□□□ -0.75
CDK12-207ENST00000581963 KIF14Q15058 1648 aa10.37□□□□□ -0.75
CDK12-207ENST00000581963 PLCH2O75038 1416 aa10.36□□□□□ -0.75
CDK12-207ENST00000581963 SCAPERQ9BY12 1400 aa10.36□□□□□ -0.75
CDK12-207ENST00000581963 STRCQ7RTU9 1775 aa10.36□□□□□ -0.75
CDK12-207ENST00000581963 PLPPR3Q6T4P5 718 aa10.35□□□□□ -0.75
CDK12-207ENST00000581963 SETD1BQ9UPS6 1966 aaKnown RBP10.35□□□□□ -0.75
CDK12-207ENST00000581963 CDC42BPBQ9Y5S2 1711 aa10.34□□□□□ -0.75
CDK12-207ENST00000581963 ATP10AO60312 1499 aa10.34□□□□□ -0.75
CDK12-207ENST00000581963 KDM5CP41229 1560 aa10.34□□□□□ -0.75
CDK12-207ENST00000581963 C9orf84Q5VXU9 1444 aa10.33□□□□□ -0.76
CDK12-207ENST00000581963 MLECQ14165 292 aa10.33□□□□□ -0.76
CDK12-207ENST00000581963 DIP2CQ9Y2E4 1556 aa10.32□□□□□ -0.76
CDK12-207ENST00000581963 ABCA6Q8N139 1617 aa10.32□□□□□ -0.76
CDK12-207ENST00000581963 C3P01024 1663 aa10.31□□□□□ -0.76
CDK12-207ENST00000581963 ARHGAP35Q9NRY4 1499 aa10.31□□□□□ -0.76
CDK12-207ENST00000581963 REREQ9P2R6 1566 aa10.31□□□□□ -0.76
CDK12-207ENST00000581963 ZNF518AQ6AHZ1 1483 aa10.3□□□□□ -0.76
CDK12-207ENST00000581963 CERKQ8TCT0 537 aa10.3□□□□□ -0.76
CDK12-207ENST00000581963 ITSN2Q9NZM3 1697 aa10.3□□□□□ -0.76
CDK12-207ENST00000581963 FMN1Q68DA7 1419 aa10.3□□□□□ -0.76
CDK12-207ENST00000581963 PREX2Q70Z35 1606 aa10.29□□□□□ -0.76
CDK12-207ENST00000581963 ARHGAP5Q13017 1502 aa10.29□□□□□ -0.76
CDK12-207ENST00000581963 CDC42BPAQ5VT25 1732 aa10.28□□□□□ -0.76
CDK12-207ENST00000581963 TROQ12816 1431 aaPredicted RBP10.28□□□□□ -0.76
CDK12-207ENST00000581963 CEBPAP49715 358 aaPredicted RBP10.28□□□□□ -0.76
CDK12-207ENST00000581963 EFCAB2Q5VUJ9 269 aa10.28□□□□□ -0.76
CDK12-207ENST00000581963 KIDINS220Q9ULH0 1771 aa10.27□□□□□ -0.77
CDK12-207ENST00000581963 ABCC1P33527 1531 aa10.27□□□□□ -0.77
CDK12-207ENST00000581963 UHRF1BP1Q6BDS2 1440 aa10.25□□□□□ -0.77
CDK12-207ENST00000581963 AFAP1Q8N556 730 aa10.25□□□□□ -0.77
CDK12-207ENST00000581963 ATP1B4Q9UN42 357 aaPredicted RBP10.25□□□□□ -0.77
CDK12-207ENST00000581963 CLIP1P30622 1438 aa10.24□□□□□ -0.77
CDK12-207ENST00000581963 MLH3Q9UHC1 1453 aa10.24□□□□□ -0.77
CDK12-207ENST00000581963 AGLP35573 1532 aa10.24□□□□□ -0.77
CDK12-207ENST00000581963 EHMT2Q96KQ7 1210 aa10.24□□□□□ -0.77
CDK12-207ENST00000581963 MROH2AA6NES4 1674 aa10.23□□□□□ -0.77
CDK12-207ENST00000581963 CDK11AQ9UQ88 783 aaPredicted RBP10.23□□□□□ -0.77
CDK12-207ENST00000581963 TRAPPC8Q9Y2L5 1435 aa10.23□□□□□ -0.77
CDK12-207ENST00000581963 UBTFP17480 764 aaKnown RBP10.22□□□□□ -0.77
CDK12-207ENST00000581963 LTBP4Q8N2S1 1624 aa10.22□□□□□ -0.77
CDK12-207ENST00000581963 PTPRTO14522 1441 aa10.21□□□□□ -0.78
CDK12-207ENST00000581963 SUPT6HQ7KZ85 1726 aaKnown RBP10.21□□□□□ -0.78
CDK12-207ENST00000581963 CCDC18Q5T9S5 1454 aa10.2□□□□□ -0.78
CDK12-207ENST00000581963 SPATA31D1Q6ZQQ2 1576 aa10.2□□□□□ -0.78
CDK12-207ENST00000581963 SAMD9LQ8IVG5 1584 aa10.2□□□□□ -0.78
CDK12-207ENST00000581963 DMRT2Q9Y5R5 561 aa10.2□□□□□ -0.78
CDK12-207ENST00000581963 ZNF142P52746 1687 aaPredicted RBP10.19□□□□□ -0.78
CDK12-207ENST00000581963 CASKIN1Q8WXD9 1431 aa10.19□□□□□ -0.78
CDK12-207ENST00000581963 CLTCQ00610 1675 aaKnown RBP10.18□□□□□ -0.78
CDK12-207ENST00000581963 NCOA1Q15788 1441 aa10.18□□□□□ -0.78
CDK12-207ENST00000581963 DISP3Q9P2K9 1392 aa10.18□□□□□ -0.78
CDK12-207ENST00000581963 ILDR2Q71H61 639 aa10.18□□□□□ -0.78
CDK12-207ENST00000581963 MYT1LQ9UL68 1186 aa10.18□□□□□ -0.78
CDK12-207ENST00000581963 SYCP2Q9BX26 1530 aa10.17□□□□□ -0.78
CDK12-207ENST00000581963 CAMSAP1Q5T5Y3 1602 aa10.17□□□□□ -0.78
CDK12-207ENST00000581963 MYO3AQ8NEV4 1616 aa10.17□□□□□ -0.78
CDK12-207ENST00000581963 INO80Q9ULG1 1556 aaPredicted RBP10.17□□□□□ -0.78
CDK12-207ENST00000581963 IQSEC2Q5JU85 1478 aa10.17□□□□□ -0.78
CDK12-207ENST00000581963 CNTLNQ9NXG0 1405 aa10.16□□□□□ -0.78
CDK12-207ENST00000581963 PLXNC1O60486 1568 aa10.16□□□□□ -0.78
CDK12-207ENST00000581963 FYCO1Q9BQS8 1478 aa10.16□□□□□ -0.78
CDK12-207ENST00000581963 ATP7AQ04656 1500 aa10.15□□□□□ -0.78
CDK12-207ENST00000581963 NPATQ14207 1427 aa10.15□□□□□ -0.79
CDK12-207ENST00000581963 ADGBQ8N7X0 1667 aa10.14□□□□□ -0.79
CDK12-207ENST00000581963 ESF1Q9H501 851 aaKnown RBP10.13□□□□□ -0.79
CDK12-207ENST00000581963 CEP170BQ9Y4F5 1589 aaPredicted RBP10.13□□□□□ -0.79
CDK12-207ENST00000581963 GPATCH8Q9UKJ3 1502 aaKnown RBP10.12□□□□□ -0.79
CDK12-207ENST00000581963 SOCS7O14512 581 aa10.12□□□□□ -0.79
CDK12-207ENST00000581963 ZMYM3Q14202 1370 aa10.11□□□□□ -0.79
CDK12-207ENST00000581963 POLR1AO95602 1720 aaPredicted RBP10.1□□□□□ -0.79
CDK12-207ENST00000581963 ZNF777Q9ULD5 760 aaPredicted RBP10.1□□□□□ -0.79
CDK12-207ENST00000581963 A2MP01023 1474 aa10.1□□□□□ -0.79
CDK12-207ENST00000581963 PLA2R1Q13018 1463 aa10.1□□□□□ -0.79
CDK12-207ENST00000581963 TCOF1Q13428 1488 aaKnown RBP10.1□□□□□ -0.79
CDK12-207ENST00000581963 SPAG9O60271 1321 aaKnown RBP10.09□□□□□ -0.79
CDK12-207ENST00000581963 PTPRKQ15262 1439 aa10.09□□□□□ -0.79
CDK12-207ENST00000581963 KIAA1107Q9UPP5 1409 aa10.09□□□□□ -0.79
CDK12-207ENST00000581963 PLEKHH2Q8IVE3 1493 aa10.09□□□□□ -0.79
CDK12-207ENST00000581963 TIAM1Q13009 1591 aa10.09□□□□□ -0.79
CDK12-207ENST00000581963 HNRNPMP52272 730 aaKnown RBP eCLIP10.08□□□□□ -0.8
CDK12-207ENST00000581963 ZNF335Q9H4Z2 1342 aaPredicted RBP10.07□□□□□ -0.8
CDK12-207ENST00000581963 NCKAP5LQ9HCH0 1330 aa10.07□□□□□ -0.8
CDK12-207ENST00000581963 DNMT1P26358 1616 aaKnown RBP10.07□□□□□ -0.8
CDK12-207ENST00000581963 NEURL4Q96JN8 1562 aa10.05□□□□□ -0.8
CDK12-207ENST00000581963 CCNB3Q8WWL7 1395 aa10.05□□□□□ -0.8
CDK12-207ENST00000581963 A2ML1A8K2U0 1454 aa10.04□□□□□ -0.8
CDK12-207ENST00000581963 MBD5Q9P267 1494 aa10.04□□□□□ -0.8
CDK12-207ENST00000581963 EHBP1L1Q8N3D4 1523 aa10.04□□□□□ -0.8
CDK12-207ENST00000581963 PKD2Q13563 968 aa10.04□□□□□ -0.8
CDK12-207ENST00000581963 CFDP1Q9UEE9 299 aaPredicted RBP10.04□□□□□ -0.8
CDK12-207ENST00000581963 UBAP1LF5GYI3 381 aa10.03□□□□□ -0.8
CDK12-207ENST00000581963 GGT6Q6P531 493 aa10.03□□□□□ -0.8
CDK12-207ENST00000581963 MTUS2Q5JR59 1369 aa10.02□□□□□ -0.8
CDK12-207ENST00000581963 ZNF644Q9H582 1327 aaPredicted RBP10.02□□□□□ -0.81
CDK12-207ENST00000581963 RTEL1-TNFRSF6BF6WH68 1400 aa10.01□□□□□ -0.81
CDK12-207ENST00000581963 KDM5DQ9BY66 1539 aa10.01□□□□□ -0.81
CDK12-207ENST00000581963 FAM135AQ9P2D6 1515 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms