RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 SCAPERQ9BY12 1400 aa16.38■□□□□ 0.21
PPP4R1-220ENST00000581835 CDC42BPAQ5VT25 1732 aa16.38■□□□□ 0.21
PPP4R1-220ENST00000581835 PREX2Q70Z35 1606 aa16.37■□□□□ 0.21
PPP4R1-220ENST00000581835 VPS8Q8N3P4 1428 aa16.36■□□□□ 0.21
PPP4R1-220ENST00000581835 MTUS2Q5JR59 1369 aa16.36■□□□□ 0.21
PPP4R1-220ENST00000581835 POGZQ7Z3K3 1410 aa16.35■□□□□ 0.21
PPP4R1-220ENST00000581835 ZMYM4Q5VZL5 1548 aa16.35■□□□□ 0.21
PPP4R1-220ENST00000581835 GPATCH8Q9UKJ3 1502 aaKnown RBP16.33■□□□□ 0.2
PPP4R1-220ENST00000581835 EHBP1L1Q8N3D4 1523 aa16.32■□□□□ 0.2
PPP4R1-220ENST00000581835 ARHGEF40Q8TER5 1519 aa16.31■□□□□ 0.2
PPP4R1-220ENST00000581835 MAGI2Q86UL8 1455 aa16.31■□□□□ 0.2
PPP4R1-220ENST00000581835 TIAM1Q13009 1591 aa16.3■□□□□ 0.2
PPP4R1-220ENST00000581835 ZFYVE16Q7Z3T8 1539 aa16.29■□□□□ 0.2
PPP4R1-220ENST00000581835 YEATS2Q9ULM3 1422 aa16.29■□□□□ 0.2
PPP4R1-220ENST00000581835 AFAP1Q8N556 730 aa16.29■□□□□ 0.2
PPP4R1-220ENST00000581835 ABCC1P33527 1531 aa16.29■□□□□ 0.2
PPP4R1-220ENST00000581835 ZNF518AQ6AHZ1 1483 aa16.29■□□□□ 0.2
PPP4R1-220ENST00000581835 CCNB3Q8WWL7 1395 aa16.28■□□□□ 0.2
PPP4R1-220ENST00000581835 ARHGEF12Q9NZN5 1544 aa16.28■□□□□ 0.2
PPP4R1-220ENST00000581835 ITSN2Q9NZM3 1697 aa16.27■□□□□ 0.2
PPP4R1-220ENST00000581835 KDM5CP41229 1560 aa16.27■□□□□ 0.2
PPP4R1-220ENST00000581835 SAMD9LQ8IVG5 1584 aa16.26■□□□□ 0.19
PPP4R1-220ENST00000581835 CFDP1Q9UEE9 299 aaPredicted RBP16.26■□□□□ 0.19
PPP4R1-220ENST00000581835 ZNF777Q9ULD5 760 aaPredicted RBP16.26■□□□□ 0.19
PPP4R1-220ENST00000581835 TRAPPC8Q9Y2L5 1435 aa16.26■□□□□ 0.19
PPP4R1-220ENST00000581835 BCORL1Q5H9F3 1711 aa16.25■□□□□ 0.19
PPP4R1-220ENST00000581835 SUPT6HQ7KZ85 1726 aaKnown RBP16.25■□□□□ 0.19
PPP4R1-220ENST00000581835 SIGLEC1Q9BZZ2 1709 aa16.25■□□□□ 0.19
PPP4R1-220ENST00000581835 MAP3K1Q13233 1512 aa16.24■□□□□ 0.19
PPP4R1-220ENST00000581835 ARID4BQ4LE39 1312 aaPredicted RBP16.24■□□□□ 0.19
PPP4R1-220ENST00000581835 ADAMTSL3P82987 1691 aa16.24■□□□□ 0.19
PPP4R1-220ENST00000581835 LRRC9Q6ZRR7 1453 aa16.23■□□□□ 0.19
PPP4R1-220ENST00000581835 HECW2Q9P2P5 1572 aa16.23■□□□□ 0.19
PPP4R1-220ENST00000581835 NCOA2Q15596 1464 aa16.22■□□□□ 0.19
PPP4R1-220ENST00000581835 MLH3Q9UHC1 1453 aa16.22■□□□□ 0.19
PPP4R1-220ENST00000581835 ATP10AO60312 1499 aa16.22■□□□□ 0.19
PPP4R1-220ENST00000581835 SYCP2Q9BX26 1530 aa16.21■□□□□ 0.19
PPP4R1-220ENST00000581835 HNRNPMP52272 730 aaKnown RBP eCLIP16.21■□□□□ 0.194e-6■■■■□ 23.6
PPP4R1-220ENST00000581835 KANK4Q5T7N3 995 aaPredicted RBP16.21■□□□□ 0.19
PPP4R1-220ENST00000581835 PLEKHH2Q8IVE3 1493 aa16.21■□□□□ 0.19
PPP4R1-220ENST00000581835 KIAA1107Q9UPP5 1409 aa16.2■□□□□ 0.18
PPP4R1-220ENST00000581835 MYT1LQ9UL68 1186 aa16.2■□□□□ 0.18
PPP4R1-220ENST00000581835 C9orf84Q5VXU9 1444 aa16.19■□□□□ 0.18
PPP4R1-220ENST00000581835 ZNF644Q9H582 1327 aaPredicted RBP16.19■□□□□ 0.18
PPP4R1-220ENST00000581835 KIDINS220Q9ULH0 1771 aa16.18■□□□□ 0.18
PPP4R1-220ENST00000581835 DIP2CQ9Y2E4 1556 aa16.18■□□□□ 0.18
PPP4R1-220ENST00000581835 ABCA6Q8N139 1617 aa16.18■□□□□ 0.18
PPP4R1-220ENST00000581835 MADDQ8WXG6 1647 aa16.18■□□□□ 0.18
PPP4R1-220ENST00000581835 PTPRMP28827 1452 aa16.16■□□□□ 0.18
PPP4R1-220ENST00000581835 APLP2Q06481 763 aa16.15■□□□□ 0.18
PPP4R1-220ENST00000581835 REREQ9P2R6 1566 aa16.15■□□□□ 0.18
PPP4R1-220ENST00000581835 MBD5Q9P267 1494 aa16.15■□□□□ 0.18
PPP4R1-220ENST00000581835 MLECQ14165 292 aa16.14■□□□□ 0.17
PPP4R1-220ENST00000581835 SPAG9O60271 1321 aaKnown RBP16.14■□□□□ 0.17
PPP4R1-220ENST00000581835 RIMS1Q86UR5 1692 aaKnown RBP16.13■□□□□ 0.17
PPP4R1-220ENST00000581835 CAMSAP2Q08AD1 1489 aa16.12■□□□□ 0.17
PPP4R1-220ENST00000581835 FER1L4A9Z1Z3 1794 aa16.11■□□□□ 0.17
PPP4R1-220ENST00000581835 ATP7AQ04656 1500 aa16.11■□□□□ 0.17
PPP4R1-220ENST00000581835 INO80Q9ULG1 1556 aaPredicted RBP16.11■□□□□ 0.17
PPP4R1-220ENST00000581835 AGLP35573 1532 aa16.09■□□□□ 0.17
PPP4R1-220ENST00000581835 MYOM3Q5VTT5 1437 aa16.09■□□□□ 0.17
PPP4R1-220ENST00000581835 RSPH4AQ5TD94 716 aa16.08■□□□□ 0.16
PPP4R1-220ENST00000581835 MIA2Q96PC5 1412 aa16.07■□□□□ 0.16
PPP4R1-220ENST00000581835 CCDC141Q6ZP82 1450 aa16.07■□□□□ 0.16
PPP4R1-220ENST00000581835 ARHGEF5Q12774 1597 aa16.06■□□□□ 0.16
PPP4R1-220ENST00000581835 RTEL1-TNFRSF6BF6WH68 1400 aa16.06■□□□□ 0.16
PPP4R1-220ENST00000581835 A2MP01023 1474 aa16.04■□□□□ 0.16
PPP4R1-220ENST00000581835 ADGBQ8N7X0 1667 aa16.04■□□□□ 0.16
PPP4R1-220ENST00000581835 PLXNC1O60486 1568 aa16.04■□□□□ 0.16
PPP4R1-220ENST00000581835 PLPPR3Q6T4P5 718 aa16.01■□□□□ 0.15
PPP4R1-220ENST00000581835 TSPY4P0CV99 314 aa16■□□□□ 0.15
PPP4R1-220ENST00000581835 TSPY10P0CW01 314 aa16■□□□□ 0.15
PPP4R1-220ENST00000581835 PTPN23Q9H3S7 1636 aa15.99■□□□□ 0.15
PPP4R1-220ENST00000581835 DHX29Q7Z478 1369 aaKnown RBP15.99■□□□□ 0.15
PPP4R1-220ENST00000581835 SETD1BQ9UPS6 1966 aaKnown RBP15.98■□□□□ 0.15
PPP4R1-220ENST00000581835 CEBPAP49715 358 aaPredicted RBP15.98■□□□□ 0.15
PPP4R1-220ENST00000581835 MAST1Q9Y2H9 1570 aa15.97■□□□□ 0.15
PPP4R1-220ENST00000581835 FGD6Q6ZV73 1430 aa15.97■□□□□ 0.15
PPP4R1-220ENST00000581835 ESF1Q9H501 851 aaKnown RBP15.97■□□□□ 0.15
PPP4R1-220ENST00000581835 C3P01024 1663 aa15.96■□□□□ 0.15
PPP4R1-220ENST00000581835 TCOF1Q13428 1488 aaKnown RBP15.96■□□□□ 0.14
PPP4R1-220ENST00000581835 LMTK3Q96Q04 1460 aa15.96■□□□□ 0.14
PPP4R1-220ENST00000581835 CNTLNQ9NXG0 1405 aa15.95■□□□□ 0.14
PPP4R1-220ENST00000581835 GGT6Q6P531 493 aa15.95■□□□□ 0.14
PPP4R1-220ENST00000581835 MROH2AA6NES4 1674 aa15.93■□□□□ 0.14
PPP4R1-220ENST00000581835 CROCC2H7BZ55 1655 aa15.93■□□□□ 0.14
PPP4R1-220ENST00000581835 ABCC5O15440 1437 aa15.93■□□□□ 0.14
PPP4R1-220ENST00000581835 CLTCQ00610 1675 aaKnown RBP15.92■□□□□ 0.14
PPP4R1-220ENST00000581835 KIF3BO15066 747 aa15.92■□□□□ 0.14
PPP4R1-220ENST00000581835 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
PPP4R1-220ENST00000581835 DNMT1P26358 1616 aaKnown RBP15.91■□□□□ 0.14
PPP4R1-220ENST00000581835 PREX1Q8TCU6 1659 aa15.91■□□□□ 0.14
PPP4R1-220ENST00000581835 SHANK2Q9UPX8 1470 aa15.91■□□□□ 0.14
PPP4R1-220ENST00000581835 ZMYM3Q14202 1370 aa15.9■□□□□ 0.14
PPP4R1-220ENST00000581835 DAPK1P53355 1430 aa15.9■□□□□ 0.14
PPP4R1-220ENST00000581835 HSPA2P54652 639 aa15.87■□□□□ 0.13
PPP4R1-220ENST00000581835 DUOX2Q9NRD8 1548 aa15.86■□□□□ 0.13
PPP4R1-220ENST00000581835 FAM50AQ14320 339 aaKnown RBP15.86■□□□□ 0.13
PPP4R1-220ENST00000581835 PPARGC1BQ86YN6 1023 aaKnown RBP15.86■□□□□ 0.13
PPP4R1-220ENST00000581835 EIF2AK4Q9P2K8 1649 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms