RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 PREX2Q70Z35 1606 aa20.25■□□□□ 0.83
CBX1-206ENST00000581003 ARHGEF40Q8TER5 1519 aa20.25■□□□□ 0.83
CBX1-206ENST00000581003 POGZQ7Z3K3 1410 aa20.24■□□□□ 0.83
CBX1-206ENST00000581003 YEATS2Q9ULM3 1422 aa20.23■□□□□ 0.83
CBX1-206ENST00000581003 ZMYM4Q5VZL5 1548 aa20.22■□□□□ 0.83
CBX1-206ENST00000581003 SIGLEC1Q9BZZ2 1709 aa20.22■□□□□ 0.83
CBX1-206ENST00000581003 CDC42BPAQ5VT25 1732 aa20.22■□□□□ 0.83
CBX1-206ENST00000581003 EFCAB2Q5VUJ9 269 aa20.2■□□□□ 0.82
CBX1-206ENST00000581003 ZFYVE16Q7Z3T8 1539 aa20.18■□□□□ 0.82
CBX1-206ENST00000581003 ARHGEF12Q9NZN5 1544 aa20.18■□□□□ 0.82
CBX1-206ENST00000581003 ABCC1P33527 1531 aa20.17■□□□□ 0.82
CBX1-206ENST00000581003 MTUS2Q5JR59 1369 aa20.16■□□□□ 0.82
CBX1-206ENST00000581003 VPS8Q8N3P4 1428 aa20.16■□□□□ 0.82
CBX1-206ENST00000581003 GPATCH8Q9UKJ3 1502 aaKnown RBP20.16■□□□□ 0.82
CBX1-206ENST00000581003 SAMD9LQ8IVG5 1584 aa20.14■□□□□ 0.81
CBX1-206ENST00000581003 EHBP1L1Q8N3D4 1523 aa20.14■□□□□ 0.81
CBX1-206ENST00000581003 TRAPPC8Q9Y2L5 1435 aa20.14■□□□□ 0.81
CBX1-206ENST00000581003 AFAP1Q8N556 730 aa20.14■□□□□ 0.81
CBX1-206ENST00000581003 ITSN2Q9NZM3 1697 aa20.13■□□□□ 0.81
CBX1-206ENST00000581003 KDM5CP41229 1560 aa20.12■□□□□ 0.81
CBX1-206ENST00000581003 TIAM1Q13009 1591 aa20.12■□□□□ 0.81
CBX1-206ENST00000581003 BCORL1Q5H9F3 1711 aa20.12■□□□□ 0.81
CBX1-206ENST00000581003 ADAMTSL3P82987 1691 aa20.12■□□□□ 0.81
CBX1-206ENST00000581003 ZNF518AQ6AHZ1 1483 aa20.11■□□□□ 0.81
CBX1-206ENST00000581003 MADDQ8WXG6 1647 aa20.1■□□□□ 0.81
CBX1-206ENST00000581003 ARID4BQ4LE39 1312 aaPredicted RBP20.1■□□□□ 0.81
CBX1-206ENST00000581003 ZNF777Q9ULD5 760 aaPredicted RBP20.1■□□□□ 0.81
CBX1-206ENST00000581003 MAGI2Q86UL8 1455 aa20.1■□□□□ 0.81
CBX1-206ENST00000581003 SYCP2Q9BX26 1530 aa20.09■□□□□ 0.81
CBX1-206ENST00000581003 HECW2Q9P2P5 1572 aa20.08■□□□□ 0.81
CBX1-206ENST00000581003 CCNB3Q8WWL7 1395 aa20.08■□□□□ 0.8
CBX1-206ENST00000581003 ABCA6Q8N139 1617 aa20.07■□□□□ 0.8
CBX1-206ENST00000581003 DIP2CQ9Y2E4 1556 aa20.07■□□□□ 0.8
CBX1-206ENST00000581003 NCOA2Q15596 1464 aa20.05■□□□□ 0.8
CBX1-206ENST00000581003 ZNF644Q9H582 1327 aaPredicted RBP20.04■□□□□ 0.8
CBX1-206ENST00000581003 ATP10AO60312 1499 aa20.04■□□□□ 0.8
CBX1-206ENST00000581003 HNRNPMP52272 730 aaKnown RBP eCLIP20.03■□□□□ 0.8
CBX1-206ENST00000581003 CFDP1Q9UEE9 299 aaPredicted RBP20.03■□□□□ 0.8
CBX1-206ENST00000581003 PTPRMP28827 1452 aa20.03■□□□□ 0.8
CBX1-206ENST00000581003 C9orf84Q5VXU9 1444 aa20.02■□□□□ 0.8
CBX1-206ENST00000581003 MLECQ14165 292 aa20.02■□□□□ 0.8
CBX1-206ENST00000581003 KANK4Q5T7N3 995 aaPredicted RBP20.02■□□□□ 0.8
CBX1-206ENST00000581003 LRRC9Q6ZRR7 1453 aa20.02■□□□□ 0.8
CBX1-206ENST00000581003 RIMS1Q86UR5 1692 aaKnown RBP20.02■□□□□ 0.8
CBX1-206ENST00000581003 MLH3Q9UHC1 1453 aa20.01■□□□□ 0.79
CBX1-206ENST00000581003 SUPT6HQ7KZ85 1726 aaKnown RBP20.01■□□□□ 0.79
CBX1-206ENST00000581003 KIDINS220Q9ULH0 1771 aa20■□□□□ 0.79
CBX1-206ENST00000581003 MYT1LQ9UL68 1186 aa20■□□□□ 0.79
CBX1-206ENST00000581003 INO80Q9ULG1 1556 aaPredicted RBP19.95■□□□□ 0.78
CBX1-206ENST00000581003 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
CBX1-206ENST00000581003 KIAA1107Q9UPP5 1409 aa19.94■□□□□ 0.78
CBX1-206ENST00000581003 MBD5Q9P267 1494 aa19.94■□□□□ 0.78
CBX1-206ENST00000581003 FER1L4A9Z1Z3 1794 aa19.94■□□□□ 0.78
CBX1-206ENST00000581003 CAMSAP2Q08AD1 1489 aa19.93■□□□□ 0.78
CBX1-206ENST00000581003 PLEKHH2Q8IVE3 1493 aa19.93■□□□□ 0.78
CBX1-206ENST00000581003 ATP7AQ04656 1500 aa19.93■□□□□ 0.78
CBX1-206ENST00000581003 MAP3K1Q13233 1512 aa19.93■□□□□ 0.78
CBX1-206ENST00000581003 REREQ9P2R6 1566 aa19.93■□□□□ 0.78
CBX1-206ENST00000581003 SPAG9O60271 1321 aaKnown RBP19.91■□□□□ 0.78
CBX1-206ENST00000581003 AGLP35573 1532 aa19.86■□□□□ 0.77
CBX1-206ENST00000581003 PLXNC1O60486 1568 aa19.86■□□□□ 0.77
CBX1-206ENST00000581003 CEBPAP49715 358 aaPredicted RBP19.84■□□□□ 0.77
CBX1-206ENST00000581003 CCDC141Q6ZP82 1450 aa19.84■□□□□ 0.77
CBX1-206ENST00000581003 LMTK3Q96Q04 1460 aa19.83■□□□□ 0.76
CBX1-206ENST00000581003 MYOM3Q5VTT5 1437 aa19.83■□□□□ 0.76
CBX1-206ENST00000581003 A2MP01023 1474 aa19.82■□□□□ 0.76
CBX1-206ENST00000581003 ADGBQ8N7X0 1667 aa19.81■□□□□ 0.76
CBX1-206ENST00000581003 ARHGEF5Q12774 1597 aa19.79■□□□□ 0.76
CBX1-206ENST00000581003 APLP2Q06481 763 aa19.77■□□□□ 0.76
CBX1-206ENST00000581003 C3P01024 1663 aa19.76■□□□□ 0.75
CBX1-206ENST00000581003 RTEL1-TNFRSF6BF6WH68 1400 aa19.76■□□□□ 0.75
CBX1-206ENST00000581003 MIA2Q96PC5 1412 aa19.75■□□□□ 0.75
CBX1-206ENST00000581003 HSPA2P54652 639 aa19.74■□□□□ 0.75
CBX1-206ENST00000581003 PTPN23Q9H3S7 1636 aa19.73■□□□□ 0.75
CBX1-206ENST00000581003 CLTCQ00610 1675 aaKnown RBP19.72■□□□□ 0.75
CBX1-206ENST00000581003 MAST1Q9Y2H9 1570 aa19.7■□□□□ 0.74
CBX1-206ENST00000581003 FGD6Q6ZV73 1430 aa19.7■□□□□ 0.74
CBX1-206ENST00000581003 GGT6Q6P531 493 aa19.7■□□□□ 0.74
CBX1-206ENST00000581003 DHX29Q7Z478 1369 aaKnown RBP19.7■□□□□ 0.74
CBX1-206ENST00000581003 PREX1Q8TCU6 1659 aa19.68■□□□□ 0.74
CBX1-206ENST00000581003 CROCC2H7BZ55 1655 aa19.68■□□□□ 0.74
CBX1-206ENST00000581003 ABCC5O15440 1437 aa19.67■□□□□ 0.74
CBX1-206ENST00000581003 TCOF1Q13428 1488 aaKnown RBP19.67■□□□□ 0.74
CBX1-206ENST00000581003 MROH2AA6NES4 1674 aa19.66■□□□□ 0.74
CBX1-206ENST00000581003 PPARGC1BQ86YN6 1023 aaKnown RBP19.66■□□□□ 0.74
CBX1-206ENST00000581003 ESF1Q9H501 851 aaKnown RBP19.66■□□□□ 0.74
CBX1-206ENST00000581003 CNTLNQ9NXG0 1405 aa19.66■□□□□ 0.74
CBX1-206ENST00000581003 RSPH4AQ5TD94 716 aa19.65■□□□□ 0.74
CBX1-206ENST00000581003 KIF3BO15066 747 aa19.64■□□□□ 0.73
CBX1-206ENST00000581003 TSPY4P0CV99 314 aa19.64■□□□□ 0.73
CBX1-206ENST00000581003 TSPY10P0CW01 314 aa19.64■□□□□ 0.73
CBX1-206ENST00000581003 DNMT1P26358 1616 aaKnown RBP19.63■□□□□ 0.73
CBX1-206ENST00000581003 DAPK1P53355 1430 aa19.63■□□□□ 0.73
CBX1-206ENST00000581003 ZMYM3Q14202 1370 aa19.63■□□□□ 0.73
CBX1-206ENST00000581003 SHANK2Q9UPX8 1470 aa19.6■□□□□ 0.73
CBX1-206ENST00000581003 UHRF1BP1Q6BDS2 1440 aa19.6■□□□□ 0.73
CBX1-206ENST00000581003 PTPRKQ15262 1439 aa19.59■□□□□ 0.73
CBX1-206ENST00000581003 MROH1Q8NDA8 1641 aa19.58■□□□□ 0.73
CBX1-206ENST00000581003 KDM5DQ9BY66 1539 aa19.58■□□□□ 0.73
CBX1-206ENST00000581003 RNF17Q9BXT8 1623 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms