RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 EFCAB2Q5VUJ9 269 aa34.19■■■■□ 3.06
SNX11-207ENST00000580875 TROQ12816 1431 aaPredicted RBP34.18■■■■□ 3.06
SNX11-207ENST00000580875 MYO5CQ9NQX4 1742 aa34.18■■■■□ 3.06
SNX11-207ENST00000580875 KIF14Q15058 1648 aa34.17■■■■□ 3.06
SNX11-207ENST00000580875 RIMS1Q86UR5 1692 aaKnown RBP34.15■■■■□ 3.06
SNX11-207ENST00000580875 CLIP1P30622 1438 aa34.14■■■■□ 3.06
SNX11-207ENST00000580875 PCF11O94913 1555 aaKnown RBP34.13■■■■□ 3.05
SNX11-207ENST00000580875 SIGLEC1Q9BZZ2 1709 aa34.12■■■■□ 3.05
SNX11-207ENST00000580875 LMTK3Q96Q04 1460 aa34.09■■■■□ 3.05
SNX11-207ENST00000580875 LRRIQ1Q96JM4 1722 aa34.07■■■■□ 3.05
SNX11-207ENST00000580875 ARHGAP5Q13017 1502 aa34.07■■■■□ 3.04
SNX11-207ENST00000580875 ATP10AO60312 1499 aa34.06■■■■□ 3.04
SNX11-207ENST00000580875 CASKIN1Q8WXD9 1431 aa34.04■■■■□ 3.04
SNX11-207ENST00000580875 ZNF518AQ6AHZ1 1483 aa34.04■■■■□ 3.04
SNX11-207ENST00000580875 MLECQ14165 292 aa34.04■■■■□ 3.04
SNX11-207ENST00000580875 C9orf84Q5VXU9 1444 aa34.04■■■■□ 3.04
SNX11-207ENST00000580875 CCDC18Q5T9S5 1454 aa34.02■■■■□ 3.04
SNX11-207ENST00000580875 PLPPR3Q6T4P5 718 aa34■■■■□ 3.03
SNX11-207ENST00000580875 AFAP1Q8N556 730 aa33.97■■■■□ 3.03
SNX11-207ENST00000580875 KDM5CP41229 1560 aa33.97■■■■□ 3.03
SNX11-207ENST00000580875 FER1L4A9Z1Z3 1794 aa33.96■■■■□ 3.03
SNX11-207ENST00000580875 ARHGEF12Q9NZN5 1544 aa33.94■■■■□ 3.02
SNX11-207ENST00000580875 CDC42BPBQ9Y5S2 1711 aa33.92■■■■□ 3.02
SNX11-207ENST00000580875 FYCO1Q9BQS8 1478 aa33.9■■■■□ 3.02
SNX11-207ENST00000580875 PREX2Q70Z35 1606 aa33.9■■■■□ 3.02
SNX11-207ENST00000580875 HSPA2P54652 639 aa33.89■■■■□ 3.02
SNX11-207ENST00000580875 MYT1LQ9UL68 1186 aa33.89■■■■□ 3.02
SNX11-207ENST00000580875 FBXO41Q8TF61 875 aa33.87■■■■□ 3.01
SNX11-207ENST00000580875 ABCC1P33527 1531 aa33.85■■■■□ 3.01
SNX11-207ENST00000580875 MLH3Q9UHC1 1453 aa33.84■■■■□ 3.01
SNX11-207ENST00000580875 DIP2CQ9Y2E4 1556 aa33.84■■■■□ 3.01
SNX11-207ENST00000580875 REREQ9P2R6 1566 aa33.81■■■■□ 3
SNX11-207ENST00000580875 TRAPPC8Q9Y2L5 1435 aa33.81■■■■□ 3
SNX11-207ENST00000580875 ABCA6Q8N139 1617 aa33.78■■■■□ 3
SNX11-207ENST00000580875 ITSN2Q9NZM3 1697 aa33.77■■■■□ 3
SNX11-207ENST00000580875 CDC42BPAQ5VT25 1732 aa33.76■■■■□ 3
SNX11-207ENST00000580875 CEBPAP49715 358 aaPredicted RBP33.75■■■□□ 2.99
SNX11-207ENST00000580875 AGLP35573 1532 aa33.71■■■□□ 2.99
SNX11-207ENST00000580875 PREX1Q8TCU6 1659 aa33.71■■■□□ 2.99
SNX11-207ENST00000580875 GPATCH8Q9UKJ3 1502 aaKnown RBP33.69■■■□□ 2.98
SNX11-207ENST00000580875 ZNF777Q9ULD5 760 aaPredicted RBP33.68■■■□□ 2.98
SNX11-207ENST00000580875 KIDINS220Q9ULH0 1771 aa33.66■■■□□ 2.98
SNX11-207ENST00000580875 SAMD9LQ8IVG5 1584 aa33.65■■■□□ 2.98
SNX11-207ENST00000580875 ESF1Q9H501 851 aaKnown RBP33.63■■■□□ 2.97
SNX11-207ENST00000580875 UHRF1BP1Q6BDS2 1440 aa33.62■■■□□ 2.97
SNX11-207ENST00000580875 SYCP2Q9BX26 1530 aa33.62■■■□□ 2.97
SNX11-207ENST00000580875 CFDP1Q9UEE9 299 aaPredicted RBP33.58■■■□□ 2.97
SNX11-207ENST00000580875 MTUS2Q5JR59 1369 aa33.58■■■□□ 2.97
SNX11-207ENST00000580875 CCNB3Q8WWL7 1395 aa33.58■■■□□ 2.97
SNX11-207ENST00000580875 SPAG9O60271 1321 aaKnown RBP33.57■■■□□ 2.97
SNX11-207ENST00000580875 KIAA1107Q9UPP5 1409 aa33.57■■■□□ 2.96
SNX11-207ENST00000580875 HNRNPMP52272 730 aaKnown RBP eCLIP33.57■■■□□ 2.96
SNX11-207ENST00000580875 PLEKHH2Q8IVE3 1493 aa33.56■■■□□ 2.96
SNX11-207ENST00000580875 C3P01024 1663 aa33.56■■■□□ 2.96
SNX11-207ENST00000580875 CNTLNQ9NXG0 1405 aa33.54■■■□□ 2.96
SNX11-207ENST00000580875 SETD1BQ9UPS6 1966 aaKnown RBP33.54■■■□□ 2.96
SNX11-207ENST00000580875 CERKQ8TCT0 537 aa33.51■■■□□ 2.95
SNX11-207ENST00000580875 DMRT2Q9Y5R5 561 aa33.51■■■□□ 2.95
SNX11-207ENST00000580875 ATP7AQ04656 1500 aa33.49■■■□□ 2.95
SNX11-207ENST00000580875 STRCQ7RTU9 1775 aa33.47■■■□□ 2.95
SNX11-207ENST00000580875 INO80Q9ULG1 1556 aaPredicted RBP33.46■■■□□ 2.95
SNX11-207ENST00000580875 EHBP1L1Q8N3D4 1523 aa33.44■■■□□ 2.94
SNX11-207ENST00000580875 CEP162Q5TB80 1403 aa33.44■■■□□ 2.94
SNX11-207ENST00000580875 TIAM1Q13009 1591 aa33.42■■■□□ 2.94
SNX11-207ENST00000580875 A2MP01023 1474 aa33.41■■■□□ 2.94
SNX11-207ENST00000580875 PLXNC1O60486 1568 aa33.41■■■□□ 2.94
SNX11-207ENST00000580875 SUPT6HQ7KZ85 1726 aaKnown RBP33.41■■■□□ 2.94
SNX11-207ENST00000580875 MROH2AA6NES4 1674 aa33.39■■■□□ 2.94
SNX11-207ENST00000580875 NPATQ14207 1427 aa33.38■■■□□ 2.93
SNX11-207ENST00000580875 ZMYM3Q14202 1370 aa33.38■■■□□ 2.93
SNX11-207ENST00000580875 ZNF644Q9H582 1327 aaPredicted RBP33.37■■■□□ 2.93
SNX11-207ENST00000580875 PTPRTO14522 1441 aa33.35■■■□□ 2.93
SNX11-207ENST00000580875 MBD5Q9P267 1494 aa33.34■■■□□ 2.93
SNX11-207ENST00000580875 ADGBQ8N7X0 1667 aa33.29■■■□□ 2.92
SNX11-207ENST00000580875 GGT6Q6P531 493 aa33.29■■■□□ 2.92
SNX11-207ENST00000580875 NCOA1Q15788 1441 aa33.28■■■□□ 2.92
SNX11-207ENST00000580875 CLTCQ00610 1675 aaKnown RBP33.28■■■□□ 2.92
SNX11-207ENST00000580875 RTEL1-TNFRSF6BF6WH68 1400 aa33.27■■■□□ 2.92
SNX11-207ENST00000580875 PPP6R1Q9UPN7 881 aa33.26■■■□□ 2.91
SNX11-207ENST00000580875 NCOA2Q15596 1464 aa33.24■■■□□ 2.91
SNX11-207ENST00000580875 CAMSAP1Q5T5Y3 1602 aa33.22■■■□□ 2.91
SNX11-207ENST00000580875 PTPRKQ15262 1439 aa33.21■■■□□ 2.91
SNX11-207ENST00000580875 DHX29Q7Z478 1369 aaKnown RBP33.2■■■□□ 2.9
SNX11-207ENST00000580875 CCDC141Q6ZP82 1450 aa33.18■■■□□ 2.9
SNX11-207ENST00000580875 CAMSAP2Q08AD1 1489 aa33.18■■■□□ 2.9
SNX11-207ENST00000580875 MYO3AQ8NEV4 1616 aa33.17■■■□□ 2.9
SNX11-207ENST00000580875 RSPH4AQ5TD94 716 aa33.16■■■□□ 2.9
SNX11-207ENST00000580875 ZNF142P52746 1687 aaPredicted RBP33.13■■■□□ 2.89
SNX11-207ENST00000580875 LTBP4Q8N2S1 1624 aa33.13■■■□□ 2.89
SNX11-207ENST00000580875 CEP170BQ9Y4F5 1589 aaPredicted RBP33.12■■■□□ 2.89
SNX11-207ENST00000580875 VPS8Q8N3P4 1428 aa33.11■■■□□ 2.89
SNX11-207ENST00000580875 PLA2R1Q13018 1463 aa33.1■■■□□ 2.89
SNX11-207ENST00000580875 NCKAP5LQ9HCH0 1330 aa33.09■■■□□ 2.89
SNX11-207ENST00000580875 KIF3BO15066 747 aa33.08■■■□□ 2.89
SNX11-207ENST00000580875 PKD2Q13563 968 aa33.07■■■□□ 2.88
SNX11-207ENST00000580875 LRRC9Q6ZRR7 1453 aa33.06■■■□□ 2.88
SNX11-207ENST00000580875 LOC105371045A0A1W2PR82 267 aa33.06■■■□□ 2.88
SNX11-207ENST00000580875 ARHGEF5Q12774 1597 aa33.05■■■□□ 2.88
SNX11-207ENST00000580875 IQSEC2Q5JU85 1478 aa33.04■■■□□ 2.88
SNX11-207ENST00000580875 FAM135AQ9P2D6 1515 aa33.03■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms