RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 POGZQ7Z3K3 1410 aa42.88■■■■■ 4.45
LINC00271-207ENST00000580741 CDC42BPBQ9Y5S2 1711 aa42.85■■■■■ 4.45
LINC00271-207ENST00000580741 PREX2Q70Z35 1606 aa42.85■■■■■ 4.45
LINC00271-207ENST00000580741 ZMYM4Q5VZL5 1548 aa42.84■■■■■ 4.45
LINC00271-207ENST00000580741 ARHGEF40Q8TER5 1519 aa42.83■■■■■ 4.45
LINC00271-207ENST00000580741 MTUS2Q5JR59 1369 aa42.83■■■■■ 4.45
LINC00271-207ENST00000580741 YEATS2Q9ULM3 1422 aa42.78■■■■■ 4.44
LINC00271-207ENST00000580741 CDC42BPAQ5VT25 1732 aa42.77■■■■■ 4.44
LINC00271-207ENST00000580741 ZFYVE16Q7Z3T8 1539 aa42.76■■■■■ 4.44
LINC00271-207ENST00000580741 VPS8Q8N3P4 1428 aa42.75■■■■■ 4.43
LINC00271-207ENST00000580741 ARID4BQ4LE39 1312 aaPredicted RBP42.72■■■■■ 4.43
LINC00271-207ENST00000580741 GPATCH8Q9UKJ3 1502 aaKnown RBP42.71■■■■■ 4.43
LINC00271-207ENST00000580741 MAGI2Q86UL8 1455 aa42.71■■■■■ 4.43
LINC00271-207ENST00000580741 AFAP1Q8N556 730 aa42.7■■■■■ 4.43
LINC00271-207ENST00000580741 EHBP1L1Q8N3D4 1523 aa42.7■■■■■ 4.43
LINC00271-207ENST00000580741 ZNF518AQ6AHZ1 1483 aa42.68■■■■■ 4.42
LINC00271-207ENST00000580741 ABCC1P33527 1531 aa42.68■■■■■ 4.42
LINC00271-207ENST00000580741 ARHGEF12Q9NZN5 1544 aa42.66■■■■■ 4.42
LINC00271-207ENST00000580741 ZNF777Q9ULD5 760 aaPredicted RBP42.66■■■■■ 4.42
LINC00271-207ENST00000580741 CCNB3Q8WWL7 1395 aa42.65■■■■■ 4.42
LINC00271-207ENST00000580741 TRAPPC8Q9Y2L5 1435 aa42.62■■■■■ 4.41
LINC00271-207ENST00000580741 KDM5CP41229 1560 aa42.61■■■■■ 4.41
LINC00271-207ENST00000580741 TIAM1Q13009 1591 aa42.59■■■■■ 4.41
LINC00271-207ENST00000580741 ITSN2Q9NZM3 1697 aa42.58■■■■■ 4.41
LINC00271-207ENST00000580741 SAMD9LQ8IVG5 1584 aa42.58■■■■■ 4.41
LINC00271-207ENST00000580741 CFDP1Q9UEE9 299 aaPredicted RBP42.58■■■■■ 4.41
LINC00271-207ENST00000580741 BCORL1Q5H9F3 1711 aa42.57■■■■■ 4.41
LINC00271-207ENST00000580741 MYT1LQ9UL68 1186 aa42.57■■■■■ 4.41
LINC00271-207ENST00000580741 SIGLEC1Q9BZZ2 1709 aa42.57■■■■■ 4.4
LINC00271-207ENST00000580741 ADAMTSL3P82987 1691 aa42.57■■■■■ 4.4
LINC00271-207ENST00000580741 ATP10AO60312 1499 aa42.52■■■■■ 4.4
LINC00271-207ENST00000580741 HECW2Q9P2P5 1572 aa42.52■■■■■ 4.4
LINC00271-207ENST00000580741 SYCP2Q9BX26 1530 aa42.51■■■■■ 4.39
LINC00271-207ENST00000580741 C9orf84Q5VXU9 1444 aa42.48■■■■■ 4.39
LINC00271-207ENST00000580741 MADDQ8WXG6 1647 aa42.47■■■■■ 4.39
LINC00271-207ENST00000580741 HNRNPMP52272 730 aaKnown RBP eCLIP42.47■■■■■ 4.39
LINC00271-207ENST00000580741 NCOA2Q15596 1464 aa42.47■■■■■ 4.39
LINC00271-207ENST00000580741 MLH3Q9UHC1 1453 aa42.46■■■■■ 4.39
LINC00271-207ENST00000580741 SUPT6HQ7KZ85 1726 aaKnown RBP42.44■■■■■ 4.38
LINC00271-207ENST00000580741 MLECQ14165 292 aa42.44■■■■■ 4.38
LINC00271-207ENST00000580741 DIP2CQ9Y2E4 1556 aa42.43■■■■■ 4.38
LINC00271-207ENST00000580741 PTPRMP28827 1452 aa42.43■■■■■ 4.38
LINC00271-207ENST00000580741 LRRC9Q6ZRR7 1453 aa42.43■■■■■ 4.38
LINC00271-207ENST00000580741 ZNF644Q9H582 1327 aaPredicted RBP42.42■■■■■ 4.38
LINC00271-207ENST00000580741 ABCA6Q8N139 1617 aa42.41■■■■■ 4.38
LINC00271-207ENST00000580741 PLEKHH2Q8IVE3 1493 aa42.4■■■■■ 4.38
LINC00271-207ENST00000580741 KIAA1107Q9UPP5 1409 aa42.39■■■■■ 4.38
LINC00271-207ENST00000580741 KANK4Q5T7N3 995 aaPredicted RBP42.38■■■■■ 4.37
LINC00271-207ENST00000580741 MAP3K1Q13233 1512 aa42.36■■■■■ 4.37
LINC00271-207ENST00000580741 KIDINS220Q9ULH0 1771 aa42.34■■■■■ 4.37
LINC00271-207ENST00000580741 RIMS1Q86UR5 1692 aaKnown RBP42.33■■■■■ 4.37
LINC00271-207ENST00000580741 SPAG9O60271 1321 aaKnown RBP42.32■■■■■ 4.37
LINC00271-207ENST00000580741 REREQ9P2R6 1566 aa42.26■■■■■ 4.36
LINC00271-207ENST00000580741 MBD5Q9P267 1494 aa42.23■■■■■ 4.35
LINC00271-207ENST00000580741 PLPPR3Q6T4P5 718 aa42.23■■■■■ 4.35
LINC00271-207ENST00000580741 ATP7AQ04656 1500 aa42.21■■■■■ 4.35
LINC00271-207ENST00000580741 APLP2Q06481 763 aa42.21■■■■■ 4.35
LINC00271-207ENST00000580741 CAMSAP2Q08AD1 1489 aa42.21■■■■■ 4.35
LINC00271-207ENST00000580741 FER1L4A9Z1Z3 1794 aa42.2■■■■■ 4.35
LINC00271-207ENST00000580741 INO80Q9ULG1 1556 aaPredicted RBP42.18■■■■■ 4.34
LINC00271-207ENST00000580741 AGLP35573 1532 aa42.15■■■■■ 4.34
LINC00271-207ENST00000580741 CCDC141Q6ZP82 1450 aa42.07■■■■■ 4.33
LINC00271-207ENST00000580741 MYOM3Q5VTT5 1437 aa42.06■■■■■ 4.32
LINC00271-207ENST00000580741 A2MP01023 1474 aa42.04■■■■■ 4.32
LINC00271-207ENST00000580741 CEBPAP49715 358 aaPredicted RBP42■■■■■ 4.31
LINC00271-207ENST00000580741 RTEL1-TNFRSF6BF6WH68 1400 aa42■■■■■ 4.31
LINC00271-207ENST00000580741 PLXNC1O60486 1568 aa41.99■■■■■ 4.31
LINC00271-207ENST00000580741 ARHGEF5Q12774 1597 aa41.97■■■■■ 4.31
LINC00271-207ENST00000580741 MIA2Q96PC5 1412 aa41.97■■■■■ 4.31
LINC00271-207ENST00000580741 RSPH4AQ5TD94 716 aa41.97■■■■■ 4.31
LINC00271-207ENST00000580741 ADGBQ8N7X0 1667 aa41.93■■■■■ 4.3
LINC00271-207ENST00000580741 LMTK3Q96Q04 1460 aa41.92■■■■■ 4.3
LINC00271-207ENST00000580741 ESF1Q9H501 851 aaKnown RBP41.92■■■■■ 4.3
LINC00271-207ENST00000580741 TSPY4P0CV99 314 aa41.88■■■■■ 4.29
LINC00271-207ENST00000580741 TSPY10P0CW01 314 aa41.88■■■■■ 4.29
LINC00271-207ENST00000580741 GGT6Q6P531 493 aa41.84■■■■■ 4.29
LINC00271-207ENST00000580741 DHX29Q7Z478 1369 aaKnown RBP41.84■■■■■ 4.29
LINC00271-207ENST00000580741 CNTLNQ9NXG0 1405 aa41.81■■■■■ 4.28
LINC00271-207ENST00000580741 C3P01024 1663 aa41.8■■■■■ 4.28
LINC00271-207ENST00000580741 PTPN23Q9H3S7 1636 aa41.8■■■■■ 4.28
LINC00271-207ENST00000580741 FGD6Q6ZV73 1430 aa41.78■■■■■ 4.28
LINC00271-207ENST00000580741 HSPA2P54652 639 aa41.78■■■■■ 4.28
LINC00271-207ENST00000580741 MAST1Q9Y2H9 1570 aa41.75■■■■■ 4.27
LINC00271-207ENST00000580741 KIF3BO15066 747 aa41.72■■■■■ 4.27
LINC00271-207ENST00000580741 CLTCQ00610 1675 aaKnown RBP41.71■■■■■ 4.27
LINC00271-207ENST00000580741 TCOF1Q13428 1488 aaKnown RBP41.69■■■■■ 4.26
LINC00271-207ENST00000580741 PREX1Q8TCU6 1659 aa41.68■■■■■ 4.26
LINC00271-207ENST00000580741 ZMYM3Q14202 1370 aa41.68■■■■■ 4.26
LINC00271-207ENST00000580741 ABCC5O15440 1437 aa41.68■■■■■ 4.26
LINC00271-207ENST00000580741 MROH2AA6NES4 1674 aa41.67■■■■■ 4.26
LINC00271-207ENST00000580741 UHRF1BP1Q6BDS2 1440 aa41.62■■■■■ 4.25
LINC00271-207ENST00000580741 DAPK1P53355 1430 aa41.61■■■■■ 4.25
LINC00271-207ENST00000580741 PPP6R1Q9UPN7 881 aa41.61■■■■■ 4.25
LINC00271-207ENST00000580741 CROCC2H7BZ55 1655 aa41.6■■■■■ 4.25
LINC00271-207ENST00000580741 SETD1BQ9UPS6 1966 aaKnown RBP41.59■■■■■ 4.25
LINC00271-207ENST00000580741 SHANK2Q9UPX8 1470 aa41.59■■■■■ 4.25
LINC00271-207ENST00000580741 DNMT1P26358 1616 aaKnown RBP41.58■■■■■ 4.25
LINC00271-207ENST00000580741 PPARGC1BQ86YN6 1023 aaKnown RBP41.56■■■■■ 4.24
LINC00271-207ENST00000580741 FAM50AQ14320 339 aaKnown RBP41.54■■■■■ 4.24
LINC00271-207ENST00000580741 NPATQ14207 1427 aa41.52■■■■■ 4.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms