RNA–Protein interactions for RNA: ENST00000580465.5

BPTF-213, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-213ENST00000580465 FAM43BQ6ZT52 329 aaPredicted RBP8.59□□□□□ -1.03
BPTF-213ENST00000580465 USP35Q9P2H5 1018 aa8.59□□□□□ -1.03
BPTF-213ENST00000580465 RGS3P49796 1198 aa8.58□□□□□ -1.04
BPTF-213ENST00000580465 MKRN4PQ13434 485 aaPredicted RBP8.58□□□□□ -1.04
BPTF-213ENST00000580465 NOP58Q9Y2X3 529 aaKnown RBP8.58□□□□□ -1.04
BPTF-213ENST00000580465 DNAJC2Q99543 621 aaKnown RBP8.57□□□□□ -1.04
BPTF-213ENST00000580465 PATL2C9JE40 543 aaKnown RBP8.56□□□□□ -1.04
BPTF-213ENST00000580465 IRX3P78415 501 aaPredicted RBP8.56□□□□□ -1.04
BPTF-213ENST00000580465 ZNF830Q96NB3 372 aaPredicted RBP8.55□□□□□ -1.04
BPTF-213ENST00000580465 MAFGO15525 162 aa8.55□□□□□ -1.04
BPTF-213ENST00000580465 ANAPC15P60006 121 aa8.54□□□□□ -1.04
BPTF-213ENST00000580465 FBLN2P98095 1184 aa8.54□□□□□ -1.04
BPTF-213ENST00000580465 NBR1Q14596 966 aa8.54□□□□□ -1.04
BPTF-213ENST00000580465 VASPP50552 380 aaPredicted RBP8.53□□□□□ -1.04
BPTF-213ENST00000580465 ZNF692Q9BU19 519 aaPredicted RBP8.53□□□□□ -1.04
BPTF-213ENST00000580465 PDCL3Q9H2J4 239 aa8.53□□□□□ -1.04
BPTF-213ENST00000580465 CWC22Q9HCG8 908 aaKnown RBP8.53□□□□□ -1.04
BPTF-213ENST00000580465 ZNF316A6NFI3 1004 aaPredicted RBP8.53□□□□□ -1.04
BPTF-213ENST00000580465 GPATCH11Q8N954 259 aa8.53□□□□□ -1.04
BPTF-213ENST00000580465 TMEM51Q9NW97 253 aa8.53□□□□□ -1.04
BPTF-213ENST00000580465 HDAC5Q9UQL6 1122 aa8.52□□□□□ -1.05
BPTF-213ENST00000580465 PLCD3Q8N3E9 789 aa8.52□□□□□ -1.05
BPTF-213ENST00000580465 ZBTB7CA1YPR0 619 aa8.51□□□□□ -1.05
BPTF-213ENST00000580465 OS9Q13438 667 aaPredicted RBP8.5□□□□□ -1.05
BPTF-213ENST00000580465 ZNF526Q8TF50 670 aaPredicted RBP8.5□□□□□ -1.05
BPTF-213ENST00000580465 TRIM44Q96DX7 344 aaPredicted RBP8.49□□□□□ -1.05
BPTF-213ENST00000580465 SMAP1Q8IYB5 467 aaPredicted RBP8.48□□□□□ -1.05
BPTF-213ENST00000580465 CEP120Q8N960 986 aa8.48□□□□□ -1.05
BPTF-213ENST00000580465 APPP05067 770 aa8.47□□□□□ -1.05
BPTF-213ENST00000580465 PSEN1P49768 467 aa8.47□□□□□ -1.05
BPTF-213ENST00000580465 UTP14CQ5TAP6 766 aaKnown RBP8.47□□□□□ -1.05
BPTF-213ENST00000580465 ANP32AP39687 249 aaKnown RBP8.46□□□□□ -1.05
BPTF-213ENST00000580465 IFNLR1Q8IU57 520 aaPredicted RBP8.46□□□□□ -1.06
BPTF-213ENST00000580465 MIER1Q8N108 512 aa8.46□□□□□ -1.06
BPTF-213ENST00000580465 POLA2Q14181 598 aa8.45□□□□□ -1.06
BPTF-213ENST00000580465 NBPF20Q3BBV1 942 aa8.45□□□□□ -1.06
BPTF-213ENST00000580465 SLC52A1Q9NWF4 448 aa8.45□□□□□ -1.06
BPTF-213ENST00000580465 TRHP20396 242 aaPredicted RBP8.44□□□□□ -1.06
BPTF-213ENST00000580465 SPINK5Q9NQ38 1064 aaPredicted RBP8.44□□□□□ -1.06
BPTF-213ENST00000580465 TAF3Q5VWG9 929 aa8.43□□□□□ -1.06
BPTF-213ENST00000580465 CCDC27Q2M243 656 aa8.42□□□□□ -1.06
BPTF-213ENST00000580465 CC2D1BQ5T0F9 858 aaKnown RBP8.42□□□□□ -1.06
BPTF-213ENST00000580465 NECTIN2Q92692 538 aa8.42□□□□□ -1.06
BPTF-213ENST00000580465 NBPF11Q86T75 865 aa8.41□□□□□ -1.06
BPTF-213ENST00000580465 MAP7D2Q96T17 732 aa8.41□□□□□ -1.06
BPTF-213ENST00000580465 SLC20A2Q08357 652 aa8.4□□□□□ -1.06
BPTF-213ENST00000580465 NBPF1Q3BBV0 1214 aa8.4□□□□□ -1.06
BPTF-213ENST00000580465 CARD10Q9BWT7 1032 aa8.4□□□□□ -1.06
BPTF-213ENST00000580465 ZBTB12Q9Y330 459 aaPredicted RBP8.4□□□□□ -1.06
BPTF-213ENST00000580465 PLEKHD1A6NEE1 506 aa8.39□□□□□ -1.07
BPTF-213ENST00000580465 TTC36A6NLP5 189 aa8.39□□□□□ -1.07
BPTF-213ENST00000580465 FAM177A1Q8N128 213 aaPredicted RBP8.39□□□□□ -1.07
BPTF-213ENST00000580465 RNF39Q9H2S5 420 aa8.39□□□□□ -1.07
BPTF-213ENST00000580465 EGFL6Q8IUX8 553 aa8.39□□□□□ -1.07
BPTF-213ENST00000580465 DDRGK1Q96HY6 314 aa8.39□□□□□ -1.07
BPTF-213ENST00000580465 VGLL3A8MV65 326 aa8.38□□□□□ -1.07
BPTF-213ENST00000580465 SOX12O15370 315 aa8.38□□□□□ -1.07
BPTF-213ENST00000580465 TPM2P07951 284 aa8.38□□□□□ -1.07
BPTF-213ENST00000580465 PPP4R3BQ5MIZ7 849 aa8.38□□□□□ -1.07
BPTF-213ENST00000580465 CAPN15O75808 1086 aa8.37□□□□□ -1.07
BPTF-213ENST00000580465 KIF20AO95235 890 aa8.37□□□□□ -1.07
BPTF-213ENST00000580465 PKD2Q13563 968 aa8.37□□□□□ -1.07
BPTF-213ENST00000580465 GSE1Q14687 1217 aa8.37□□□□□ -1.07
BPTF-213ENST00000580465 HSP90AB4PQ58FF6 505 aa8.37□□□□□ -1.07
BPTF-213ENST00000580465 YY1AP1Q9H869 796 aa8.37□□□□□ -1.07
BPTF-213ENST00000580465 TNNT2P45379 298 aaPredicted RBP8.37□□□□□ -1.07
BPTF-213ENST00000580465 RALBP1Q15311 655 aa8.37□□□□□ -1.07
BPTF-213ENST00000580465 PNNQ9H307 717 aaKnown RBP8.37□□□□□ -1.07
BPTF-213ENST00000580465 SH3BP1Q9Y3L3 701 aa8.35□□□□□ -1.07
BPTF-213ENST00000580465 LAS1LQ9Y4W2 734 aaKnown RBP8.35□□□□□ -1.07
BPTF-213ENST00000580465 PAK3O75914 559 aaPredicted RBP8.35□□□□□ -1.07
BPTF-213ENST00000580465 C1QBPQ07021 282 aaKnown RBP8.35□□□□□ -1.07
BPTF-213ENST00000580465 DMTNQ08495 405 aa8.35□□□□□ -1.07
BPTF-213ENST00000580465 TCERG1O14776 1098 aaKnown RBP8.34□□□□□ -1.07
BPTF-213ENST00000580465 GEMIN8Q9NWZ8 242 aaKnown RBP8.34□□□□□ -1.07
BPTF-213ENST00000580465 HSP90AB3PQ58FF7 597 aa8.33□□□□□ -1.08
BPTF-213ENST00000580465 TMTC2Q8N394 836 aa8.33□□□□□ -1.08
BPTF-213ENST00000580465 CLCN1P35523 988 aa8.32□□□□□ -1.08
BPTF-213ENST00000580465 DNTTIP2Q5QJE6 756 aaKnown RBP8.32□□□□□ -1.08
BPTF-213ENST00000580465 CASC1Q6TDU7 716 aa8.32□□□□□ -1.08
BPTF-213ENST00000580465 IPO9Q96P70 1041 aaKnown RBP8.32□□□□□ -1.08
BPTF-213ENST00000580465 FAM50AQ14320 339 aaKnown RBP8.31□□□□□ -1.08
BPTF-213ENST00000580465 NBPF9Q3BBW0 867 aa8.31□□□□□ -1.08
BPTF-213ENST00000580465 KDM4AO75164 1064 aa8.3□□□□□ -1.08
BPTF-213ENST00000580465 EXOC8Q8IYI6 725 aa8.3□□□□□ -1.08
BPTF-213ENST00000580465 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.3□□□□□ -1.08
BPTF-213ENST00000580465 ZHX1Q9UKY1 873 aaPredicted RBP8.3□□□□□ -1.08
BPTF-213ENST00000580465 GOLGA6L3A6NEY3 463 aa8.3□□□□□ -1.08
BPTF-213ENST00000580465 MTERF4Q7Z6M4 381 aaKnown RBP8.3□□□□□ -1.08
BPTF-213ENST00000580465 ZNF428Q96B54 188 aa8.3□□□□□ -1.08
BPTF-213ENST00000580465 ZBTB47Q9UFB7 747 aaPredicted RBP8.3□□□□□ -1.08
BPTF-213ENST00000580465 LETM1O95202 739 aaPredicted RBP8.29□□□□□ -1.08
BPTF-213ENST00000580465 RAD21O60216 631 aa8.28□□□□□ -1.08
BPTF-213ENST00000580465 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
BPTF-213ENST00000580465 TSHZ1Q6ZSZ6 1077 aa8.28□□□□□ -1.08
BPTF-213ENST00000580465 FAM9BQ8IZU0 186 aa8.28□□□□□ -1.08
BPTF-213ENST00000580465 OTUD6BQ8N6M0 293 aa8.28□□□□□ -1.08
BPTF-213ENST00000580465 SPOCK2Q92563 424 aa8.28□□□□□ -1.08
BPTF-213ENST00000580465 RRAGDQ9NQL2 400 aaPredicted RBP8.28□□□□□ -1.08
BPTF-213ENST00000580465 GTPBP4Q9BZE4 634 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms