RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 PTPN23Q9H3S7 1636 aa25.64■■□□□ 1.69
TMCO1-207ENST00000580248 TCOF1Q13428 1488 aaKnown RBP25.63■■□□□ 1.69
TMCO1-207ENST00000580248 MIA2Q96PC5 1412 aa25.63■■□□□ 1.69
TMCO1-207ENST00000580248 ITSN2Q9NZM3 1697 aa25.62■■□□□ 1.69
TMCO1-207ENST00000580248 CDC42BPAQ5VT25 1732 aa25.61■■□□□ 1.69
TMCO1-207ENST00000580248 ABCA9Q8IUA7 1624 aa25.6■■□□□ 1.69
TMCO1-207ENST00000580248 CFDP1Q9UEE9 299 aaPredicted RBP25.59■■□□□ 1.69
TMCO1-207ENST00000580248 HFM1A2PYH4 1435 aa25.57■■□□□ 1.68
TMCO1-207ENST00000580248 MYO5CQ9NQX4 1742 aa25.56■■□□□ 1.68
TMCO1-207ENST00000580248 PREX2Q70Z35 1606 aa25.56■■□□□ 1.68
TMCO1-207ENST00000580248 PLCH2O75038 1416 aa25.55■■□□□ 1.68
TMCO1-207ENST00000580248 CDC42BPBQ9Y5S2 1711 aa25.53■■□□□ 1.68
TMCO1-207ENST00000580248 GLI2P10070 1586 aa25.53■■□□□ 1.68
TMCO1-207ENST00000580248 DIP2BQ9P265 1576 aa25.51■■□□□ 1.67
TMCO1-207ENST00000580248 ARHGAP5Q13017 1502 aa25.5■■□□□ 1.67
TMCO1-207ENST00000580248 ARAP3Q8WWN8 1544 aa25.5■■□□□ 1.67
TMCO1-207ENST00000580248 PTPRKQ15262 1439 aa25.5■■□□□ 1.67
TMCO1-207ENST00000580248 CD109Q6YHK3 1445 aa25.49■■□□□ 1.67
TMCO1-207ENST00000580248 FAM69CQ0P6D2 419 aa25.49■■□□□ 1.67
TMCO1-207ENST00000580248 ZNF777Q9ULD5 760 aaPredicted RBP25.49■■□□□ 1.67
TMCO1-207ENST00000580248 TIMELESSQ9UNS1 1208 aa25.49■■□□□ 1.67
TMCO1-207ENST00000580248 ZNF644Q9H582 1327 aaPredicted RBP25.49■■□□□ 1.67
TMCO1-207ENST00000580248 AKNAQ7Z591 1439 aa25.47■■□□□ 1.67
TMCO1-207ENST00000580248 EFCAB2Q5VUJ9 269 aa25.47■■□□□ 1.67
TMCO1-207ENST00000580248 CAMSAP2Q08AD1 1489 aa25.46■■□□□ 1.67
TMCO1-207ENST00000580248 NAIPQ13075 1403 aa25.45■■□□□ 1.66
TMCO1-207ENST00000580248 MAP3K4Q9Y6R4 1608 aa25.45■■□□□ 1.66
TMCO1-207ENST00000580248 GCC2Q8IWJ2 1684 aa25.42■■□□□ 1.66
TMCO1-207ENST00000580248 SAMD9LQ8IVG5 1584 aa25.42■■□□□ 1.66
TMCO1-207ENST00000580248 ACIN1Q9UKV3 1341 aaKnown RBP25.41■■□□□ 1.66
TMCO1-207ENST00000580248 FANCAO15360 1455 aa25.41■■□□□ 1.66
TMCO1-207ENST00000580248 KIF13AQ9H1H9 1805 aa25.39■■□□□ 1.66
TMCO1-207ENST00000580248 PLEKHH2Q8IVE3 1493 aa25.38■■□□□ 1.65
TMCO1-207ENST00000580248 KIAA1107Q9UPP5 1409 aa25.37■■□□□ 1.65
TMCO1-207ENST00000580248 HNRNPMP52272 730 aaKnown RBP eCLIP25.34■■□□□ 1.65
TMCO1-207ENST00000580248 DNMT1P26358 1616 aaKnown RBP25.34■■□□□ 1.65
TMCO1-207ENST00000580248 MBD5Q9P267 1494 aa25.34■■□□□ 1.65
TMCO1-207ENST00000580248 CFAP74Q9C0B2 1584 aa25.33■■□□□ 1.65
TMCO1-207ENST00000580248 ABCC5O15440 1437 aa25.33■■□□□ 1.65
TMCO1-207ENST00000580248 DAPK1P53355 1430 aa25.33■■□□□ 1.65
TMCO1-207ENST00000580248 ABCC1P33527 1531 aa25.32■■□□□ 1.64
TMCO1-207ENST00000580248 RSPH4AQ5TD94 716 aa25.32■■□□□ 1.64
TMCO1-207ENST00000580248 ARHGEF5Q12774 1597 aa25.32■■□□□ 1.64
TMCO1-207ENST00000580248 NEO1Q92859 1461 aa25.31■■□□□ 1.64
TMCO1-207ENST00000580248 SYCP2Q9BX26 1530 aa25.31■■□□□ 1.64
TMCO1-207ENST00000580248 ROCK1Q13464 1354 aa25.3■■□□□ 1.64
TMCO1-207ENST00000580248 ARHGEF12Q9NZN5 1544 aa25.3■■□□□ 1.64
TMCO1-207ENST00000580248 ADGRL1O94910 1474 aa25.29■■□□□ 1.64
TMCO1-207ENST00000580248 PPRC1Q5VV67 1664 aaKnown RBP25.27■■□□□ 1.64
TMCO1-207ENST00000580248 TSPOAP1O95153 1857 aa25.27■■□□□ 1.64
TMCO1-207ENST00000580248 TEX14Q8IWB6 1497 aa25.27■■□□□ 1.64
TMCO1-207ENST00000580248 SIN3AQ96ST3 1273 aa25.26■■□□□ 1.63
TMCO1-207ENST00000580248 SCAPERQ9BY12 1400 aa25.26■■□□□ 1.63
TMCO1-207ENST00000580248 CCDC141Q6ZP82 1450 aa25.26■■□□□ 1.63
TMCO1-207ENST00000580248 TRHP20396 242 aaPredicted RBP25.26■■□□□ 1.63
TMCO1-207ENST00000580248 TSPY4P0CV99 314 aa25.24■■□□□ 1.63
TMCO1-207ENST00000580248 TSPY10P0CW01 314 aa25.24■■□□□ 1.63
TMCO1-207ENST00000580248 CHIC2Q9UKJ5 165 aa25.23■■□□□ 1.63
TMCO1-207ENST00000580248 CROCC2H7BZ55 1655 aa25.23■■□□□ 1.63
TMCO1-207ENST00000580248 TRAPPC8Q9Y2L5 1435 aa25.23■■□□□ 1.63
TMCO1-207ENST00000580248 NEUROD1Q13562 356 aa25.23■■□□□ 1.63
TMCO1-207ENST00000580248 SHANK2Q9UPX8 1470 aa25.22■■□□□ 1.63
TMCO1-207ENST00000580248 RRP7BPQ9NSQ0 103 aa25.22■■□□□ 1.63
TMCO1-207ENST00000580248 C9orf84Q5VXU9 1444 aa25.19■■□□□ 1.62
TMCO1-207ENST00000580248 AFAP1Q8N556 730 aa25.19■■□□□ 1.62
TMCO1-207ENST00000580248 CENPBP07199 599 aaPredicted RBP25.18■■□□□ 1.62
TMCO1-207ENST00000580248 PPP1R15AO75807 674 aaPredicted RBP25.17■■□□□ 1.62
TMCO1-207ENST00000580248 ADGRL2O95490 1459 aa25.16■■□□□ 1.62
TMCO1-207ENST00000580248 MIER1Q8N108 512 aa25.16■■□□□ 1.62
TMCO1-207ENST00000580248 MAST1Q9Y2H9 1570 aa25.15■■□□□ 1.62
TMCO1-207ENST00000580248 DENND4BO75064 1496 aaPredicted RBP25.15■■□□□ 1.62
TMCO1-207ENST00000580248 TONSLQ96HA7 1378 aa25.15■■□□□ 1.62
TMCO1-207ENST00000580248 POGZQ7Z3K3 1410 aa25.15■■□□□ 1.62
TMCO1-207ENST00000580248 ADGBQ8N7X0 1667 aa25.15■■□□□ 1.62
TMCO1-207ENST00000580248 ZNF518AQ6AHZ1 1483 aa25.15■■□□□ 1.62
TMCO1-207ENST00000580248 NCOA1Q15788 1441 aa25.14■■□□□ 1.62
TMCO1-207ENST00000580248 ANKRD30AQ9BXX3 1397 aa25.14■■□□□ 1.61
TMCO1-207ENST00000580248 KDM6BO15054 1643 aa25.13■■□□□ 1.61
TMCO1-207ENST00000580248 SPAG9O60271 1321 aaKnown RBP25.13■■□□□ 1.61
TMCO1-207ENST00000580248 RTEL1-TNFRSF6BF6WH68 1400 aa25.1■■□□□ 1.61
TMCO1-207ENST00000580248 RAPGEF3O95398 923 aa25.09■■□□□ 1.61
TMCO1-207ENST00000580248 KDM5CP41229 1560 aa25.09■■□□□ 1.61
TMCO1-207ENST00000580248 TRIM52Q96A61 297 aa25.09■■□□□ 1.61
TMCO1-207ENST00000580248 RICTORQ6R327 1708 aa25.07■■□□□ 1.6
TMCO1-207ENST00000580248 ZFYVE16Q7Z3T8 1539 aa25.06■■□□□ 1.6
TMCO1-207ENST00000580248 INO80Q9ULG1 1556 aaPredicted RBP25.05■■□□□ 1.6
TMCO1-207ENST00000580248 MPHOSPH9Q99550 1183 aa25.05■■□□□ 1.6
TMCO1-207ENST00000580248 PLXNC1O60486 1568 aa25.05■■□□□ 1.6
TMCO1-207ENST00000580248 ATP7AQ04656 1500 aa25.05■■□□□ 1.6
TMCO1-207ENST00000580248 MLH3Q9UHC1 1453 aa25.04■■□□□ 1.6
TMCO1-207ENST00000580248 KIF15Q9NS87 1388 aa25.04■■□□□ 1.6
TMCO1-207ENST00000580248 MYT1LQ9UL68 1186 aa25.03■■□□□ 1.6
TMCO1-207ENST00000580248 FRMPD1Q5SYB0 1578 aa25.02■■□□□ 1.6
TMCO1-207ENST00000580248 COL17A1Q9UMD9 1497 aaPredicted RBP25.02■■□□□ 1.6
TMCO1-207ENST00000580248 HECW2Q9P2P5 1572 aa25■■□□□ 1.59
TMCO1-207ENST00000580248 KIDINS220Q9ULH0 1771 aa25■■□□□ 1.59
TMCO1-207ENST00000580248 ANKRD50Q9ULJ7 1429 aa24.98■■□□□ 1.59
TMCO1-207ENST00000580248 ZMYM4Q5VZL5 1548 aa24.98■■□□□ 1.59
TMCO1-207ENST00000580248 DUOX2Q9NRD8 1548 aa24.96■■□□□ 1.59
TMCO1-207ENST00000580248 MAGI2Q86UL8 1455 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms