RNA–Protein interactions for RNA: ENST00000580081.1

CLTC-212, Transcript of clathrin heavy chain, humanhuman

TSL 4

Gene CLTC, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-212ENST00000580081 RIMBP3CA6NJZ7 1639 aa13.46□□□□□ -0.25
CLTC-212ENST00000580081 RIMBP3BA6NNM3 1639 aa13.46□□□□□ -0.25
CLTC-212ENST00000580081 RIMBP3Q9UFD9 1639 aa13.46□□□□□ -0.25
CLTC-212ENST00000580081 ARID3CA6NKF2 412 aa13.46□□□□□ -0.25
CLTC-212ENST00000580081 ZCCHC11Q5TAX3 1644 aaKnown RBP13.46□□□□□ -0.26
CLTC-212ENST00000580081 NCOA2Q15596 1464 aa13.44□□□□□ -0.26
CLTC-212ENST00000580081 RRBP1Q9P2E9 1410 aaKnown RBP13.42□□□□□ -0.26
CLTC-212ENST00000580081 PLEKHD1A6NEE1 506 aa13.42□□□□□ -0.26
CLTC-212ENST00000580081 PHLDB1Q86UU1 1377 aa13.42□□□□□ -0.26
CLTC-212ENST00000580081 KIF14Q15058 1648 aa13.42□□□□□ -0.26
CLTC-212ENST00000580081 PCGF6Q9BYE7 350 aa13.41□□□□□ -0.26
CLTC-212ENST00000580081 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
CLTC-212ENST00000580081 MYOM3Q5VTT5 1437 aa13.39□□□□□ -0.27
CLTC-212ENST00000580081 CCNB3Q8WWL7 1395 aa13.38□□□□□ -0.27
CLTC-212ENST00000580081 FGD6Q6ZV73 1430 aa13.37□□□□□ -0.27
CLTC-212ENST00000580081 ITSN2Q9NZM3 1697 aa13.37□□□□□ -0.27
CLTC-212ENST00000580081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.35□□□□□ -0.279e-6■□□□□ 9.6
CLTC-212ENST00000580081 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLTC-212ENST00000580081 MIA2Q96PC5 1412 aa13.35□□□□□ -0.27
CLTC-212ENST00000580081 ABCC10Q5T3U5 1492 aa13.35□□□□□ -0.27
CLTC-212ENST00000580081 WDR7Q9Y4E6 1490 aa13.35□□□□□ -0.27
CLTC-212ENST00000580081 PTPN23Q9H3S7 1636 aa13.32□□□□□ -0.28
CLTC-212ENST00000580081 TCOF1Q13428 1488 aaKnown RBP13.32□□□□□ -0.28
CLTC-212ENST00000580081 CYB5RLQ6IPT4 315 aa13.32□□□□□ -0.28
CLTC-212ENST00000580081 ASXL2Q76L83 1435 aa13.31□□□□□ -0.28
CLTC-212ENST00000580081 CDC42BPAQ5VT25 1732 aa13.31□□□□□ -0.28
CLTC-212ENST00000580081 GPATCH8Q9UKJ3 1502 aaKnown RBP13.31□□□□□ -0.28
CLTC-212ENST00000580081 POLA2Q14181 598 aa13.31□□□□□ -0.28
CLTC-212ENST00000580081 MAPKBP1O60336 1514 aa13.3□□□□□ -0.28
CLTC-212ENST00000580081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.3□□□□□ -0.28
CLTC-212ENST00000580081 TTC37Q6PGP7 1564 aa13.3□□□□□ -0.28
CLTC-212ENST00000580081 PREX2Q70Z35 1606 aa13.3□□□□□ -0.28
CLTC-212ENST00000580081 POTEHQ6S545 545 aa13.29□□□□□ -0.28
CLTC-212ENST00000580081 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
CLTC-212ENST00000580081 MYO5CQ9NQX4 1742 aa13.28□□□□□ -0.28
CLTC-212ENST00000580081 FAM50AQ14320 339 aaKnown RBP13.27□□□□□ -0.29
CLTC-212ENST00000580081 ABCA9Q8IUA7 1624 aa13.27□□□□□ -0.29
CLTC-212ENST00000580081 ZBTB22O15209 634 aa13.26□□□□□ -0.29
CLTC-212ENST00000580081 ARAP3Q8WWN8 1544 aa13.26□□□□□ -0.29
CLTC-212ENST00000580081 CAMSAP2Q08AD1 1489 aa13.25□□□□□ -0.29
CLTC-212ENST00000580081 KCNH8Q96L42 1107 aa13.25□□□□□ -0.29
CLTC-212ENST00000580081 CFDP1Q9UEE9 299 aaPredicted RBP13.25□□□□□ -0.29
CLTC-212ENST00000580081 CDC42BPBQ9Y5S2 1711 aa13.25□□□□□ -0.29
CLTC-212ENST00000580081 ARHGAP5Q13017 1502 aa13.23□□□□□ -0.29
CLTC-212ENST00000580081 PLCH2O75038 1416 aa13.22□□□□□ -0.29
CLTC-212ENST00000580081 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.29
CLTC-212ENST00000580081 PLEKHH2Q8IVE3 1493 aa13.21□□□□□ -0.3
CLTC-212ENST00000580081 SAMD9LQ8IVG5 1584 aa13.2□□□□□ -0.3
CLTC-212ENST00000580081 GLI2P10070 1586 aa13.2□□□□□ -0.3
CLTC-212ENST00000580081 ARHGEF5Q12774 1597 aa13.19□□□□□ -0.3
CLTC-212ENST00000580081 ITGAEP38570 1179 aa13.18□□□□□ -0.3
CLTC-212ENST00000580081 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
CLTC-212ENST00000580081 DAPK1P53355 1430 aa13.18□□□□□ -0.3
CLTC-212ENST00000580081 CROCC2H7BZ55 1655 aa13.18□□□□□ -0.3
CLTC-212ENST00000580081 ZNF644Q9H582 1327 aaPredicted RBP13.17□□□□□ -0.3
CLTC-212ENST00000580081 CFAP74Q9C0B2 1584 aa13.17□□□□□ -0.3
CLTC-212ENST00000580081 DIP2BQ9P265 1576 aa13.17□□□□□ -0.3
CLTC-212ENST00000580081 EFCAB2Q5VUJ9 269 aa13.17□□□□□ -0.3
CLTC-212ENST00000580081 ZNF777Q9ULD5 760 aaPredicted RBP13.17□□□□□ -0.3
CLTC-212ENST00000580081 ABCC5O15440 1437 aa13.16□□□□□ -0.3
CLTC-212ENST00000580081 AKNAQ7Z591 1439 aa13.16□□□□□ -0.3
CLTC-212ENST00000580081 KIAA1107Q9UPP5 1409 aa13.16□□□□□ -0.3
CLTC-212ENST00000580081 ABCC1P33527 1531 aa13.16□□□□□ -0.3
CLTC-212ENST00000580081 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
CLTC-212ENST00000580081 PTPRKQ15262 1439 aa13.15□□□□□ -0.3
CLTC-212ENST00000580081 CD109Q6YHK3 1445 aa13.15□□□□□ -0.3
CLTC-212ENST00000580081 MAP3K4Q9Y6R4 1608 aa13.15□□□□□ -0.3
CLTC-212ENST00000580081 FANCAO15360 1455 aa13.15□□□□□ -0.3
CLTC-212ENST00000580081 SYCP2Q9BX26 1530 aa13.14□□□□□ -0.31
CLTC-212ENST00000580081 RSPH4AQ5TD94 716 aa13.14□□□□□ -0.31
CLTC-212ENST00000580081 CCDC141Q6ZP82 1450 aa13.14□□□□□ -0.31
CLTC-212ENST00000580081 MBD5Q9P267 1494 aa13.14□□□□□ -0.31
CLTC-212ENST00000580081 ADGBQ8N7X0 1667 aa13.14□□□□□ -0.31
CLTC-212ENST00000580081 ROCK1Q13464 1354 aa13.13□□□□□ -0.31
CLTC-212ENST00000580081 HFM1A2PYH4 1435 aa13.13□□□□□ -0.31
CLTC-212ENST00000580081 GCC2Q8IWJ2 1684 aa13.12□□□□□ -0.31
CLTC-212ENST00000580081 ADGRL2O95490 1459 aa13.12□□□□□ -0.31
CLTC-212ENST00000580081 SETD5Q9C0A6 1442 aa13.12□□□□□ -0.31
CLTC-212ENST00000580081 MAST1Q9Y2H9 1570 aa13.11□□□□□ -0.31
CLTC-212ENST00000580081 NEO1Q92859 1461 aa13.1□□□□□ -0.31
CLTC-212ENST00000580081 C9orf84Q5VXU9 1444 aa13.1□□□□□ -0.31
CLTC-212ENST00000580081 ADGRL1O94910 1474 aa13.1□□□□□ -0.31
CLTC-212ENST00000580081 NAIPQ13075 1403 aa13.09□□□□□ -0.31
CLTC-212ENST00000580081 ARHGEF12Q9NZN5 1544 aa13.08□□□□□ -0.31
CLTC-212ENST00000580081 TSPY4P0CV99 314 aa13.08□□□□□ -0.32
CLTC-212ENST00000580081 TSPY10P0CW01 314 aa13.08□□□□□ -0.32
CLTC-212ENST00000580081 HNRNPMP52272 730 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLTC-212ENST00000580081 FAM69CQ0P6D2 419 aa13.08□□□□□ -0.32
CLTC-212ENST00000580081 KIF13AQ9H1H9 1805 aa13.08□□□□□ -0.32
CLTC-212ENST00000580081 ANKRD30AQ9BXX3 1397 aa13.07□□□□□ -0.32
CLTC-212ENST00000580081 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
CLTC-212ENST00000580081 HRCP23327 699 aa13.07□□□□□ -0.32
CLTC-212ENST00000580081 NCOA1Q15788 1441 aa13.06□□□□□ -0.32
CLTC-212ENST00000580081 TEX14Q8IWB6 1497 aa13.06□□□□□ -0.32
CLTC-212ENST00000580081 CHIC2Q9UKJ5 165 aa13.06□□□□□ -0.32
CLTC-212ENST00000580081 PLXNC1O60486 1568 aa13.06□□□□□ -0.32
CLTC-212ENST00000580081 SCAPERQ9BY12 1400 aa13.05□□□□□ -0.32
CLTC-212ENST00000580081 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
CLTC-212ENST00000580081 PPRC1Q5VV67 1664 aaKnown RBP13.04□□□□□ -0.32
CLTC-212ENST00000580081 ACIN1Q9UKV3 1341 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms