RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 NCOA2Q15596 1464 aa33.89■■■■□ 3.02
TSEN54-207ENST00000580013 CDC42BPBQ9Y5S2 1711 aa33.87■■■■□ 3.01
TSEN54-207ENST00000580013 CDC42BPAQ5VT25 1732 aa33.84■■■■□ 3.01
TSEN54-207ENST00000580013 ARHGAP5Q13017 1502 aa33.84■■■■□ 3.01
TSEN54-207ENST00000580013 PREX2Q70Z35 1606 aa33.83■■■■□ 3.01
TSEN54-207ENST00000580013 SUPT6HQ7KZ85 1726 aaKnown RBP33.82■■■■□ 3
TSEN54-207ENST00000580013 RAPGEF3O95398 923 aa33.82■■■■□ 3
TSEN54-207ENST00000580013 CFDP1Q9UEE9 299 aaPredicted RBP33.82■■■■□ 3
TSEN54-207ENST00000580013 CFAP74Q9C0B2 1584 aa33.81■■■■□ 3
TSEN54-207ENST00000580013 SCAPERQ9BY12 1400 aa33.79■■■■□ 3
TSEN54-207ENST00000580013 DENND4BO75064 1496 aaPredicted RBP33.77■■■■□ 3
TSEN54-207ENST00000580013 ADGRL1O94910 1474 aa33.76■■■■□ 3
TSEN54-207ENST00000580013 ZNF777Q9ULD5 760 aaPredicted RBP33.73■■■□□ 2.99
TSEN54-207ENST00000580013 ARHGEF12Q9NZN5 1544 aa33.73■■■□□ 2.99
TSEN54-207ENST00000580013 ZNF644Q9H582 1327 aaPredicted RBP33.72■■■□□ 2.99
TSEN54-207ENST00000580013 KIAA1107Q9UPP5 1409 aa33.69■■■□□ 2.98
TSEN54-207ENST00000580013 FRMPD1Q5SYB0 1578 aa33.68■■■□□ 2.98
TSEN54-207ENST00000580013 AFAP1Q8N556 730 aa33.67■■■□□ 2.98
TSEN54-207ENST00000580013 SAMD9LQ8IVG5 1584 aa33.67■■■□□ 2.98
TSEN54-207ENST00000580013 MYOM3Q5VTT5 1437 aa33.66■■■□□ 2.98
TSEN54-207ENST00000580013 POGZQ7Z3K3 1410 aa33.66■■■□□ 2.98
TSEN54-207ENST00000580013 ABCC1P33527 1531 aa33.65■■■□□ 2.98
TSEN54-207ENST00000580013 HNRNPMP52272 730 aaKnown RBP eCLIP33.65■■■□□ 2.98
TSEN54-207ENST00000580013 RICTORQ6R327 1708 aa33.64■■■□□ 2.98
TSEN54-207ENST00000580013 TRAPPC8Q9Y2L5 1435 aa33.63■■■□□ 2.97
TSEN54-207ENST00000580013 ITSN2Q9NZM3 1697 aa33.63■■■□□ 2.97
TSEN54-207ENST00000580013 MIA2Q96PC5 1412 aa33.62■■■□□ 2.97
TSEN54-207ENST00000580013 PLEKHH2Q8IVE3 1493 aa33.62■■■□□ 2.97
TSEN54-207ENST00000580013 PPARGC1BQ86YN6 1023 aaKnown RBP33.6■■■□□ 2.97
TSEN54-207ENST00000580013 MBD5Q9P267 1494 aa33.59■■■□□ 2.97
TSEN54-207ENST00000580013 ZNF518AQ6AHZ1 1483 aa33.57■■■□□ 2.97
TSEN54-207ENST00000580013 ZMYM4Q5VZL5 1548 aa33.56■■■□□ 2.96
TSEN54-207ENST00000580013 MAGI2Q86UL8 1455 aa33.54■■■□□ 2.96
TSEN54-207ENST00000580013 SYCP2Q9BX26 1530 aa33.53■■■□□ 2.96
TSEN54-207ENST00000580013 KDM5CP41229 1560 aa33.53■■■□□ 2.96
TSEN54-207ENST00000580013 CAMSAP2Q08AD1 1489 aa33.52■■■□□ 2.96
TSEN54-207ENST00000580013 RSPH4AQ5TD94 716 aa33.51■■■□□ 2.95
TSEN54-207ENST00000580013 FGD6Q6ZV73 1430 aa33.5■■■□□ 2.95
TSEN54-207ENST00000580013 MLH3Q9UHC1 1453 aa33.49■■■□□ 2.95
TSEN54-207ENST00000580013 YEATS2Q9ULM3 1422 aa33.48■■■□□ 2.95
TSEN54-207ENST00000580013 TCOF1Q13428 1488 aaKnown RBP33.44■■■□□ 2.94
TSEN54-207ENST00000580013 SPAG9O60271 1321 aaKnown RBP33.42■■■□□ 2.94
TSEN54-207ENST00000580013 ZFYVE16Q7Z3T8 1539 aa33.4■■■□□ 2.94
TSEN54-207ENST00000580013 PTPN23Q9H3S7 1636 aa33.39■■■□□ 2.93
TSEN54-207ENST00000580013 ARHGEF5Q12774 1597 aa33.38■■■□□ 2.93
TSEN54-207ENST00000580013 ARHGEF40Q8TER5 1519 aa33.37■■■□□ 2.93
TSEN54-207ENST00000580013 ATP10AO60312 1499 aa33.37■■■□□ 2.93
TSEN54-207ENST00000580013 CCDC141Q6ZP82 1450 aa33.37■■■□□ 2.93
TSEN54-207ENST00000580013 HECW2Q9P2P5 1572 aa33.35■■■□□ 2.93
TSEN54-207ENST00000580013 RTEL1-TNFRSF6BF6WH68 1400 aa33.35■■■□□ 2.93
TSEN54-207ENST00000580013 KIDINS220Q9ULH0 1771 aa33.34■■■□□ 2.93
TSEN54-207ENST00000580013 TSPY4P0CV99 314 aa33.32■■■□□ 2.92
TSEN54-207ENST00000580013 TSPY10P0CW01 314 aa33.32■■■□□ 2.92
TSEN54-207ENST00000580013 MYT1LQ9UL68 1186 aa33.32■■■□□ 2.92
TSEN54-207ENST00000580013 ABCC5O15440 1437 aa33.31■■■□□ 2.92
TSEN54-207ENST00000580013 DIP2CQ9Y2E4 1556 aa33.28■■■□□ 2.92
TSEN54-207ENST00000580013 INO80Q9ULG1 1556 aaPredicted RBP33.27■■■□□ 2.92
TSEN54-207ENST00000580013 KDM4FA0A1W2PPD8 638 aa33.27■■■□□ 2.92
TSEN54-207ENST00000580013 ATP7AQ04656 1500 aa33.27■■■□□ 2.92
TSEN54-207ENST00000580013 C9orf84Q5VXU9 1444 aa33.27■■■□□ 2.92
TSEN54-207ENST00000580013 FAM50AQ14320 339 aaKnown RBP33.26■■■□□ 2.91
TSEN54-207ENST00000580013 ABCA6Q8N139 1617 aa33.25■■■□□ 2.91
TSEN54-207ENST00000580013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.25■■■□□ 2.91
TSEN54-207ENST00000580013 DAPK1P53355 1430 aa33.22■■■□□ 2.91
TSEN54-207ENST00000580013 RRBP1Q9P2E9 1410 aaKnown RBP33.22■■■□□ 2.91
TSEN54-207ENST00000580013 REREQ9P2R6 1566 aa33.21■■■□□ 2.91
TSEN54-207ENST00000580013 SIGLEC1Q9BZZ2 1709 aa33.2■■■□□ 2.91
TSEN54-207ENST00000580013 MAST1Q9Y2H9 1570 aa33.2■■■□□ 2.91
TSEN54-207ENST00000580013 DNMT1P26358 1616 aaKnown RBP33.18■■■□□ 2.9
TSEN54-207ENST00000580013 ARID4BQ4LE39 1312 aaPredicted RBP33.18■■■□□ 2.9
TSEN54-207ENST00000580013 SHANK2Q9UPX8 1470 aa33.16■■■□□ 2.9
TSEN54-207ENST00000580013 DHX29Q7Z478 1369 aaKnown RBP33.15■■■□□ 2.9
TSEN54-207ENST00000580013 AGLP35573 1532 aa33.14■■■□□ 2.9
TSEN54-207ENST00000580013 A2MP01023 1474 aa33.14■■■□□ 2.9
TSEN54-207ENST00000580013 PTPRKQ15262 1439 aa33.13■■■□□ 2.89
TSEN54-207ENST00000580013 CHIC2Q9UKJ5 165 aa33.1■■■□□ 2.89
TSEN54-207ENST00000580013 PLXNC1O60486 1568 aa33.09■■■□□ 2.89
TSEN54-207ENST00000580013 CROCC2H7BZ55 1655 aa33.07■■■□□ 2.88
TSEN54-207ENST00000580013 NCOA1Q15788 1441 aa33.06■■■□□ 2.88
TSEN54-207ENST00000580013 BCORL1Q5H9F3 1711 aa33.05■■■□□ 2.88
TSEN54-207ENST00000580013 ADGBQ8N7X0 1667 aa33.05■■■□□ 2.88
TSEN54-207ENST00000580013 RRP7BPQ9NSQ0 103 aa33.05■■■□□ 2.88
TSEN54-207ENST00000580013 ADGRL2O95490 1459 aa33.04■■■□□ 2.88
TSEN54-207ENST00000580013 ADAMTSL3P82987 1691 aa33.04■■■□□ 2.88
TSEN54-207ENST00000580013 MLECQ14165 292 aa33.03■■■□□ 2.88
TSEN54-207ENST00000580013 ANKRD30AQ9BXX3 1397 aa33.02■■■□□ 2.88
TSEN54-207ENST00000580013 KIF15Q9NS87 1388 aa32.99■■■□□ 2.87
TSEN54-207ENST00000580013 ROCK1Q13464 1354 aa32.96■■■□□ 2.87
TSEN54-207ENST00000580013 KIF3BO15066 747 aa32.96■■■□□ 2.87
TSEN54-207ENST00000580013 ITGAEP38570 1179 aa32.96■■■□□ 2.87
TSEN54-207ENST00000580013 DUOX2Q9NRD8 1548 aa32.95■■■□□ 2.87
TSEN54-207ENST00000580013 PPP6R1Q9UPN7 881 aa32.93■■■□□ 2.86
TSEN54-207ENST00000580013 GGT6Q6P531 493 aa32.91■■■□□ 2.86
TSEN54-207ENST00000580013 MADDQ8WXG6 1647 aa32.88■■■□□ 2.85
TSEN54-207ENST00000580013 ERBINQ96RT1 1412 aa32.86■■■□□ 2.85
TSEN54-207ENST00000580013 PTPRMP28827 1452 aa32.84■■■□□ 2.85
TSEN54-207ENST00000580013 EIF2AK4Q9P2K8 1649 aaKnown RBP32.8■■■□□ 2.84
TSEN54-207ENST00000580013 ANKRD50Q9ULJ7 1429 aa32.8■■■□□ 2.84
TSEN54-207ENST00000580013 CNTLNQ9NXG0 1405 aa32.77■■■□□ 2.84
TSEN54-207ENST00000580013 AEBP2Q6ZN18 517 aaPredicted RBP32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms