RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 TCOF1Q13428 1488 aaKnown RBP21.11■□□□□ 0.97
TSEN54-206ENST00000579449 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.1■□□□□ 0.97
TSEN54-206ENST00000579449 PLCH2O75038 1416 aa21.1■□□□□ 0.97
TSEN54-206ENST00000579449 DIP2BQ9P265 1576 aa21.09■□□□□ 0.97
TSEN54-206ENST00000579449 ARHGAP5Q13017 1502 aa21.09■□□□□ 0.97
TSEN54-206ENST00000579449 GLI2P10070 1586 aa21.08■□□□□ 0.97
TSEN54-206ENST00000579449 ZNF777Q9ULD5 760 aaPredicted RBP21.07■□□□□ 0.96
TSEN54-206ENST00000579449 ZNF644Q9H582 1327 aaPredicted RBP21.06■□□□□ 0.96
TSEN54-206ENST00000579449 ARAP3Q8WWN8 1544 aa21.06■□□□□ 0.96
TSEN54-206ENST00000579449 CAMSAP2Q08AD1 1489 aa21.06■□□□□ 0.96
TSEN54-206ENST00000579449 CD109Q6YHK3 1445 aa21.05■□□□□ 0.96
TSEN54-206ENST00000579449 FAM69CQ0P6D2 419 aa21.04■□□□□ 0.96
TSEN54-206ENST00000579449 MAP3K4Q9Y6R4 1608 aa21.04■□□□□ 0.96
TSEN54-206ENST00000579449 SAMD9LQ8IVG5 1584 aa21.03■□□□□ 0.96
TSEN54-206ENST00000579449 KIF13AQ9H1H9 1805 aa21.03■□□□□ 0.96
TSEN54-206ENST00000579449 EFCAB2Q5VUJ9 269 aa21.02■□□□□ 0.96
TSEN54-206ENST00000579449 ITGAEP38570 1179 aa21.01■□□□□ 0.95
TSEN54-206ENST00000579449 FANCAO15360 1455 aa20.98■□□□□ 0.95
TSEN54-206ENST00000579449 DNMT1P26358 1616 aaKnown RBP20.97■□□□□ 0.95
TSEN54-206ENST00000579449 TSPOAP1O95153 1857 aa20.96■□□□□ 0.95
TSEN54-206ENST00000579449 PLEKHH2Q8IVE3 1493 aa20.95■□□□□ 0.94
TSEN54-206ENST00000579449 CFAP74Q9C0B2 1584 aa20.95■□□□□ 0.94
TSEN54-206ENST00000579449 DAPK1P53355 1430 aa20.95■□□□□ 0.94
TSEN54-206ENST00000579449 SYCP2Q9BX26 1530 aa20.94■□□□□ 0.94
TSEN54-206ENST00000579449 HNRNPMP52272 730 aaKnown RBP eCLIP20.94■□□□□ 0.94
TSEN54-206ENST00000579449 ABCC5O15440 1437 aa20.94■□□□□ 0.94
TSEN54-206ENST00000579449 PTPRKQ15262 1439 aa20.94■□□□□ 0.94
TSEN54-206ENST00000579449 KIAA1107Q9UPP5 1409 aa20.94■□□□□ 0.94
TSEN54-206ENST00000579449 ABCC1P33527 1531 aa20.94■□□□□ 0.94
TSEN54-206ENST00000579449 MBD5Q9P267 1494 aa20.93■□□□□ 0.94
TSEN54-206ENST00000579449 ARHGEF5Q12774 1597 aa20.93■□□□□ 0.94
TSEN54-206ENST00000579449 PPRC1Q5VV67 1664 aaKnown RBP20.93■□□□□ 0.94
TSEN54-206ENST00000579449 AKNAQ7Z591 1439 aa20.92■□□□□ 0.94
TSEN54-206ENST00000579449 ARHGEF12Q9NZN5 1544 aa20.92■□□□□ 0.94
TSEN54-206ENST00000579449 CROCC2H7BZ55 1655 aa20.92■□□□□ 0.94
TSEN54-206ENST00000579449 NEO1Q92859 1461 aa20.89■□□□□ 0.94
TSEN54-206ENST00000579449 ADGRL1O94910 1474 aa20.88■□□□□ 0.93
TSEN54-206ENST00000579449 CCDC141Q6ZP82 1450 aa20.88■□□□□ 0.93
TSEN54-206ENST00000579449 RSPH4AQ5TD94 716 aa20.88■□□□□ 0.93
TSEN54-206ENST00000579449 CHIC2Q9UKJ5 165 aa20.88■□□□□ 0.93
TSEN54-206ENST00000579449 SCAPERQ9BY12 1400 aa20.87■□□□□ 0.93
TSEN54-206ENST00000579449 TEX14Q8IWB6 1497 aa20.85■□□□□ 0.93
TSEN54-206ENST00000579449 TRAPPC8Q9Y2L5 1435 aa20.85■□□□□ 0.93
TSEN54-206ENST00000579449 ADGBQ8N7X0 1667 aa20.84■□□□□ 0.93
TSEN54-206ENST00000579449 SHANK2Q9UPX8 1470 aa20.84■□□□□ 0.93
TSEN54-206ENST00000579449 TRHP20396 242 aaPredicted RBP20.84■□□□□ 0.93
TSEN54-206ENST00000579449 TSPY4P0CV99 314 aa20.83■□□□□ 0.93
TSEN54-206ENST00000579449 TSPY10P0CW01 314 aa20.83■□□□□ 0.93
TSEN54-206ENST00000579449 C9orf84Q5VXU9 1444 aa20.82■□□□□ 0.92
TSEN54-206ENST00000579449 ROCK1Q13464 1354 aa20.81■□□□□ 0.92
TSEN54-206ENST00000579449 MAST1Q9Y2H9 1570 aa20.8■□□□□ 0.92
TSEN54-206ENST00000579449 ADGRL2O95490 1459 aa20.8■□□□□ 0.92
TSEN54-206ENST00000579449 AFAP1Q8N556 730 aa20.79■□□□□ 0.92
TSEN54-206ENST00000579449 RRP7BPQ9NSQ0 103 aa20.79■□□□□ 0.92
TSEN54-206ENST00000579449 HFM1A2PYH4 1435 aa20.78■□□□□ 0.92
TSEN54-206ENST00000579449 SETD5Q9C0A6 1442 aa20.78■□□□□ 0.92
TSEN54-206ENST00000579449 DENND4BO75064 1496 aaPredicted RBP20.77■□□□□ 0.92
TSEN54-206ENST00000579449 NAIPQ13075 1403 aa20.77■□□□□ 0.91
TSEN54-206ENST00000579449 NCOA1Q15788 1441 aa20.77■□□□□ 0.91
TSEN54-206ENST00000579449 POGZQ7Z3K3 1410 aa20.77■□□□□ 0.91
TSEN54-206ENST00000579449 GCC2Q8IWJ2 1684 aa20.77■□□□□ 0.91
TSEN54-206ENST00000579449 ZNF518AQ6AHZ1 1483 aa20.76■□□□□ 0.91
TSEN54-206ENST00000579449 ANKRD30AQ9BXX3 1397 aa20.76■□□□□ 0.91
TSEN54-206ENST00000579449 RICTORQ6R327 1708 aa20.75■□□□□ 0.91
TSEN54-206ENST00000579449 SPAG9O60271 1321 aaKnown RBP20.75■□□□□ 0.91
TSEN54-206ENST00000579449 KDM5CP41229 1560 aa20.73■□□□□ 0.91
TSEN54-206ENST00000579449 RAB3GAP2Q9H2M9 1393 aa20.72■□□□□ 0.91
TSEN54-206ENST00000579449 RTEL1-TNFRSF6BF6WH68 1400 aa20.72■□□□□ 0.91
TSEN54-206ENST00000579449 RAPGEF3O95398 923 aa20.72■□□□□ 0.91
TSEN54-206ENST00000579449 PLXNC1O60486 1568 aa20.72■□□□□ 0.91
TSEN54-206ENST00000579449 INO80Q9ULG1 1556 aaPredicted RBP20.72■□□□□ 0.91
TSEN54-206ENST00000579449 ATP7AQ04656 1500 aa20.71■□□□□ 0.91
TSEN54-206ENST00000579449 ZFYVE16Q7Z3T8 1539 aa20.71■□□□□ 0.91
TSEN54-206ENST00000579449 FRMPD1Q5SYB0 1578 aa20.7■□□□□ 0.9
TSEN54-206ENST00000579449 KIDINS220Q9ULH0 1771 aa20.69■□□□□ 0.9
TSEN54-206ENST00000579449 KIF15Q9NS87 1388 aa20.69■□□□□ 0.9
TSEN54-206ENST00000579449 KDM6BO15054 1643 aa20.68■□□□□ 0.9
TSEN54-206ENST00000579449 MYT1LQ9UL68 1186 aa20.68■□□□□ 0.9
TSEN54-206ENST00000579449 HECW2Q9P2P5 1572 aa20.68■□□□□ 0.9
TSEN54-206ENST00000579449 MLH3Q9UHC1 1453 aa20.67■□□□□ 0.9
TSEN54-206ENST00000579449 HRCP23327 699 aa20.66■□□□□ 0.9
TSEN54-206ENST00000579449 COL17A1Q9UMD9 1497 aaPredicted RBP20.66■□□□□ 0.9
TSEN54-206ENST00000579449 ZMYM4Q5VZL5 1548 aa20.63■□□□□ 0.89
TSEN54-206ENST00000579449 DUOX2Q9NRD8 1548 aa20.63■□□□□ 0.89
TSEN54-206ENST00000579449 ANKRD50Q9ULJ7 1429 aa20.63■□□□□ 0.89
TSEN54-206ENST00000579449 ABCA6Q8N139 1617 aa20.6■□□□□ 0.89
TSEN54-206ENST00000579449 MAGI2Q86UL8 1455 aa20.57■□□□□ 0.88
TSEN54-206ENST00000579449 ERBINQ96RT1 1412 aa20.57■□□□□ 0.88
TSEN54-206ENST00000579449 DIP2CQ9Y2E4 1556 aa20.57■□□□□ 0.88
TSEN54-206ENST00000579449 YEATS2Q9ULM3 1422 aa20.56■□□□□ 0.88
TSEN54-206ENST00000579449 DHX29Q7Z478 1369 aaKnown RBP20.56■□□□□ 0.88
TSEN54-206ENST00000579449 A2MP01023 1474 aa20.55■□□□□ 0.88
TSEN54-206ENST00000579449 TRIM52Q96A61 297 aa20.54■□□□□ 0.88
TSEN54-206ENST00000579449 ACIN1Q9UKV3 1341 aaKnown RBP20.53■□□□□ 0.88
TSEN54-206ENST00000579449 DHX57Q6P158 1386 aaKnown RBP20.52■□□□□ 0.88
TSEN54-206ENST00000579449 CCER1Q8TC90 406 aaPredicted RBP20.51■□□□□ 0.87
TSEN54-206ENST00000579449 EIF2AK4Q9P2K8 1649 aaKnown RBP20.51■□□□□ 0.87
TSEN54-206ENST00000579449 ATP10AO60312 1499 aa20.5■□□□□ 0.87
TSEN54-206ENST00000579449 ARHGEF40Q8TER5 1519 aa20.49■□□□□ 0.87
TSEN54-206ENST00000579449 UNC13BO14795 1591 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms