RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 GPATCH8Q9UKJ3 1502 aaKnown RBP15.8■□□□□ 0.12
MKS1-208ENST00000579358 ADGRL1O94910 1474 aa15.8■□□□□ 0.12
MKS1-208ENST00000579358 CCNB3Q8WWL7 1395 aa15.8■□□□□ 0.12
MKS1-208ENST00000579358 AEBP2Q6ZN18 517 aaPredicted RBP15.8■□□□□ 0.12
MKS1-208ENST00000579358 APLP2Q06481 763 aa15.78■□□□□ 0.12
MKS1-208ENST00000579358 NCOA2Q15596 1464 aa15.78■□□□□ 0.12
MKS1-208ENST00000579358 SCAPERQ9BY12 1400 aa15.77■□□□□ 0.12
MKS1-208ENST00000579358 FRMPD1Q5SYB0 1578 aa15.77■□□□□ 0.11
MKS1-208ENST00000579358 POGZQ7Z3K3 1410 aa15.77■□□□□ 0.11
MKS1-208ENST00000579358 RAPGEF3O95398 923 aa15.76■□□□□ 0.11
MKS1-208ENST00000579358 SUPT6HQ7KZ85 1726 aaKnown RBP15.76■□□□□ 0.11
MKS1-208ENST00000579358 CDC42BPBQ9Y5S2 1711 aa15.75■□□□□ 0.11
MKS1-208ENST00000579358 KANK4Q5T7N3 995 aaPredicted RBP15.75■□□□□ 0.11
MKS1-208ENST00000579358 CDC42BPAQ5VT25 1732 aa15.74■□□□□ 0.11
MKS1-208ENST00000579358 ABCC1P33527 1531 aa15.74■□□□□ 0.11
MKS1-208ENST00000579358 CFDP1Q9UEE9 299 aaPredicted RBP15.74■□□□□ 0.11
MKS1-208ENST00000579358 ZMYM4Q5VZL5 1548 aa15.73■□□□□ 0.11
MKS1-208ENST00000579358 ZNF518AQ6AHZ1 1483 aa15.73■□□□□ 0.11
MKS1-208ENST00000579358 PLEKHH2Q8IVE3 1493 aa15.72■□□□□ 0.11
MKS1-208ENST00000579358 RICTORQ6R327 1708 aa15.72■□□□□ 0.11
MKS1-208ENST00000579358 ITSN2Q9NZM3 1697 aa15.72■□□□□ 0.11
MKS1-208ENST00000579358 MAGI2Q86UL8 1455 aa15.71■□□□□ 0.11
MKS1-208ENST00000579358 KIAA1107Q9UPP5 1409 aa15.71■□□□□ 0.11
MKS1-208ENST00000579358 SAMD9LQ8IVG5 1584 aa15.7■□□□□ 0.1
MKS1-208ENST00000579358 ARHGEF12Q9NZN5 1544 aa15.69■□□□□ 0.1
MKS1-208ENST00000579358 ZNF777Q9ULD5 760 aaPredicted RBP15.69■□□□□ 0.1
MKS1-208ENST00000579358 KDM5CP41229 1560 aa15.69■□□□□ 0.1
MKS1-208ENST00000579358 ARHGEF40Q8TER5 1519 aa15.68■□□□□ 0.1
MKS1-208ENST00000579358 SYCP2Q9BX26 1530 aa15.67■□□□□ 0.1
MKS1-208ENST00000579358 MYOM3Q5VTT5 1437 aa15.67■□□□□ 0.1
MKS1-208ENST00000579358 MIA2Q96PC5 1412 aa15.67■□□□□ 0.1
MKS1-208ENST00000579358 TRAPPC8Q9Y2L5 1435 aa15.67■□□□□ 0.1
MKS1-208ENST00000579358 ZFYVE16Q7Z3T8 1539 aa15.66■□□□□ 0.1
MKS1-208ENST00000579358 AFAP1Q8N556 730 aa15.65■□□□□ 0.1
MKS1-208ENST00000579358 MLH3Q9UHC1 1453 aa15.65■□□□□ 0.1
MKS1-208ENST00000579358 YEATS2Q9ULM3 1422 aa15.64■□□□□ 0.09
MKS1-208ENST00000579358 CAMSAP2Q08AD1 1489 aa15.64■□□□□ 0.09
MKS1-208ENST00000579358 MBD5Q9P267 1494 aa15.63■□□□□ 0.09
MKS1-208ENST00000579358 ZNF644Q9H582 1327 aaPredicted RBP15.63■□□□□ 0.09
MKS1-208ENST00000579358 HECW2Q9P2P5 1572 aa15.62■□□□□ 0.09
MKS1-208ENST00000579358 HNRNPMP52272 730 aaKnown RBP eCLIP15.62■□□□□ 0.09
MKS1-208ENST00000579358 RSPH4AQ5TD94 716 aa15.6■□□□□ 0.09
MKS1-208ENST00000579358 C9orf84Q5VXU9 1444 aa15.6■□□□□ 0.09
MKS1-208ENST00000579358 ATP10AO60312 1499 aa15.59■□□□□ 0.09
MKS1-208ENST00000579358 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
MKS1-208ENST00000579358 SPAG9O60271 1321 aaKnown RBP15.58■□□□□ 0.08
MKS1-208ENST00000579358 FGD6Q6ZV73 1430 aa15.58■□□□□ 0.08
MKS1-208ENST00000579358 ARHGEF5Q12774 1597 aa15.57■□□□□ 0.08
MKS1-208ENST00000579358 DIP2CQ9Y2E4 1556 aa15.57■□□□□ 0.08
MKS1-208ENST00000579358 KDM4FA0A1W2PPD8 638 aa15.56■□□□□ 0.08
MKS1-208ENST00000579358 MYT1LQ9UL68 1186 aa15.56■□□□□ 0.08
MKS1-208ENST00000579358 RTEL1-TNFRSF6BF6WH68 1400 aa15.56■□□□□ 0.08
MKS1-208ENST00000579358 TCOF1Q13428 1488 aaKnown RBP15.56■□□□□ 0.08
MKS1-208ENST00000579358 ATP7AQ04656 1500 aa15.56■□□□□ 0.08
MKS1-208ENST00000579358 REREQ9P2R6 1566 aa15.56■□□□□ 0.08
MKS1-208ENST00000579358 INO80Q9ULG1 1556 aaPredicted RBP15.56■□□□□ 0.08
MKS1-208ENST00000579358 ABCA6Q8N139 1617 aa15.54■□□□□ 0.08
MKS1-208ENST00000579358 KIDINS220Q9ULH0 1771 aa15.54■□□□□ 0.08
MKS1-208ENST00000579358 ARID4BQ4LE39 1312 aaPredicted RBP15.53■□□□□ 0.08
MKS1-208ENST00000579358 PTPN23Q9H3S7 1636 aa15.53■□□□□ 0.08
MKS1-208ENST00000579358 AGLP35573 1532 aa15.52■□□□□ 0.07
MKS1-208ENST00000579358 TSPY4P0CV99 314 aa15.5■□□□□ 0.07
MKS1-208ENST00000579358 TSPY10P0CW01 314 aa15.5■□□□□ 0.07
MKS1-208ENST00000579358 MAST1Q9Y2H9 1570 aa15.49■□□□□ 0.07
MKS1-208ENST00000579358 BCORL1Q5H9F3 1711 aa15.49■□□□□ 0.07
MKS1-208ENST00000579358 SHANK2Q9UPX8 1470 aa15.49■□□□□ 0.07
MKS1-208ENST00000579358 SIGLEC1Q9BZZ2 1709 aa15.48■□□□□ 0.07
MKS1-208ENST00000579358 A2MP01023 1474 aa15.48■□□□□ 0.07
MKS1-208ENST00000579358 PLXNC1O60486 1568 aa15.48■□□□□ 0.07
MKS1-208ENST00000579358 ADAMTSL3P82987 1691 aa15.48■□□□□ 0.07
MKS1-208ENST00000579358 ABCC5O15440 1437 aa15.47■□□□□ 0.07
MKS1-208ENST00000579358 DAPK1P53355 1430 aa15.46■□□□□ 0.07
MKS1-208ENST00000579358 DNMT1P26358 1616 aaKnown RBP15.45■□□□□ 0.06
MKS1-208ENST00000579358 DHX29Q7Z478 1369 aaKnown RBP15.45■□□□□ 0.06
MKS1-208ENST00000579358 PPARGC1BQ86YN6 1023 aaKnown RBP15.44■□□□□ 0.06
MKS1-208ENST00000579358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.44■□□□□ 0.06
MKS1-208ENST00000579358 ADGBQ8N7X0 1667 aa15.44■□□□□ 0.06
MKS1-208ENST00000579358 FAM50AQ14320 339 aaKnown RBP15.43■□□□□ 0.06
MKS1-208ENST00000579358 CROCC2H7BZ55 1655 aa15.42■□□□□ 0.06
MKS1-208ENST00000579358 MADDQ8WXG6 1647 aa15.42■□□□□ 0.06
MKS1-208ENST00000579358 MLECQ14165 292 aa15.41■□□□□ 0.06
MKS1-208ENST00000579358 RRBP1Q9P2E9 1410 aaKnown RBP15.41■□□□□ 0.06
MKS1-208ENST00000579358 PTPRMP28827 1452 aa15.4■□□□□ 0.06
MKS1-208ENST00000579358 ADGRL2O95490 1459 aa15.39■□□□□ 0.05
MKS1-208ENST00000579358 ANKRD30AQ9BXX3 1397 aa15.38■□□□□ 0.05
MKS1-208ENST00000579358 KIF15Q9NS87 1388 aa15.38■□□□□ 0.05
MKS1-208ENST00000579358 DUOX2Q9NRD8 1548 aa15.38■□□□□ 0.05
MKS1-208ENST00000579358 CNTLNQ9NXG0 1405 aa15.37■□□□□ 0.05
MKS1-208ENST00000579358 PPP6R1Q9UPN7 881 aa15.37■□□□□ 0.05
MKS1-208ENST00000579358 NCOA1Q15788 1441 aa15.36■□□□□ 0.05
MKS1-208ENST00000579358 ERBINQ96RT1 1412 aa15.35■□□□□ 0.05
MKS1-208ENST00000579358 RIMS1Q86UR5 1692 aaKnown RBP15.35■□□□□ 0.05
MKS1-208ENST00000579358 FAM135AQ9P2D6 1515 aa15.35■□□□□ 0.05
MKS1-208ENST00000579358 FER1L4A9Z1Z3 1794 aa15.34■□□□□ 0.05
MKS1-208ENST00000579358 KIF3BO15066 747 aa15.34■□□□□ 0.05
MKS1-208ENST00000579358 ESF1Q9H501 851 aaKnown RBP15.34■□□□□ 0.05
MKS1-208ENST00000579358 EIF2AK4Q9P2K8 1649 aaKnown RBP15.34■□□□□ 0.05
MKS1-208ENST00000579358 PTPRKQ15262 1439 aa15.34■□□□□ 0.05
MKS1-208ENST00000579358 GGT6Q6P531 493 aa15.33■□□□□ 0.04
MKS1-208ENST00000579358 RRP7BPQ9NSQ0 103 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms