RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 ADGRL1O94910 1474 aa27.7■■■□□ 2.02
ITGB4-205ENST00000579211 PREX2Q70Z35 1606 aa27.69■■■□□ 2.02
ITGB4-205ENST00000579211 FRMPD1Q5SYB0 1578 aa27.65■■■□□ 2.02
ITGB4-205ENST00000579211 SCAPERQ9BY12 1400 aa27.65■■■□□ 2.02
ITGB4-205ENST00000579211 EHBP1L1Q8N3D4 1523 aa27.63■■■□□ 2.01
ITGB4-205ENST00000579211 TIAM1Q13009 1591 aa27.6■■■□□ 2.01
ITGB4-205ENST00000579211 SUPT6HQ7KZ85 1726 aaKnown RBP27.59■■■□□ 2.01
ITGB4-205ENST00000579211 ZNF777Q9ULD5 760 aaPredicted RBP27.59■■■□□ 2.01
ITGB4-205ENST00000579211 CCNB3Q8WWL7 1395 aa27.59■■■□□ 2.01
ITGB4-205ENST00000579211 APLP2Q06481 763 aa27.58■■■□□ 2.01
ITGB4-205ENST00000579211 MYT1LQ9UL68 1186 aa27.57■■■□□ 2
ITGB4-205ENST00000579211 ITSN2Q9NZM3 1697 aa27.56■■■□□ 2
ITGB4-205ENST00000579211 KDM4FA0A1W2PPD8 638 aa27.56■■■□□ 2
ITGB4-205ENST00000579211 POGZQ7Z3K3 1410 aa27.55■■■□□ 2
ITGB4-205ENST00000579211 GPATCH8Q9UKJ3 1502 aaKnown RBP27.53■■■□□ 2
ITGB4-205ENST00000579211 ZMYM4Q5VZL5 1548 aa27.52■■■□□ 2
ITGB4-205ENST00000579211 CFDP1Q9UEE9 299 aaPredicted RBP27.52■■■□□ 2
ITGB4-205ENST00000579211 ZFYVE16Q7Z3T8 1539 aa27.51■■■□□ 2
ITGB4-205ENST00000579211 ARID4BQ4LE39 1312 aaPredicted RBP27.51■■□□□ 1.99
ITGB4-205ENST00000579211 ARHGEF40Q8TER5 1519 aa27.51■■□□□ 1.99
ITGB4-205ENST00000579211 ZNF518AQ6AHZ1 1483 aa27.51■■□□□ 1.99
ITGB4-205ENST00000579211 ABCC1P33527 1531 aa27.49■■□□□ 1.99
ITGB4-205ENST00000579211 MAGI2Q86UL8 1455 aa27.49■■□□□ 1.99
ITGB4-205ENST00000579211 AFAP1Q8N556 730 aa27.47■■□□□ 1.99
ITGB4-205ENST00000579211 SAMD9LQ8IVG5 1584 aa27.47■■□□□ 1.99
ITGB4-205ENST00000579211 MAP3K1Q13233 1512 aa27.46■■□□□ 1.99
ITGB4-205ENST00000579211 LRRC9Q6ZRR7 1453 aa27.45■■□□□ 1.99
ITGB4-205ENST00000579211 NCOA2Q15596 1464 aa27.44■■□□□ 1.98
ITGB4-205ENST00000579211 HECW2Q9P2P5 1572 aa27.43■■□□□ 1.98
ITGB4-205ENST00000579211 YEATS2Q9ULM3 1422 aa27.42■■□□□ 1.98
ITGB4-205ENST00000579211 KDM5CP41229 1560 aa27.41■■□□□ 1.98
ITGB4-205ENST00000579211 PLEKHH2Q8IVE3 1493 aa27.41■■□□□ 1.98
ITGB4-205ENST00000579211 SYCP2Q9BX26 1530 aa27.41■■□□□ 1.98
ITGB4-205ENST00000579211 ARHGEF12Q9NZN5 1544 aa27.41■■□□□ 1.98
ITGB4-205ENST00000579211 HNRNPMP52272 730 aaKnown RBP eCLIP27.4■■□□□ 1.98
ITGB4-205ENST00000579211 TRAPPC8Q9Y2L5 1435 aa27.39■■□□□ 1.97
ITGB4-205ENST00000579211 BCORL1Q5H9F3 1711 aa27.38■■□□□ 1.97
ITGB4-205ENST00000579211 KANK4Q5T7N3 995 aaPredicted RBP27.38■■□□□ 1.97
ITGB4-205ENST00000579211 ATP10AO60312 1499 aa27.36■■□□□ 1.97
ITGB4-205ENST00000579211 KIAA1107Q9UPP5 1409 aa27.33■■□□□ 1.97
ITGB4-205ENST00000579211 ADAMTSL3P82987 1691 aa27.33■■□□□ 1.97
ITGB4-205ENST00000579211 MLH3Q9UHC1 1453 aa27.32■■□□□ 1.96
ITGB4-205ENST00000579211 KIDINS220Q9ULH0 1771 aa27.32■■□□□ 1.96
ITGB4-205ENST00000579211 C9orf84Q5VXU9 1444 aa27.32■■□□□ 1.96
ITGB4-205ENST00000579211 SIGLEC1Q9BZZ2 1709 aa27.31■■□□□ 1.96
ITGB4-205ENST00000579211 ZNF644Q9H582 1327 aaPredicted RBP27.31■■□□□ 1.96
ITGB4-205ENST00000579211 ABCA6Q8N139 1617 aa27.3■■□□□ 1.96
ITGB4-205ENST00000579211 MLECQ14165 292 aa27.3■■□□□ 1.96
ITGB4-205ENST00000579211 SPAG9O60271 1321 aaKnown RBP27.3■■□□□ 1.96
ITGB4-205ENST00000579211 DIP2CQ9Y2E4 1556 aa27.3■■□□□ 1.96
ITGB4-205ENST00000579211 MADDQ8WXG6 1647 aa27.27■■□□□ 1.96
ITGB4-205ENST00000579211 CAMSAP2Q08AD1 1489 aa27.26■■□□□ 1.95
ITGB4-205ENST00000579211 RIMS1Q86UR5 1692 aaKnown RBP27.26■■□□□ 1.95
ITGB4-205ENST00000579211 FER1L4A9Z1Z3 1794 aa27.25■■□□□ 1.95
ITGB4-205ENST00000579211 ATP7AQ04656 1500 aa27.23■■□□□ 1.95
ITGB4-205ENST00000579211 MYOM3Q5VTT5 1437 aa27.21■■□□□ 1.95
ITGB4-205ENST00000579211 RSPH4AQ5TD94 716 aa27.2■■□□□ 1.94
ITGB4-205ENST00000579211 REREQ9P2R6 1566 aa27.2■■□□□ 1.94
ITGB4-205ENST00000579211 INO80Q9ULG1 1556 aaPredicted RBP27.2■■□□□ 1.94
ITGB4-205ENST00000579211 ADGBQ8N7X0 1667 aa27.18■■□□□ 1.94
ITGB4-205ENST00000579211 MBD5Q9P267 1494 aa27.18■■□□□ 1.94
ITGB4-205ENST00000579211 PTPRMP28827 1452 aa27.17■■□□□ 1.94
ITGB4-205ENST00000579211 CCDC141Q6ZP82 1450 aa27.17■■□□□ 1.94
ITGB4-205ENST00000579211 MIA2Q96PC5 1412 aa27.16■■□□□ 1.94
ITGB4-205ENST00000579211 PLPPR3Q6T4P5 718 aa27.16■■□□□ 1.94
ITGB4-205ENST00000579211 TSPY4P0CV99 314 aa27.15■■□□□ 1.94
ITGB4-205ENST00000579211 TSPY10P0CW01 314 aa27.15■■□□□ 1.94
ITGB4-205ENST00000579211 ARHGEF5Q12774 1597 aa27.14■■□□□ 1.93
ITGB4-205ENST00000579211 ESF1Q9H501 851 aaKnown RBP27.13■■□□□ 1.93
ITGB4-205ENST00000579211 PTPN23Q9H3S7 1636 aa27.12■■□□□ 1.93
ITGB4-205ENST00000579211 AGLP35573 1532 aa27.11■■□□□ 1.93
ITGB4-205ENST00000579211 RTEL1-TNFRSF6BF6WH68 1400 aa27.09■■□□□ 1.93
ITGB4-205ENST00000579211 A2MP01023 1474 aa27.09■■□□□ 1.93
ITGB4-205ENST00000579211 FGD6Q6ZV73 1430 aa27.03■■□□□ 1.92
ITGB4-205ENST00000579211 PLXNC1O60486 1568 aa27.01■■□□□ 1.92
ITGB4-205ENST00000579211 PPARGC1BQ86YN6 1023 aaKnown RBP27■■□□□ 1.91
ITGB4-205ENST00000579211 CROCC2H7BZ55 1655 aa26.99■■□□□ 1.91
ITGB4-205ENST00000579211 MAST1Q9Y2H9 1570 aa26.99■■□□□ 1.91
ITGB4-205ENST00000579211 GGT6Q6P531 493 aa26.98■■□□□ 1.91
ITGB4-205ENST00000579211 DHX29Q7Z478 1369 aaKnown RBP26.97■■□□□ 1.91
ITGB4-205ENST00000579211 C3P01024 1663 aa26.95■■□□□ 1.91
ITGB4-205ENST00000579211 CLTCQ00610 1675 aaKnown RBP26.95■■□□□ 1.91
ITGB4-205ENST00000579211 FAM50AQ14320 339 aaKnown RBP26.95■■□□□ 1.9
ITGB4-205ENST00000579211 DNMT1P26358 1616 aaKnown RBP26.94■■□□□ 1.9
ITGB4-205ENST00000579211 TCOF1Q13428 1488 aaKnown RBP26.94■■□□□ 1.9
ITGB4-205ENST00000579211 SETD1BQ9UPS6 1966 aaKnown RBP26.94■■□□□ 1.9
ITGB4-205ENST00000579211 CEBPAP49715 358 aaPredicted RBP26.93■■□□□ 1.9
ITGB4-205ENST00000579211 CNTLNQ9NXG0 1405 aa26.92■■□□□ 1.9
ITGB4-205ENST00000579211 KIF3BO15066 747 aa26.92■■□□□ 1.9
ITGB4-205ENST00000579211 MROH2AA6NES4 1674 aa26.91■■□□□ 1.9
ITGB4-205ENST00000579211 DAPK1P53355 1430 aa26.9■■□□□ 1.9
ITGB4-205ENST00000579211 ABCC5O15440 1437 aa26.89■■□□□ 1.89
ITGB4-205ENST00000579211 PREX1Q8TCU6 1659 aa26.88■■□□□ 1.89
ITGB4-205ENST00000579211 SHANK2Q9UPX8 1470 aa26.87■■□□□ 1.89
ITGB4-205ENST00000579211 CHIC2Q9UKJ5 165 aa26.86■■□□□ 1.89
ITGB4-205ENST00000579211 PPP6R1Q9UPN7 881 aa26.85■■□□□ 1.89
ITGB4-205ENST00000579211 RRP7BPQ9NSQ0 103 aa26.83■■□□□ 1.89
ITGB4-205ENST00000579211 DUOX2Q9NRD8 1548 aa26.83■■□□□ 1.89
ITGB4-205ENST00000579211 EIF2AK4Q9P2K8 1649 aaKnown RBP26.83■■□□□ 1.88
ITGB4-205ENST00000579211 ZMYM3Q14202 1370 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms