RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 LMTK3Q96Q04 1460 aa31.78■■■□□ 2.68
CDKN2A-213ENST00000579122 CDK11AQ9UQ88 783 aaPredicted RBP31.77■■■□□ 2.68
CDKN2A-213ENST00000579122 CHIC1Q5VXU3 224 aa31.74■■■□□ 2.67
CDKN2A-213ENST00000579122 SIGLEC1Q9BZZ2 1709 aa31.73■■■□□ 2.67
CDKN2A-213ENST00000579122 EFCAB2Q5VUJ9 269 aa31.73■■■□□ 2.67
CDKN2A-213ENST00000579122 MYO5CQ9NQX4 1742 aa31.71■■■□□ 2.67
CDKN2A-213ENST00000579122 FBXO41Q8TF61 875 aa31.68■■■□□ 2.66
CDKN2A-213ENST00000579122 TROQ12816 1431 aaPredicted RBP31.67■■■□□ 2.66
CDKN2A-213ENST00000579122 KIF14Q15058 1648 aa31.67■■■□□ 2.66
CDKN2A-213ENST00000579122 ATP10AO60312 1499 aa31.65■■■□□ 2.66
CDKN2A-213ENST00000579122 MLECQ14165 292 aa31.63■■■□□ 2.65
CDKN2A-213ENST00000579122 CLIP1P30622 1438 aa31.63■■■□□ 2.65
CDKN2A-213ENST00000579122 C9orf84Q5VXU9 1444 aa31.61■■■□□ 2.65
CDKN2A-213ENST00000579122 PLPPR3Q6T4P5 718 aa31.6■■■□□ 2.65
CDKN2A-213ENST00000579122 FER1L4A9Z1Z3 1794 aa31.6■■■□□ 2.65
CDKN2A-213ENST00000579122 ZNF518AQ6AHZ1 1483 aa31.59■■■□□ 2.65
CDKN2A-213ENST00000579122 ARHGAP5Q13017 1502 aa31.59■■■□□ 2.65
CDKN2A-213ENST00000579122 ARHGEF12Q9NZN5 1544 aa31.58■■■□□ 2.65
CDKN2A-213ENST00000579122 LRRIQ1Q96JM4 1722 aa31.57■■■□□ 2.64
CDKN2A-213ENST00000579122 HSPA2P54652 639 aa31.56■■■□□ 2.64
CDKN2A-213ENST00000579122 KDM5CP41229 1560 aa31.55■■■□□ 2.64
CDKN2A-213ENST00000579122 AFAP1Q8N556 730 aa31.51■■■□□ 2.63
CDKN2A-213ENST00000579122 CASKIN1Q8WXD9 1431 aa31.5■■■□□ 2.63
CDKN2A-213ENST00000579122 CCDC18Q5T9S5 1454 aa31.5■■■□□ 2.63
CDKN2A-213ENST00000579122 CDC42BPBQ9Y5S2 1711 aa31.46■■■□□ 2.63
CDKN2A-213ENST00000579122 REREQ9P2R6 1566 aa31.43■■■□□ 2.62
CDKN2A-213ENST00000579122 DIP2CQ9Y2E4 1556 aa31.43■■■□□ 2.62
CDKN2A-213ENST00000579122 PREX2Q70Z35 1606 aa31.43■■■□□ 2.62
CDKN2A-213ENST00000579122 MYT1LQ9UL68 1186 aa31.43■■■□□ 2.62
CDKN2A-213ENST00000579122 MLH3Q9UHC1 1453 aa31.43■■■□□ 2.62
CDKN2A-213ENST00000579122 PREX1Q8TCU6 1659 aa31.4■■■□□ 2.62
CDKN2A-213ENST00000579122 ABCC1P33527 1531 aa31.39■■■□□ 2.62
CDKN2A-213ENST00000579122 CEBPAP49715 358 aaPredicted RBP31.38■■■□□ 2.61
CDKN2A-213ENST00000579122 TRAPPC8Q9Y2L5 1435 aa31.37■■■□□ 2.61
CDKN2A-213ENST00000579122 ABCA6Q8N139 1617 aa31.37■■■□□ 2.61
CDKN2A-213ENST00000579122 FYCO1Q9BQS8 1478 aa31.36■■■□□ 2.61
CDKN2A-213ENST00000579122 ITSN2Q9NZM3 1697 aa31.34■■■□□ 2.61
CDKN2A-213ENST00000579122 AGLP35573 1532 aa31.33■■■□□ 2.61
CDKN2A-213ENST00000579122 CDC42BPAQ5VT25 1732 aa31.3■■■□□ 2.6
CDKN2A-213ENST00000579122 UHRF1BP1Q6BDS2 1440 aa31.28■■■□□ 2.6
CDKN2A-213ENST00000579122 CERKQ8TCT0 537 aa31.28■■■□□ 2.6
CDKN2A-213ENST00000579122 KIDINS220Q9ULH0 1771 aa31.25■■■□□ 2.59
CDKN2A-213ENST00000579122 SETD1BQ9UPS6 1966 aaKnown RBP31.24■■■□□ 2.59
CDKN2A-213ENST00000579122 ESF1Q9H501 851 aaKnown RBP31.23■■■□□ 2.59
CDKN2A-213ENST00000579122 DMRT2Q9Y5R5 561 aa31.22■■■□□ 2.59
CDKN2A-213ENST00000579122 C3P01024 1663 aa31.22■■■□□ 2.59
CDKN2A-213ENST00000579122 GPATCH8Q9UKJ3 1502 aaKnown RBP31.21■■■□□ 2.59
CDKN2A-213ENST00000579122 SAMD9LQ8IVG5 1584 aa31.21■■■□□ 2.59
CDKN2A-213ENST00000579122 ZNF777Q9ULD5 760 aaPredicted RBP31.19■■■□□ 2.58
CDKN2A-213ENST00000579122 STRCQ7RTU9 1775 aa31.19■■■□□ 2.58
CDKN2A-213ENST00000579122 CNTLNQ9NXG0 1405 aa31.17■■■□□ 2.58
CDKN2A-213ENST00000579122 SYCP2Q9BX26 1530 aa31.16■■■□□ 2.58
CDKN2A-213ENST00000579122 SPAG9O60271 1321 aaKnown RBP31.13■■■□□ 2.57
CDKN2A-213ENST00000579122 HNRNPMP52272 730 aaKnown RBP eCLIP31.12■■■□□ 2.57
CDKN2A-213ENST00000579122 KIAA1107Q9UPP5 1409 aa31.12■■■□□ 2.57
CDKN2A-213ENST00000579122 PLEKHH2Q8IVE3 1493 aa31.11■■■□□ 2.57
CDKN2A-213ENST00000579122 CFDP1Q9UEE9 299 aaPredicted RBP31.1■■■□□ 2.57
CDKN2A-213ENST00000579122 CCNB3Q8WWL7 1395 aa31.08■■■□□ 2.57
CDKN2A-213ENST00000579122 PTPRTO14522 1441 aa31.07■■■□□ 2.57
CDKN2A-213ENST00000579122 ATP7AQ04656 1500 aa31.06■■■□□ 2.56
CDKN2A-213ENST00000579122 MROH2AA6NES4 1674 aa31.06■■■□□ 2.56
CDKN2A-213ENST00000579122 MTUS2Q5JR59 1369 aa31.05■■■□□ 2.56
CDKN2A-213ENST00000579122 NPATQ14207 1427 aa31.04■■■□□ 2.56
CDKN2A-213ENST00000579122 INO80Q9ULG1 1556 aaPredicted RBP31.04■■■□□ 2.56
CDKN2A-213ENST00000579122 SUPT6HQ7KZ85 1726 aaKnown RBP31.01■■■□□ 2.56
CDKN2A-213ENST00000579122 PLXNC1O60486 1568 aa31.01■■■□□ 2.56
CDKN2A-213ENST00000579122 ZMYM3Q14202 1370 aa31.01■■■□□ 2.55
CDKN2A-213ENST00000579122 A2MP01023 1474 aa31■■■□□ 2.55
CDKN2A-213ENST00000579122 NCOA1Q15788 1441 aa30.98■■■□□ 2.55
CDKN2A-213ENST00000579122 EHBP1L1Q8N3D4 1523 aa30.95■■■□□ 2.55
CDKN2A-213ENST00000579122 TIAM1Q13009 1591 aa30.94■■■□□ 2.54
CDKN2A-213ENST00000579122 CLTCQ00610 1675 aaKnown RBP30.92■■■□□ 2.54
CDKN2A-213ENST00000579122 CAMSAP1Q5T5Y3 1602 aa30.91■■■□□ 2.54
CDKN2A-213ENST00000579122 ZNF644Q9H582 1327 aaPredicted RBP30.9■■■□□ 2.54
CDKN2A-213ENST00000579122 ADGBQ8N7X0 1667 aa30.9■■■□□ 2.54
CDKN2A-213ENST00000579122 CEP162Q5TB80 1403 aa30.9■■■□□ 2.54
CDKN2A-213ENST00000579122 MBD5Q9P267 1494 aa30.89■■■□□ 2.54
CDKN2A-213ENST00000579122 PPP6R1Q9UPN7 881 aa30.89■■■□□ 2.54
CDKN2A-213ENST00000579122 LTBP4Q8N2S1 1624 aa30.88■■■□□ 2.53
CDKN2A-213ENST00000579122 GGT6Q6P531 493 aa30.88■■■□□ 2.53
CDKN2A-213ENST00000579122 RTEL1-TNFRSF6BF6WH68 1400 aa30.86■■■□□ 2.53
CDKN2A-213ENST00000579122 PTPRKQ15262 1439 aa30.86■■■□□ 2.53
CDKN2A-213ENST00000579122 IQSEC2Q5JU85 1478 aa30.83■■■□□ 2.53
CDKN2A-213ENST00000579122 ZNF142P52746 1687 aaPredicted RBP30.83■■■□□ 2.53
CDKN2A-213ENST00000579122 MYO3AQ8NEV4 1616 aa30.83■■■□□ 2.53
CDKN2A-213ENST00000579122 PLA2R1Q13018 1463 aa30.8■■■□□ 2.52
CDKN2A-213ENST00000579122 CEP170BQ9Y4F5 1589 aaPredicted RBP30.79■■■□□ 2.52
CDKN2A-213ENST00000579122 DHX29Q7Z478 1369 aaKnown RBP30.79■■■□□ 2.52
CDKN2A-213ENST00000579122 NCKAP5LQ9HCH0 1330 aa30.78■■■□□ 2.52
CDKN2A-213ENST00000579122 PKD2Q13563 968 aa30.76■■■□□ 2.51
CDKN2A-213ENST00000579122 NCOA2Q15596 1464 aa30.75■■■□□ 2.51
CDKN2A-213ENST00000579122 TCOF1Q13428 1488 aaKnown RBP30.74■■■□□ 2.51
CDKN2A-213ENST00000579122 CCDC141Q6ZP82 1450 aa30.74■■■□□ 2.51
CDKN2A-213ENST00000579122 RSPH4AQ5TD94 716 aa30.73■■■□□ 2.51
CDKN2A-213ENST00000579122 CAMSAP2Q08AD1 1489 aa30.72■■■□□ 2.51
CDKN2A-213ENST00000579122 A2ML1A8K2U0 1454 aa30.69■■■□□ 2.5
CDKN2A-213ENST00000579122 ZNF335Q9H4Z2 1342 aaPredicted RBP30.68■■■□□ 2.5
CDKN2A-213ENST00000579122 FAM135AQ9P2D6 1515 aa30.68■■■□□ 2.5
CDKN2A-213ENST00000579122 DISP3Q9P2K9 1392 aa30.67■■■□□ 2.5
CDKN2A-213ENST00000579122 KIF3BO15066 747 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms