RNA–Protein interactions for RNA: ENST00000578576.1

HS3ST3A1-202, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3A1, humanhuman

TSL 3 BASIC

Gene HS3ST3A1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1-202ENST00000578576 MADDQ8WXG6 1647 aa22.86■■□□□ 1.25
HS3ST3A1-202ENST00000578576 LOC105371045A0A1W2PR82 267 aa22.86■■□□□ 1.25
HS3ST3A1-202ENST00000578576 EFCAB2Q5VUJ9 269 aa22.86■■□□□ 1.25
HS3ST3A1-202ENST00000578576 SCAPERQ9BY12 1400 aa22.85■■□□□ 1.25
HS3ST3A1-202ENST00000578576 ARID4BQ4LE39 1312 aaPredicted RBP22.84■■□□□ 1.25
HS3ST3A1-202ENST00000578576 CCDC18Q5T9S5 1454 aa22.83■■□□□ 1.25
HS3ST3A1-202ENST00000578576 FYCO1Q9BQS8 1478 aa22.81■■□□□ 1.24
HS3ST3A1-202ENST00000578576 ARHGAP5Q13017 1502 aa22.79■■□□□ 1.24
HS3ST3A1-202ENST00000578576 YEATS2Q9ULM3 1422 aa22.79■■□□□ 1.24
HS3ST3A1-202ENST00000578576 CDC42BPBQ9Y5S2 1711 aa22.79■■□□□ 1.24
HS3ST3A1-202ENST00000578576 ARHGEF40Q8TER5 1519 aa22.77■■□□□ 1.24
HS3ST3A1-202ENST00000578576 CEP162Q5TB80 1403 aa22.76■■□□□ 1.23
HS3ST3A1-202ENST00000578576 AFAP1Q8N556 730 aa22.76■■□□□ 1.23
HS3ST3A1-202ENST00000578576 POGZQ7Z3K3 1410 aa22.75■■□□□ 1.23
HS3ST3A1-202ENST00000578576 RIMS1Q86UR5 1692 aaKnown RBP22.74■■□□□ 1.23
HS3ST3A1-202ENST00000578576 ZMYM4Q5VZL5 1548 aa22.74■■□□□ 1.23
HS3ST3A1-202ENST00000578576 ZFYVE16Q7Z3T8 1539 aa22.74■■□□□ 1.23
HS3ST3A1-202ENST00000578576 SIGLEC1Q9BZZ2 1709 aa22.74■■□□□ 1.23
HS3ST3A1-202ENST00000578576 CDC42BPAQ5VT25 1732 aa22.71■■□□□ 1.23
HS3ST3A1-202ENST00000578576 MLECQ14165 292 aa22.71■■□□□ 1.23
HS3ST3A1-202ENST00000578576 MYT1LQ9UL68 1186 aa22.71■■□□□ 1.23
HS3ST3A1-202ENST00000578576 ZNF777Q9ULD5 760 aaPredicted RBP22.7■■□□□ 1.22
HS3ST3A1-202ENST00000578576 PREX2Q70Z35 1606 aa22.7■■□□□ 1.22
HS3ST3A1-202ENST00000578576 MAGI2Q86UL8 1455 aa22.68■■□□□ 1.22
HS3ST3A1-202ENST00000578576 PLPPR3Q6T4P5 718 aa22.68■■□□□ 1.22
HS3ST3A1-202ENST00000578576 ARHGEF12Q9NZN5 1544 aa22.67■■□□□ 1.22
HS3ST3A1-202ENST00000578576 TRAPPC8Q9Y2L5 1435 aa22.65■■□□□ 1.22
HS3ST3A1-202ENST00000578576 MTUS2Q5JR59 1369 aa22.64■■□□□ 1.22
HS3ST3A1-202ENST00000578576 ATP10AO60312 1499 aa22.64■■□□□ 1.21
HS3ST3A1-202ENST00000578576 ZNF518AQ6AHZ1 1483 aa22.64■■□□□ 1.21
HS3ST3A1-202ENST00000578576 GPATCH8Q9UKJ3 1502 aaKnown RBP22.63■■□□□ 1.21
HS3ST3A1-202ENST00000578576 HSPA2P54652 639 aa22.62■■□□□ 1.21
HS3ST3A1-202ENST00000578576 HNRNPMP52272 730 aaKnown RBP eCLIP22.61■■□□□ 1.21
HS3ST3A1-202ENST00000578576 ITSN2Q9NZM3 1697 aa22.61■■□□□ 1.21
HS3ST3A1-202ENST00000578576 ABCC1P33527 1531 aa22.61■■□□□ 1.21
HS3ST3A1-202ENST00000578576 KDM5CP41229 1560 aa22.6■■□□□ 1.21
HS3ST3A1-202ENST00000578576 CERKQ8TCT0 537 aa22.6■■□□□ 1.21
HS3ST3A1-202ENST00000578576 CFDP1Q9UEE9 299 aaPredicted RBP22.59■■□□□ 1.21
HS3ST3A1-202ENST00000578576 CCNB3Q8WWL7 1395 aa22.59■■□□□ 1.21
HS3ST3A1-202ENST00000578576 C9orf84Q5VXU9 1444 aa22.58■■□□□ 1.21
HS3ST3A1-202ENST00000578576 SAMD9LQ8IVG5 1584 aa22.58■■□□□ 1.2
HS3ST3A1-202ENST00000578576 DIP2CQ9Y2E4 1556 aa22.55■■□□□ 1.2
HS3ST3A1-202ENST00000578576 ZNF644Q9H582 1327 aaPredicted RBP22.54■■□□□ 1.2
HS3ST3A1-202ENST00000578576 MLH3Q9UHC1 1453 aa22.54■■□□□ 1.2
HS3ST3A1-202ENST00000578576 ABCA6Q8N139 1617 aa22.53■■□□□ 1.2
HS3ST3A1-202ENST00000578576 SYCP2Q9BX26 1530 aa22.53■■□□□ 1.2
HS3ST3A1-202ENST00000578576 ILDR2Q71H61 639 aa22.53■■□□□ 1.2
HS3ST3A1-202ENST00000578576 FER1L4A9Z1Z3 1794 aa22.53■■□□□ 1.2
HS3ST3A1-202ENST00000578576 KIDINS220Q9ULH0 1771 aa22.52■■□□□ 1.2
HS3ST3A1-202ENST00000578576 SOCS7O14512 581 aa22.51■■□□□ 1.19
HS3ST3A1-202ENST00000578576 EHBP1L1Q8N3D4 1523 aa22.51■■□□□ 1.19
HS3ST3A1-202ENST00000578576 DISP3Q9P2K9 1392 aa22.5■■□□□ 1.19
HS3ST3A1-202ENST00000578576 TIAM1Q13009 1591 aa22.5■■□□□ 1.19
HS3ST3A1-202ENST00000578576 CEBPAP49715 358 aaPredicted RBP22.49■■□□□ 1.19
HS3ST3A1-202ENST00000578576 VPS8Q8N3P4 1428 aa22.48■■□□□ 1.19
HS3ST3A1-202ENST00000578576 SPAG9O60271 1321 aaKnown RBP22.48■■□□□ 1.19
HS3ST3A1-202ENST00000578576 PREX1Q8TCU6 1659 aa22.47■■□□□ 1.19
HS3ST3A1-202ENST00000578576 KIAA1107Q9UPP5 1409 aa22.44■■□□□ 1.18
HS3ST3A1-202ENST00000578576 NCOA2Q15596 1464 aa22.43■■□□□ 1.18
HS3ST3A1-202ENST00000578576 KANK4Q5T7N3 995 aaPredicted RBP22.43■■□□□ 1.18
HS3ST3A1-202ENST00000578576 SUPT6HQ7KZ85 1726 aaKnown RBP22.43■■□□□ 1.18
HS3ST3A1-202ENST00000578576 SPATA31D1Q6ZQQ2 1576 aa22.42■■□□□ 1.18
HS3ST3A1-202ENST00000578576 PLEKHH2Q8IVE3 1493 aa22.42■■□□□ 1.18
HS3ST3A1-202ENST00000578576 REREQ9P2R6 1566 aa22.42■■□□□ 1.18
HS3ST3A1-202ENST00000578576 STRCQ7RTU9 1775 aa22.4■■□□□ 1.18
HS3ST3A1-202ENST00000578576 AGLP35573 1532 aa22.38■■□□□ 1.17
HS3ST3A1-202ENST00000578576 ATP7AQ04656 1500 aa22.38■■□□□ 1.17
HS3ST3A1-202ENST00000578576 LRRC9Q6ZRR7 1453 aa22.38■■□□□ 1.17
HS3ST3A1-202ENST00000578576 MBD5Q9P267 1494 aa22.37■■□□□ 1.17
HS3ST3A1-202ENST00000578576 ESF1Q9H501 851 aaKnown RBP22.36■■□□□ 1.17
HS3ST3A1-202ENST00000578576 INO80Q9ULG1 1556 aaPredicted RBP22.35■■□□□ 1.17
HS3ST3A1-202ENST00000578576 CAMSAP2Q08AD1 1489 aa22.32■■□□□ 1.16
HS3ST3A1-202ENST00000578576 C3P01024 1663 aa22.31■■□□□ 1.16
HS3ST3A1-202ENST00000578576 A2MP01023 1474 aa22.31■■□□□ 1.16
HS3ST3A1-202ENST00000578576 GGT6Q6P531 493 aa22.3■■□□□ 1.16
HS3ST3A1-202ENST00000578576 MAP3K1Q13233 1512 aa22.28■■□□□ 1.16
HS3ST3A1-202ENST00000578576 DMRT2Q9Y5R5 561 aa22.28■■□□□ 1.16
HS3ST3A1-202ENST00000578576 APLP2Q06481 763 aa22.27■■□□□ 1.16
HS3ST3A1-202ENST00000578576 UHRF1BP1Q6BDS2 1440 aa22.27■■□□□ 1.16
HS3ST3A1-202ENST00000578576 SETD1BQ9UPS6 1966 aaKnown RBP22.27■■□□□ 1.15
HS3ST3A1-202ENST00000578576 ADGBQ8N7X0 1667 aa22.26■■□□□ 1.15
HS3ST3A1-202ENST00000578576 PLXNC1O60486 1568 aa22.25■■□□□ 1.15
HS3ST3A1-202ENST00000578576 CCDC141Q6ZP82 1450 aa22.25■■□□□ 1.15
HS3ST3A1-202ENST00000578576 RTEL1-TNFRSF6BF6WH68 1400 aa22.23■■□□□ 1.15
HS3ST3A1-202ENST00000578576 PTPRTO14522 1441 aa22.23■■□□□ 1.15
HS3ST3A1-202ENST00000578576 LTBP4Q8N2S1 1624 aa22.23■■□□□ 1.15
HS3ST3A1-202ENST00000578576 CLTCQ00610 1675 aaKnown RBP22.23■■□□□ 1.15
HS3ST3A1-202ENST00000578576 RSPH4AQ5TD94 716 aa22.22■■□□□ 1.15
HS3ST3A1-202ENST00000578576 ZMYM3Q14202 1370 aa22.22■■□□□ 1.15
HS3ST3A1-202ENST00000578576 TSPY4P0CV99 314 aa22.21■■□□□ 1.15
HS3ST3A1-202ENST00000578576 TSPY10P0CW01 314 aa22.21■■□□□ 1.15
HS3ST3A1-202ENST00000578576 DHX29Q7Z478 1369 aaKnown RBP22.21■■□□□ 1.15
HS3ST3A1-202ENST00000578576 CNTLNQ9NXG0 1405 aa22.21■■□□□ 1.15
HS3ST3A1-202ENST00000578576 IQSEC2Q5JU85 1478 aa22.21■■□□□ 1.15
HS3ST3A1-202ENST00000578576 KIF3BO15066 747 aa22.2■■□□□ 1.14
HS3ST3A1-202ENST00000578576 MYOM3Q5VTT5 1437 aa22.2■■□□□ 1.14
HS3ST3A1-202ENST00000578576 ARHGEF5Q12774 1597 aa22.18■■□□□ 1.14
HS3ST3A1-202ENST00000578576 MROH2AA6NES4 1674 aa22.16■■□□□ 1.14
HS3ST3A1-202ENST00000578576 MIA2Q96PC5 1412 aa22.14■■□□□ 1.14
HS3ST3A1-202ENST00000578576 NCOA1Q15788 1441 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms