RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 CDK13Q14004 1512 aaKnown RBP17.57■□□□□ 0.4
TRAPPC8-204ENST00000578252 CDK11AQ9UQ88 783 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC8-204ENST00000578252 MAPKBP1O60336 1514 aa17.52■□□□□ 0.4
TRAPPC8-204ENST00000578252 ARID3CA6NKF2 412 aa17.49■□□□□ 0.39
TRAPPC8-204ENST00000578252 EHBP1L1Q8N3D4 1523 aa17.48■□□□□ 0.39
TRAPPC8-204ENST00000578252 ASXL2Q76L83 1435 aa17.47■□□□□ 0.39
TRAPPC8-204ENST00000578252 PLEKHD1A6NEE1 506 aa17.47■□□□□ 0.39
TRAPPC8-204ENST00000578252 WDR7Q9Y4E6 1490 aa17.47■□□□□ 0.39
TRAPPC8-204ENST00000578252 LRRC9Q6ZRR7 1453 aa17.46■□□□□ 0.39
TRAPPC8-204ENST00000578252 TROQ12816 1431 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC8-204ENST00000578252 MTUS2Q5JR59 1369 aa17.45■□□□□ 0.38
TRAPPC8-204ENST00000578252 MAGI3Q5TCQ9 1506 aa17.44■□□□□ 0.38
TRAPPC8-204ENST00000578252 KIF14Q15058 1648 aa17.43■□□□□ 0.38
TRAPPC8-204ENST00000578252 SUPT6HQ7KZ85 1726 aaKnown RBP17.42■□□□□ 0.38
TRAPPC8-204ENST00000578252 GLI2P10070 1586 aa17.36■□□□□ 0.37
TRAPPC8-204ENST00000578252 DIP2BQ9P265 1576 aa17.36■□□□□ 0.37
TRAPPC8-204ENST00000578252 KANK4Q5T7N3 995 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC8-204ENST00000578252 ABCC10Q5T3U5 1492 aa17.36■□□□□ 0.37
TRAPPC8-204ENST00000578252 ABCA9Q8IUA7 1624 aa17.36■□□□□ 0.37
TRAPPC8-204ENST00000578252 ZBTB12Q9Y330 459 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC8-204ENST00000578252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.33■□□□□ 0.37
TRAPPC8-204ENST00000578252 NCOA2Q15596 1464 aa17.33■□□□□ 0.37
TRAPPC8-204ENST00000578252 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
TRAPPC8-204ENST00000578252 KCNH8Q96L42 1107 aa17.32■□□□□ 0.36
TRAPPC8-204ENST00000578252 KIF13AQ9H1H9 1805 aa17.32■□□□□ 0.36
TRAPPC8-204ENST00000578252 TTC37Q6PGP7 1564 aa17.32■□□□□ 0.36
TRAPPC8-204ENST00000578252 MYO5CQ9NQX4 1742 aa17.31■□□□□ 0.36
TRAPPC8-204ENST00000578252 MAP3K4Q9Y6R4 1608 aa17.29■□□□□ 0.36
TRAPPC8-204ENST00000578252 PREX2Q70Z35 1606 aa17.29■□□□□ 0.36
TRAPPC8-204ENST00000578252 CDC42BPAQ5VT25 1732 aa17.28■□□□□ 0.36
TRAPPC8-204ENST00000578252 RBM42Q9BTD8 480 aaKnown RBP17.28■□□□□ 0.36
TRAPPC8-204ENST00000578252 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
TRAPPC8-204ENST00000578252 ARAP3Q8WWN8 1544 aa17.27■□□□□ 0.36
TRAPPC8-204ENST00000578252 FAM69CQ0P6D2 419 aa17.26■□□□□ 0.35
TRAPPC8-204ENST00000578252 CFAP74Q9C0B2 1584 aa17.24■□□□□ 0.35
TRAPPC8-204ENST00000578252 MYOM3Q5VTT5 1437 aa17.24■□□□□ 0.35
TRAPPC8-204ENST00000578252 CD109Q6YHK3 1445 aa17.24■□□□□ 0.35
TRAPPC8-204ENST00000578252 GPATCH8Q9UKJ3 1502 aaKnown RBP17.24■□□□□ 0.35
TRAPPC8-204ENST00000578252 PLCH2O75038 1416 aa17.23■□□□□ 0.35
TRAPPC8-204ENST00000578252 PPARGC1BQ86YN6 1023 aaKnown RBP17.23■□□□□ 0.35
TRAPPC8-204ENST00000578252 CDC42BPBQ9Y5S2 1711 aa17.23■□□□□ 0.35
TRAPPC8-204ENST00000578252 PHLDB1Q86UU1 1377 aa17.22■□□□□ 0.35
TRAPPC8-204ENST00000578252 MIA2Q96PC5 1412 aa17.21■□□□□ 0.35
TRAPPC8-204ENST00000578252 ARHGAP5Q13017 1502 aa17.21■□□□□ 0.34
TRAPPC8-204ENST00000578252 TEX14Q8IWB6 1497 aa17.2■□□□□ 0.34
TRAPPC8-204ENST00000578252 PPRC1Q5VV67 1664 aaKnown RBP17.18■□□□□ 0.34
TRAPPC8-204ENST00000578252 CFDP1Q9UEE9 299 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC8-204ENST00000578252 FGD6Q6ZV73 1430 aa17.18■□□□□ 0.34
TRAPPC8-204ENST00000578252 TSPOAP1O95153 1857 aa17.18■□□□□ 0.34
TRAPPC8-204ENST00000578252 FANCAO15360 1455 aa17.17■□□□□ 0.34
TRAPPC8-204ENST00000578252 NEO1Q92859 1461 aa17.17■□□□□ 0.34
TRAPPC8-204ENST00000578252 EFCAB2Q5VUJ9 269 aa17.16■□□□□ 0.34
TRAPPC8-204ENST00000578252 PTPN23Q9H3S7 1636 aa17.16■□□□□ 0.34
TRAPPC8-204ENST00000578252 PLEKHH2Q8IVE3 1493 aa17.15■□□□□ 0.34
TRAPPC8-204ENST00000578252 TCOF1Q13428 1488 aaKnown RBP17.14■□□□□ 0.33
TRAPPC8-204ENST00000578252 RRBP1Q9P2E9 1410 aaKnown RBP17.13■□□□□ 0.33
TRAPPC8-204ENST00000578252 SAMD9LQ8IVG5 1584 aa17.13■□□□□ 0.33
TRAPPC8-204ENST00000578252 CAMSAP2Q08AD1 1489 aa17.12■□□□□ 0.33
TRAPPC8-204ENST00000578252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRAPPC8-204ENST00000578252 ABCC1P33527 1531 aa17.11■□□□□ 0.33
TRAPPC8-204ENST00000578252 AKNAQ7Z591 1439 aa17.1■□□□□ 0.33
TRAPPC8-204ENST00000578252 KIAA1107Q9UPP5 1409 aa17.09■□□□□ 0.33
TRAPPC8-204ENST00000578252 ADGRL1O94910 1474 aa17.09■□□□□ 0.33
TRAPPC8-204ENST00000578252 ZNF777Q9ULD5 760 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC8-204ENST00000578252 ARHGEF5Q12774 1597 aa17.07■□□□□ 0.32
TRAPPC8-204ENST00000578252 SYCP2Q9BX26 1530 aa17.06■□□□□ 0.32
TRAPPC8-204ENST00000578252 DNMT1P26358 1616 aaKnown RBP17.04■□□□□ 0.32
TRAPPC8-204ENST00000578252 FAM50AQ14320 339 aaKnown RBP17.04■□□□□ 0.32
TRAPPC8-204ENST00000578252 RSPH4AQ5TD94 716 aa17.04■□□□□ 0.32
TRAPPC8-204ENST00000578252 SCAPERQ9BY12 1400 aa17.04■□□□□ 0.32
TRAPPC8-204ENST00000578252 ZNF644Q9H582 1327 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC8-204ENST00000578252 DENND4BO75064 1496 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC8-204ENST00000578252 CCDC141Q6ZP82 1450 aa17.03■□□□□ 0.32
TRAPPC8-204ENST00000578252 CROCC2H7BZ55 1655 aa17.03■□□□□ 0.32
TRAPPC8-204ENST00000578252 ZNF518AQ6AHZ1 1483 aa17.02■□□□□ 0.32
TRAPPC8-204ENST00000578252 MBD5Q9P267 1494 aa17.02■□□□□ 0.32
TRAPPC8-204ENST00000578252 RICTORQ6R327 1708 aa17.01■□□□□ 0.31
TRAPPC8-204ENST00000578252 ARHGEF12Q9NZN5 1544 aa17.01■□□□□ 0.31
TRAPPC8-204ENST00000578252 POGZQ7Z3K3 1410 aa17.01■□□□□ 0.31
TRAPPC8-204ENST00000578252 MKRN4PQ13434 485 aaPredicted RBP17■□□□□ 0.31
TRAPPC8-204ENST00000578252 SHANK2Q9UPX8 1470 aa16.99■□□□□ 0.31
TRAPPC8-204ENST00000578252 DAPK1P53355 1430 aa16.99■□□□□ 0.31
TRAPPC8-204ENST00000578252 KDM6BO15054 1643 aa16.99■□□□□ 0.31
TRAPPC8-204ENST00000578252 KDM5CP41229 1560 aa16.98■□□□□ 0.31
TRAPPC8-204ENST00000578252 HNRNPMP52272 730 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRAPPC8-204ENST00000578252 MAST1Q9Y2H9 1570 aa16.98■□□□□ 0.31
TRAPPC8-204ENST00000578252 TRAPPC8Q9Y2L5 1435 aa16.97■□□□□ 0.31
TRAPPC8-204ENST00000578252 TRIM26Q12899 539 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC8-204ENST00000578252 FRMPD1Q5SYB0 1578 aa16.97■□□□□ 0.31
TRAPPC8-204ENST00000578252 ABCC5O15440 1437 aa16.96■□□□□ 0.31
TRAPPC8-204ENST00000578252 ZMYM4Q5VZL5 1548 aa16.96■□□□□ 0.31
TRAPPC8-204ENST00000578252 ADGBQ8N7X0 1667 aa16.96■□□□□ 0.31
TRAPPC8-204ENST00000578252 TSPY4P0CV99 314 aa16.95■□□□□ 0.3
TRAPPC8-204ENST00000578252 TSPY10P0CW01 314 aa16.95■□□□□ 0.3
TRAPPC8-204ENST00000578252 HECW2Q9P2P5 1572 aa16.94■□□□□ 0.3
TRAPPC8-204ENST00000578252 INO80Q9ULG1 1556 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC8-204ENST00000578252 AKT1S1Q96B36 256 aa16.94■□□□□ 0.3
TRAPPC8-204ENST00000578252 RTEL1-TNFRSF6BF6WH68 1400 aa16.94■□□□□ 0.3
TRAPPC8-204ENST00000578252 C9orf84Q5VXU9 1444 aa16.93■□□□□ 0.3
TRAPPC8-204ENST00000578252 MAGI2Q86UL8 1455 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms