RNA–Protein interactions for RNA: ENST00000578103.1

TTC19-209, Transcript of tetratricopeptide repeat domain 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TTC19, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-209ENST00000578103 ARID3CA6NKF2 412 aa10□□□□□ -0.81
TTC19-209ENST00000578103 ARAP3Q8WWN8 1544 aa9.99□□□□□ -0.81
TTC19-209ENST00000578103 U3KPZ7 1027 aaPredicted RBP9.98□□□□□ -0.81
TTC19-209ENST00000578103 COL17A1Q9UMD9 1497 aaPredicted RBP9.98□□□□□ -0.81
TTC19-209ENST00000578103 CLIP1P30622 1438 aa9.97□□□□□ -0.81
TTC19-209ENST00000578103 SAMD1Q6SPF0 538 aaPredicted RBP9.96□□□□□ -0.82
TTC19-209ENST00000578103 CASKIN1Q8WXD9 1431 aa9.96□□□□□ -0.82
TTC19-209ENST00000578103 CCDC18Q5T9S5 1454 aa9.96□□□□□ -0.82
TTC19-209ENST00000578103 CFAP74Q9C0B2 1584 aa9.95□□□□□ -0.82
TTC19-209ENST00000578103 CDK13Q14004 1512 aaKnown RBP9.94□□□□□ -0.82
TTC19-209ENST00000578103 FYCO1Q9BQS8 1478 aa9.94□□□□□ -0.82
TTC19-209ENST00000578103 FANCAO15360 1455 aa9.93□□□□□ -0.82
TTC19-209ENST00000578103 TROQ12816 1431 aaPredicted RBP9.93□□□□□ -0.82
TTC19-209ENST00000578103 ATP1B4Q9UN42 357 aaPredicted RBP9.93□□□□□ -0.82
TTC19-209ENST00000578103 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.92□□□□□ -0.82
TTC19-209ENST00000578103 DENND4BO75064 1496 aaPredicted RBP9.91□□□□□ -0.82
TTC19-209ENST00000578103 PLCH2O75038 1416 aa9.91□□□□□ -0.82
TTC19-209ENST00000578103 KIF14Q15058 1648 aa9.91□□□□□ -0.82
TTC19-209ENST00000578103 AKNAQ7Z591 1439 aa9.9□□□□□ -0.82
TTC19-209ENST00000578103 PCF11O94913 1555 aaKnown RBP9.9□□□□□ -0.82
TTC19-209ENST00000578103 TTC37Q6PGP7 1564 aa9.9□□□□□ -0.82
TTC19-209ENST00000578103 ADGRL1O94910 1474 aa9.9□□□□□ -0.83
TTC19-209ENST00000578103 KDM4FA0A1W2PPD8 638 aa9.89□□□□□ -0.83
TTC19-209ENST00000578103 MAGI2Q86UL8 1455 aa9.88□□□□□ -0.83
TTC19-209ENST00000578103 EFCAB2Q5VUJ9 269 aa9.88□□□□□ -0.83
TTC19-209ENST00000578103 CEP162Q5TB80 1403 aa9.87□□□□□ -0.83
TTC19-209ENST00000578103 ZMYM4Q5VZL5 1548 aa9.87□□□□□ -0.83
TTC19-209ENST00000578103 RAPGEF3O95398 923 aa9.86□□□□□ -0.83
TTC19-209ENST00000578103 POGZQ7Z3K3 1410 aa9.86□□□□□ -0.83
TTC19-209ENST00000578103 ARHGEF40Q8TER5 1519 aa9.86□□□□□ -0.83
TTC19-209ENST00000578103 FRMPD1Q5SYB0 1578 aa9.85□□□□□ -0.83
TTC19-209ENST00000578103 ZNF518AQ6AHZ1 1483 aa9.85□□□□□ -0.83
TTC19-209ENST00000578103 MYO5CQ9NQX4 1742 aa9.85□□□□□ -0.83
TTC19-209ENST00000578103 SCAPERQ9BY12 1400 aa9.84□□□□□ -0.83
TTC19-209ENST00000578103 ARHGAP5Q13017 1502 aa9.84□□□□□ -0.83
TTC19-209ENST00000578103 ZNF219Q9P2Y4 722 aaPredicted RBP9.83□□□□□ -0.84
TTC19-209ENST00000578103 ZFYVE16Q7Z3T8 1539 aa9.82□□□□□ -0.84
TTC19-209ENST00000578103 RICTORQ6R327 1708 aa9.82□□□□□ -0.84
TTC19-209ENST00000578103 MTUS2Q5JR59 1369 aa9.82□□□□□ -0.84
TTC19-209ENST00000578103 PLEKHH2Q8IVE3 1493 aa9.8□□□□□ -0.84
TTC19-209ENST00000578103 PREX2Q70Z35 1606 aa9.8□□□□□ -0.84
TTC19-209ENST00000578103 EHBP1L1Q8N3D4 1523 aa9.8□□□□□ -0.84
TTC19-209ENST00000578103 ARID4BQ4LE39 1312 aaPredicted RBP9.8□□□□□ -0.84
TTC19-209ENST00000578103 KDM5CP41229 1560 aa9.8□□□□□ -0.84
TTC19-209ENST00000578103 CCNB3Q8WWL7 1395 aa9.79□□□□□ -0.84
TTC19-209ENST00000578103 VPS8Q8N3P4 1428 aa9.79□□□□□ -0.84
TTC19-209ENST00000578103 LRRIQ1Q96JM4 1722 aa9.79□□□□□ -0.84
TTC19-209ENST00000578103 ABCC1P33527 1531 aa9.78□□□□□ -0.84
TTC19-209ENST00000578103 C9orf84Q5VXU9 1444 aa9.78□□□□□ -0.84
TTC19-209ENST00000578103 ATP10AO60312 1499 aa9.78□□□□□ -0.84
TTC19-209ENST00000578103 MLH3Q9UHC1 1453 aa9.78□□□□□ -0.84
TTC19-209ENST00000578103 YEATS2Q9ULM3 1422 aa9.77□□□□□ -0.85
TTC19-209ENST00000578103 KIAA1107Q9UPP5 1409 aa9.77□□□□□ -0.85
TTC19-209ENST00000578103 GPATCH8Q9UKJ3 1502 aaKnown RBP9.77□□□□□ -0.85
TTC19-209ENST00000578103 CFDP1Q9UEE9 299 aaPredicted RBP9.76□□□□□ -0.85
TTC19-209ENST00000578103 HECW2Q9P2P5 1572 aa9.75□□□□□ -0.85
TTC19-209ENST00000578103 ADAMTSL3P82987 1691 aa9.75□□□□□ -0.85
TTC19-209ENST00000578103 PTPRMP28827 1452 aa9.75□□□□□ -0.85
TTC19-209ENST00000578103 BCORL1Q5H9F3 1711 aa9.75□□□□□ -0.85
TTC19-209ENST00000578103 MAP3K1Q13233 1512 aa9.75□□□□□ -0.85
TTC19-209ENST00000578103 REREQ9P2R6 1566 aa9.75□□□□□ -0.85
TTC19-209ENST00000578103 CDC42BPBQ9Y5S2 1711 aa9.74□□□□□ -0.85
TTC19-209ENST00000578103 AFAP1Q8N556 730 aa9.74□□□□□ -0.85
TTC19-209ENST00000578103 MYT1LQ9UL68 1186 aa9.73□□□□□ -0.85
TTC19-209ENST00000578103 CDC42BPAQ5VT25 1732 aa9.73□□□□□ -0.85
TTC19-209ENST00000578103 TRAPPC8Q9Y2L5 1435 aa9.73□□□□□ -0.85
TTC19-209ENST00000578103 TIAM1Q13009 1591 aa9.72□□□□□ -0.85
TTC19-209ENST00000578103 ITSN2Q9NZM3 1697 aa9.72□□□□□ -0.85
TTC19-209ENST00000578103 AGLP35573 1532 aa9.72□□□□□ -0.85
TTC19-209ENST00000578103 SYCP2Q9BX26 1530 aa9.72□□□□□ -0.85
TTC19-209ENST00000578103 LOC105371045A0A1W2PR82 267 aa9.71□□□□□ -0.86
TTC19-209ENST00000578103 SPDYE4A6NLX3 237 aa9.71□□□□□ -0.86
TTC19-209ENST00000578103 RSPH4AQ5TD94 716 aa9.71□□□□□ -0.86
TTC19-209ENST00000578103 ZNF777Q9ULD5 760 aaPredicted RBP9.71□□□□□ -0.86
TTC19-209ENST00000578103 SPAG9O60271 1321 aaKnown RBP9.71□□□□□ -0.86
TTC19-209ENST00000578103 ARHGEF12Q9NZN5 1544 aa9.71□□□□□ -0.86
TTC19-209ENST00000578103 SAMD9LQ8IVG5 1584 aa9.71□□□□□ -0.86
TTC19-209ENST00000578103 DIP2CQ9Y2E4 1556 aa9.71□□□□□ -0.86
TTC19-209ENST00000578103 MADDQ8WXG6 1647 aa9.71□□□□□ -0.86
TTC19-209ENST00000578103 NCOA2Q15596 1464 aa9.7□□□□□ -0.86
TTC19-209ENST00000578103 LRRC9Q6ZRR7 1453 aa9.7□□□□□ -0.86
TTC19-209ENST00000578103 SUPT6HQ7KZ85 1726 aaKnown RBP9.7□□□□□ -0.86
TTC19-209ENST00000578103 MKRN4PQ13434 485 aaPredicted RBP9.69□□□□□ -0.86
TTC19-209ENST00000578103 CNTLNQ9NXG0 1405 aa9.69□□□□□ -0.86
TTC19-209ENST00000578103 RTEL1-TNFRSF6BF6WH68 1400 aa9.68□□□□□ -0.86
TTC19-209ENST00000578103 APLP2Q06481 763 aa9.68□□□□□ -0.86
TTC19-209ENST00000578103 FBXO3Q9UK99 471 aa9.68□□□□□ -0.86
TTC19-209ENST00000578103 ABCA6Q8N139 1617 aa9.67□□□□□ -0.86
TTC19-209ENST00000578103 ATP7AQ04656 1500 aa9.67□□□□□ -0.86
TTC19-209ENST00000578103 ESF1Q9H501 851 aaKnown RBP9.67□□□□□ -0.86
TTC19-209ENST00000578103 INO80Q9ULG1 1556 aaPredicted RBP9.67□□□□□ -0.86
TTC19-209ENST00000578103 CCDC141Q6ZP82 1450 aa9.66□□□□□ -0.86
TTC19-209ENST00000578103 MBD5Q9P267 1494 aa9.66□□□□□ -0.86
TTC19-209ENST00000578103 MIA2Q96PC5 1412 aa9.66□□□□□ -0.86
TTC19-209ENST00000578103 HNRNPMP52272 730 aaKnown RBP eCLIP9.66□□□□□ -0.86
TTC19-209ENST00000578103 MLECQ14165 292 aa9.66□□□□□ -0.86
TTC19-209ENST00000578103 RIMS1Q86UR5 1692 aaKnown RBP9.66□□□□□ -0.86
TTC19-209ENST00000578103 CAMSAP2Q08AD1 1489 aa9.66□□□□□ -0.86
TTC19-209ENST00000578103 KIDINS220Q9ULH0 1771 aa9.65□□□□□ -0.86
TTC19-209ENST00000578103 FER1L4A9Z1Z3 1794 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms