RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 NUP153P49790 1475 aaKnown RBP10.55□□□□□ -0.72
PPP4R1-207ENST00000578010 EPRSP07814 1512 aaKnown RBP10.55□□□□□ -0.72
PPP4R1-207ENST00000578010 GLI2P10070 1586 aa10.55□□□□□ -0.72
PPP4R1-207ENST00000578010 MAP3K4Q9Y6R4 1608 aa10.55□□□□□ -0.72
PPP4R1-207ENST00000578010 PCF11O94913 1555 aaKnown RBP10.54□□□□□ -0.72
PPP4R1-207ENST00000578010 ATP10BO94823 1461 aa10.54□□□□□ -0.72
PPP4R1-207ENST00000578010 CFAP43Q8NDM7 1665 aa10.53□□□□□ -0.72
PPP4R1-207ENST00000578010 CDK13Q14004 1512 aaKnown RBP10.53□□□□□ -0.72
PPP4R1-207ENST00000578010 KDM6BO15054 1643 aa10.52□□□□□ -0.73
PPP4R1-207ENST00000578010 PPRC1Q5VV67 1664 aaKnown RBP10.52□□□□□ -0.73
PPP4R1-207ENST00000578010 LRRIQ1Q96JM4 1722 aa10.51□□□□□ -0.73
PPP4R1-207ENST00000578010 TEX14Q8IWB6 1497 aa10.49□□□□□ -0.73
PPP4R1-207ENST00000578010 ZBTB12Q9Y330 459 aaPredicted RBP10.49□□□□□ -0.73
PPP4R1-207ENST00000578010 ABCA9Q8IUA7 1624 aa10.47□□□□□ -0.73
PPP4R1-207ENST00000578010 CD109Q6YHK3 1445 aa10.47□□□□□ -0.73
PPP4R1-207ENST00000578010 CASKIN1Q8WXD9 1431 aa10.47□□□□□ -0.73
PPP4R1-207ENST00000578010 CCDC18Q5T9S5 1454 aa10.47□□□□□ -0.73
PPP4R1-207ENST00000578010 FYCO1Q9BQS8 1478 aa10.47□□□□□ -0.73
PPP4R1-207ENST00000578010 KIF14Q15058 1648 aa10.46□□□□□ -0.74
PPP4R1-207ENST00000578010 TTC37Q6PGP7 1564 aa10.44□□□□□ -0.74
PPP4R1-207ENST00000578010 MYO5CQ9NQX4 1742 aa10.44□□□□□ -0.74
PPP4R1-207ENST00000578010 CFAP74Q9C0B2 1584 aa10.43□□□□□ -0.74
PPP4R1-207ENST00000578010 MAGI3Q5TCQ9 1506 aa10.43□□□□□ -0.74
PPP4R1-207ENST00000578010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.43□□□□□ -0.74
PPP4R1-207ENST00000578010 VPS8Q8N3P4 1428 aa10.42□□□□□ -0.74
PPP4R1-207ENST00000578010 PPARGC1BQ86YN6 1023 aaKnown RBP10.42□□□□□ -0.74
PPP4R1-207ENST00000578010 MTUS2Q5JR59 1369 aa10.41□□□□□ -0.74
PPP4R1-207ENST00000578010 KANK4Q5T7N3 995 aaPredicted RBP10.41□□□□□ -0.74
PPP4R1-207ENST00000578010 TROQ12816 1431 aaPredicted RBP10.41□□□□□ -0.74
PPP4R1-207ENST00000578010 ZNF777Q9ULD5 760 aaPredicted RBP10.39□□□□□ -0.75
PPP4R1-207ENST00000578010 EFCAB2Q5VUJ9 269 aa10.38□□□□□ -0.75
PPP4R1-207ENST00000578010 ARHGAP5Q13017 1502 aa10.37□□□□□ -0.75
PPP4R1-207ENST00000578010 FANCAO15360 1455 aa10.36□□□□□ -0.75
PPP4R1-207ENST00000578010 NEO1Q92859 1461 aa10.36□□□□□ -0.75
PPP4R1-207ENST00000578010 CFDP1Q9UEE9 299 aaPredicted RBP10.36□□□□□ -0.75
PPP4R1-207ENST00000578010 EHBP1L1Q8N3D4 1523 aa10.36□□□□□ -0.75
PPP4R1-207ENST00000578010 PREX2Q70Z35 1606 aa10.36□□□□□ -0.75
PPP4R1-207ENST00000578010 CDC42BPAQ5VT25 1732 aa10.36□□□□□ -0.75
PPP4R1-207ENST00000578010 MYT1LQ9UL68 1186 aa10.35□□□□□ -0.75
PPP4R1-207ENST00000578010 COL17A1Q9UMD9 1497 aaPredicted RBP10.35□□□□□ -0.75
PPP4R1-207ENST00000578010 CDC42BPBQ9Y5S2 1711 aa10.34□□□□□ -0.75
PPP4R1-207ENST00000578010 CCNB3Q8WWL7 1395 aa10.34□□□□□ -0.75
PPP4R1-207ENST00000578010 TIAM1Q13009 1591 aa10.34□□□□□ -0.75
PPP4R1-207ENST00000578010 ARAP3Q8WWN8 1544 aa10.33□□□□□ -0.76
PPP4R1-207ENST00000578010 SUPT6HQ7KZ85 1726 aaKnown RBP10.33□□□□□ -0.76
PPP4R1-207ENST00000578010 RBM42Q9BTD8 480 aaKnown RBP10.33□□□□□ -0.76
PPP4R1-207ENST00000578010 ITSN2Q9NZM3 1697 aa10.33□□□□□ -0.76
PPP4R1-207ENST00000578010 RICTORQ6R327 1708 aa10.33□□□□□ -0.76
PPP4R1-207ENST00000578010 PLCH2O75038 1416 aa10.33□□□□□ -0.76
PPP4R1-207ENST00000578010 AKNAQ7Z591 1439 aa10.33□□□□□ -0.76
PPP4R1-207ENST00000578010 ADGRL1O94910 1474 aa10.32□□□□□ -0.76
PPP4R1-207ENST00000578010 PHLDB1Q86UU1 1377 aa10.32□□□□□ -0.76
PPP4R1-207ENST00000578010 RAPGEF3O95398 923 aa10.32□□□□□ -0.76
PPP4R1-207ENST00000578010 FRMPD1Q5SYB0 1578 aa10.31□□□□□ -0.76
PPP4R1-207ENST00000578010 DENND4BO75064 1496 aaPredicted RBP10.31□□□□□ -0.76
PPP4R1-207ENST00000578010 HNRNPMP52272 730 aaKnown RBP eCLIP10.3□□□□□ -0.76
PPP4R1-207ENST00000578010 ZNF644Q9H582 1327 aaPredicted RBP10.29□□□□□ -0.76
PPP4R1-207ENST00000578010 LRRC9Q6ZRR7 1453 aa10.29□□□□□ -0.76
PPP4R1-207ENST00000578010 SCAPERQ9BY12 1400 aa10.28□□□□□ -0.76
PPP4R1-207ENST00000578010 AFAP1Q8N556 730 aa10.28□□□□□ -0.76
PPP4R1-207ENST00000578010 ABCC1P33527 1531 aa10.28□□□□□ -0.76
PPP4R1-207ENST00000578010 ARHGEF40Q8TER5 1519 aa10.28□□□□□ -0.76
PPP4R1-207ENST00000578010 SAMD9LQ8IVG5 1584 aa10.26□□□□□ -0.77
PPP4R1-207ENST00000578010 POGZQ7Z3K3 1410 aa10.26□□□□□ -0.77
PPP4R1-207ENST00000578010 NCOA2Q15596 1464 aa10.26□□□□□ -0.77
PPP4R1-207ENST00000578010 FAM50AQ14320 339 aaKnown RBP10.26□□□□□ -0.77
PPP4R1-207ENST00000578010 ZMYM4Q5VZL5 1548 aa10.26□□□□□ -0.77
PPP4R1-207ENST00000578010 ZFYVE16Q7Z3T8 1539 aa10.26□□□□□ -0.77
PPP4R1-207ENST00000578010 MAP3K1Q13233 1512 aa10.25□□□□□ -0.77
PPP4R1-207ENST00000578010 SYCP2Q9BX26 1530 aa10.25□□□□□ -0.77
PPP4R1-207ENST00000578010 GPATCH8Q9UKJ3 1502 aaKnown RBP10.25□□□□□ -0.77
PPP4R1-207ENST00000578010 HECW2Q9P2P5 1572 aa10.25□□□□□ -0.77
PPP4R1-207ENST00000578010 ZNF518AQ6AHZ1 1483 aa10.24□□□□□ -0.77
PPP4R1-207ENST00000578010 TSPY4P0CV99 314 aa10.24□□□□□ -0.77
PPP4R1-207ENST00000578010 TSPY10P0CW01 314 aa10.24□□□□□ -0.77
PPP4R1-207ENST00000578010 RSPH4AQ5TD94 716 aa10.23□□□□□ -0.77
PPP4R1-207ENST00000578010 ARID4BQ4LE39 1312 aaPredicted RBP10.23□□□□□ -0.77
PPP4R1-207ENST00000578010 ITGAEP38570 1179 aa10.22□□□□□ -0.77
PPP4R1-207ENST00000578010 MKRN4PQ13434 485 aaPredicted RBP10.22□□□□□ -0.77
PPP4R1-207ENST00000578010 PLEKHH2Q8IVE3 1493 aa10.22□□□□□ -0.77
PPP4R1-207ENST00000578010 KDM5CP41229 1560 aa10.22□□□□□ -0.77
PPP4R1-207ENST00000578010 SPAG9O60271 1321 aaKnown RBP10.21□□□□□ -0.78
PPP4R1-207ENST00000578010 YEATS2Q9ULM3 1422 aa10.21□□□□□ -0.78
PPP4R1-207ENST00000578010 MAGI2Q86UL8 1455 aa10.2□□□□□ -0.78
PPP4R1-207ENST00000578010 ABCA6Q8N139 1617 aa10.2□□□□□ -0.78
PPP4R1-207ENST00000578010 ARHGEF12Q9NZN5 1544 aa10.2□□□□□ -0.78
PPP4R1-207ENST00000578010 BCORL1Q5H9F3 1711 aa10.19□□□□□ -0.78
PPP4R1-207ENST00000578010 CAMSAP2Q08AD1 1489 aa10.19□□□□□ -0.78
PPP4R1-207ENST00000578010 TRAPPC8Q9Y2L5 1435 aa10.19□□□□□ -0.78
PPP4R1-207ENST00000578010 CHIC2Q9UKJ5 165 aa10.19□□□□□ -0.78
PPP4R1-207ENST00000578010 DIP2CQ9Y2E4 1556 aa10.18□□□□□ -0.78
PPP4R1-207ENST00000578010 C9orf84Q5VXU9 1444 aa10.18□□□□□ -0.78
PPP4R1-207ENST00000578010 KIDINS220Q9ULH0 1771 aa10.18□□□□□ -0.78
PPP4R1-207ENST00000578010 SIGLEC1Q9BZZ2 1709 aa10.18□□□□□ -0.78
PPP4R1-207ENST00000578010 MYOM3Q5VTT5 1437 aa10.17□□□□□ -0.78
PPP4R1-207ENST00000578010 ATP7AQ04656 1500 aa10.17□□□□□ -0.78
PPP4R1-207ENST00000578010 MIA2Q96PC5 1412 aa10.16□□□□□ -0.78
PPP4R1-207ENST00000578010 KIAA1107Q9UPP5 1409 aa10.16□□□□□ -0.78
PPP4R1-207ENST00000578010 FER1L4A9Z1Z3 1794 aa10.16□□□□□ -0.78
PPP4R1-207ENST00000578010 RIMS1Q86UR5 1692 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms