RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 EFCAB5A4FU69 1503 aa6.23□□□□□ -1.41
NF1-218ENST00000577967 NCOA2Q15596 1464 aa6.23□□□□□ -1.41
NF1-218ENST00000577967 KNSTRNQ9Y448 316 aa6.23□□□□□ -1.41
NF1-218ENST00000577967 ZNF644Q9H582 1327 aaPredicted RBP6.23□□□□□ -1.41
NF1-218ENST00000577967 HECW1Q76N89 1606 aa6.23□□□□□ -1.41
NF1-218ENST00000577967 ABCA10Q8WWZ4 1543 aa6.23□□□□□ -1.41
NF1-218ENST00000577967 TNNT2P45379 298 aaPredicted RBP6.23□□□□□ -1.41
NF1-218ENST00000577967 NPM2Q86SE8 214 aaKnown RBP6.23□□□□□ -1.41
NF1-218ENST00000577967 NUTM2DQ5VT03 806 aaPredicted RBP6.22□□□□□ -1.41
NF1-218ENST00000577967 POGKQ9P215 609 aa6.22□□□□□ -1.41
NF1-218ENST00000577967 ROCK2O75116 1388 aaKnown RBP6.22□□□□□ -1.41
NF1-218ENST00000577967 PCF11O94913 1555 aaKnown RBP6.22□□□□□ -1.41
NF1-218ENST00000577967 FGD6Q6ZV73 1430 aa6.22□□□□□ -1.41
NF1-218ENST00000577967 PRG4Q92954 1404 aaPredicted RBP6.22□□□□□ -1.41
NF1-218ENST00000577967 SAFB2Q14151 953 aaKnown RBP eCLIP6.22□□□□□ -1.41
NF1-218ENST00000577967 KIF3BO15066 747 aa6.22□□□□□ -1.41
NF1-218ENST00000577967 OSCARQ8IYS5 282 aa6.22□□□□□ -1.41
NF1-218ENST00000577967 MYOM3Q5VTT5 1437 aa6.22□□□□□ -1.41
NF1-218ENST00000577967 SPAG9O60271 1321 aaKnown RBP6.22□□□□□ -1.41
NF1-218ENST00000577967 KIF21AQ7Z4S6 1674 aa6.21□□□□□ -1.41
NF1-218ENST00000577967 TIAM1Q13009 1591 aa6.21□□□□□ -1.41
NF1-218ENST00000577967 PPM1GO15355 546 aaPredicted RBP6.21□□□□□ -1.42
NF1-218ENST00000577967 STK26Q9P289 416 aa6.21□□□□□ -1.42
NF1-218ENST00000577967 CYB5RLQ6IPT4 315 aa6.2□□□□□ -1.42
NF1-218ENST00000577967 TMF1P82094 1093 aa6.2□□□□□ -1.42
NF1-218ENST00000577967 CDCA8Q53HL2 280 aa6.2□□□□□ -1.42
NF1-218ENST00000577967 L3MBTL2Q969R5 705 aa6.2□□□□□ -1.42
NF1-218ENST00000577967 EHBP1L1Q8N3D4 1523 aa6.2□□□□□ -1.42
NF1-218ENST00000577967 ARHGAP5Q13017 1502 aa6.2□□□□□ -1.42
NF1-218ENST00000577967 SUPT6HQ7KZ85 1726 aaKnown RBP6.2□□□□□ -1.42
NF1-218ENST00000577967 TIMELESSQ9UNS1 1208 aa6.2□□□□□ -1.42
NF1-218ENST00000577967 CDK13Q14004 1512 aaKnown RBP6.2□□□□□ -1.42
NF1-218ENST00000577967 IQGAP2Q13576 1575 aa6.19□□□□□ -1.42
NF1-218ENST00000577967 RTL5Q5HYW3 569 aaPredicted RBP6.18□□□□□ -1.42
NF1-218ENST00000577967 CCDC136Q96JN2 1154 aa6.18□□□□□ -1.42
NF1-218ENST00000577967 SUPT16HQ9Y5B9 1047 aaKnown RBP6.18□□□□□ -1.42
NF1-218ENST00000577967 NEUROD2Q15784 382 aa6.17□□□□□ -1.42
NF1-218ENST00000577967 SRPK2P78362 688 aaKnown RBP6.17□□□□□ -1.42
NF1-218ENST00000577967 ZNF608Q9ULD9 1512 aaPredicted RBP6.17□□□□□ -1.42
NF1-218ENST00000577967 WASHC2CQ9Y4E1 1318 aa6.17□□□□□ -1.42
NF1-218ENST00000577967 RRBP1Q9P2E9 1410 aaKnown RBP6.17□□□□□ -1.42
NF1-218ENST00000577967 RSPH4AQ5TD94 716 aa6.17□□□□□ -1.42
NF1-218ENST00000577967 SYNJ2O15056 1496 aa6.17□□□□□ -1.42
NF1-218ENST00000577967 CTTNBP2Q8WZ74 1663 aa6.17□□□□□ -1.42
NF1-218ENST00000577967 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.16□□□□□ -1.42
NF1-218ENST00000577967 CFAP53Q96M91 514 aa6.16□□□□□ -1.42
NF1-218ENST00000577967 LAS1LQ9Y4W2 734 aaKnown RBP6.16□□□□□ -1.42
NF1-218ENST00000577967 ANP32AP39687 249 aaKnown RBP6.15□□□□□ -1.42
NF1-218ENST00000577967 CCDC144AA2RUR9 1427 aa6.15□□□□□ -1.43
NF1-218ENST00000577967 GRIN2AQ12879 1464 aa6.15□□□□□ -1.43
NF1-218ENST00000577967 SOX12O15370 315 aa6.14□□□□□ -1.43
NF1-218ENST00000577967 EPRSP07814 1512 aaKnown RBP6.14□□□□□ -1.43
NF1-218ENST00000577967 LMOD2Q6P5Q4 547 aa6.14□□□□□ -1.43
NF1-218ENST00000577967 KIAA0586Q9BVV6 1533 aa6.14□□□□□ -1.43
NF1-218ENST00000577967 KTN1Q86UP2 1357 aaKnown RBP6.14□□□□□ -1.43
NF1-218ENST00000577967 A0A0G2JS52 829 aa6.14□□□□□ -1.43
NF1-218ENST00000577967 U2SURPO15042 1029 aaKnown RBP6.14□□□□□ -1.43
NF1-218ENST00000577967 MORC1Q86VD1 984 aa6.13□□□□□ -1.43
NF1-218ENST00000577967 PBRM1Q86U86 1689 aa6.13□□□□□ -1.43
NF1-218ENST00000577967 PTPN23Q9H3S7 1636 aa6.13□□□□□ -1.43
NF1-218ENST00000577967 KIF15Q9NS87 1388 aa6.13□□□□□ -1.43
NF1-218ENST00000577967 FAM69CQ0P6D2 419 aa6.13□□□□□ -1.43
NF1-218ENST00000577967 EIF3AQ14152 1382 aaKnown RBP6.13□□□□□ -1.43
NF1-218ENST00000577967 CCER2I3L3R5 266 aa6.13□□□□□ -1.43
NF1-218ENST00000577967 HDGFP51858 240 aaKnown RBP6.13□□□□□ -1.43
NF1-218ENST00000577967 UACAQ9BZF9 1416 aa6.13□□□□□ -1.43
NF1-218ENST00000577967 HAP1P54257 671 aaPredicted RBP6.12□□□□□ -1.43
NF1-218ENST00000577967 MAPK8IP3Q9UPT6 1336 aa6.12□□□□□ -1.43
NF1-218ENST00000577967 PLB1Q6P1J6 1458 aa6.12□□□□□ -1.43
NF1-218ENST00000577967 MAGI1Q96QZ7 1491 aaPredicted RBP6.12□□□□□ -1.43
NF1-218ENST00000577967 MYT1Q01538 1121 aa6.12□□□□□ -1.43
NF1-218ENST00000577967 DAPK1P53355 1430 aa6.12□□□□□ -1.43
NF1-218ENST00000577967 KIF14Q15058 1648 aa6.11□□□□□ -1.43
NF1-218ENST00000577967 TRAK1Q9UPV9 953 aa6.11□□□□□ -1.43
NF1-218ENST00000577967 ARHGEF11O15085 1522 aa6.11□□□□□ -1.43
NF1-218ENST00000577967 ANKRD50Q9ULJ7 1429 aa6.11□□□□□ -1.43
NF1-218ENST00000577967 NUDCQ9Y266 331 aa6.1□□□□□ -1.43
NF1-218ENST00000577967 TROQ12816 1431 aaPredicted RBP6.1□□□□□ -1.43
NF1-218ENST00000577967 ST20-MTHFSA0A0A6YYL1 179 aa6.1□□□□□ -1.43
NF1-218ENST00000577967 C9orf84Q5VXU9 1444 aa6.1□□□□□ -1.43
NF1-218ENST00000577967 CAMSAP2Q08AD1 1489 aa6.1□□□□□ -1.43
NF1-218ENST00000577967 USP47Q96K76 1375 aa6.09□□□□□ -1.43
NF1-218ENST00000577967 HDGFL2Q7Z4V5 671 aaPredicted RBP6.09□□□□□ -1.43
NF1-218ENST00000577967 AFAP1Q8N556 730 aa6.09□□□□□ -1.43
NF1-218ENST00000577967 FRAT1Q92837 279 aaPredicted RBP6.09□□□□□ -1.43
NF1-218ENST00000577967 ADAMTS12P58397 1594 aa6.09□□□□□ -1.43
NF1-218ENST00000577967 RAPGEF6Q8TEU7 1601 aa6.09□□□□□ -1.43
NF1-218ENST00000577967 THOC2Q8NI27 1593 aaKnown RBP6.08□□□□□ -1.44
NF1-218ENST00000577967 PAK3O75914 559 aaPredicted RBP6.08□□□□□ -1.44
NF1-218ENST00000577967 RALBP1Q15311 655 aa6.08□□□□□ -1.44
NF1-218ENST00000577967 CCDC146Q8IYE0 955 aa6.08□□□□□ -1.44
NF1-218ENST00000577967 MIA2Q96PC5 1412 aa6.08□□□□□ -1.44
NF1-218ENST00000577967 EIF4G3O43432 1585 aaKnown RBP6.08□□□□□ -1.44
NF1-218ENST00000577967 PANK3Q9H999 370 aa6.08□□□□□ -1.44
NF1-218ENST00000577967 FTSJ3Q8IY81 847 aaKnown RBP6.08□□□□□ -1.44
NF1-218ENST00000577967 MYH16Q9H6N6 1097 aa6.08□□□□□ -1.44
NF1-218ENST00000577967 NUTM2FA1L443 756 aa6.07□□□□□ -1.44
NF1-218ENST00000577967 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.07□□□□□ -1.44
NF1-218ENST00000577967 UPF2Q9HAU5 1272 aaKnown RBP6.07□□□□□ -1.44
NF1-218ENST00000577967 B4GALNT3Q6L9W6 998 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms