RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 ADAMTS12P58397 1594 aa12.15□□□□□ -0.46
SMARCE1-212ENST00000577721 ERICH3Q5RHP9 1530 aa12.11□□□□□ -0.47
SMARCE1-212ENST00000577721 SEC24BO95487 1268 aa12.11□□□□□ -0.47
SMARCE1-212ENST00000577721 TOP2BQ02880 1626 aa12.11□□□□□ -0.47
SMARCE1-212ENST00000577721 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
SMARCE1-212ENST00000577721 CCDC61Q9Y6R9 512 aa12.1□□□□□ -0.47
SMARCE1-212ENST00000577721 POTEFA5A3E0 1075 aa12.09□□□□□ -0.47
SMARCE1-212ENST00000577721 TTBK1Q5TCY1 1321 aaPredicted RBP12.08□□□□□ -0.48
SMARCE1-212ENST00000577721 SHROOM2Q13796 1616 aa12.08□□□□□ -0.48
SMARCE1-212ENST00000577721 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
SMARCE1-212ENST00000577721 KIF12Q96FN5 646 aa12.07□□□□□ -0.48
SMARCE1-212ENST00000577721 TIE1P35590 1138 aa12.06□□□□□ -0.48
SMARCE1-212ENST00000577721 ABCC10Q5T3U5 1492 aa12.04□□□□□ -0.48
SMARCE1-212ENST00000577721 IGF1RP08069 1367 aa12.01□□□□□ -0.49
SMARCE1-212ENST00000577721 TRPC6Q9Y210 931 aa11.99□□□□□ -0.49
SMARCE1-212ENST00000577721 KIAA0586Q9BVV6 1533 aa11.99□□□□□ -0.49
SMARCE1-212ENST00000577721 PTPRGP23470 1445 aa11.98□□□□□ -0.49
SMARCE1-212ENST00000577721 KIF27Q86VH2 1401 aa11.98□□□□□ -0.49
SMARCE1-212ENST00000577721 KDM4FA0A1W2PPD8 638 aa11.98□□□□□ -0.49
SMARCE1-212ENST00000577721 MAP3K13O43283 966 aa11.98□□□□□ -0.49
SMARCE1-212ENST00000577721 COLQQ9Y215 455 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-212ENST00000577721 KIF13AQ9H1H9 1805 aa11.97□□□□□ -0.49
SMARCE1-212ENST00000577721 MAPKBP1O60336 1514 aa11.97□□□□□ -0.49
SMARCE1-212ENST00000577721 RUSC2Q8N2Y8 1516 aa11.97□□□□□ -0.49
SMARCE1-212ENST00000577721 ST18O60284 1047 aa11.96□□□□□ -0.49
SMARCE1-212ENST00000577721 SLAIN1Q8ND83 568 aa11.96□□□□□ -0.49
SMARCE1-212ENST00000577721 TTLL13PA6NNM8 815 aa11.95□□□□□ -0.5
SMARCE1-212ENST00000577721 CARMIL1Q5VZK9 1371 aa11.94□□□□□ -0.5
SMARCE1-212ENST00000577721 ADCY10Q96PN6 1610 aa11.94□□□□□ -0.5
SMARCE1-212ENST00000577721 PLEKHG5O94827 1062 aa11.94□□□□□ -0.5
SMARCE1-212ENST00000577721 IER5LQ5T953 404 aa11.94□□□□□ -0.5
SMARCE1-212ENST00000577721 DIP2BQ9P265 1576 aa11.93□□□□□ -0.5
SMARCE1-212ENST00000577721 CARMIL2Q6F5E8 1435 aa11.93□□□□□ -0.5
SMARCE1-212ENST00000577721 TNIKQ9UKE5 1360 aa11.92□□□□□ -0.5
SMARCE1-212ENST00000577721 MMRN1Q13201 1228 aa11.92□□□□□ -0.5
SMARCE1-212ENST00000577721 KDM6BO15054 1643 aa11.92□□□□□ -0.5
SMARCE1-212ENST00000577721 TRIM35Q9UPQ4 493 aa11.9□□□□□ -0.5
SMARCE1-212ENST00000577721 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
SMARCE1-212ENST00000577721 SPNS2Q8IVW8 549 aa11.88□□□□□ -0.51
SMARCE1-212ENST00000577721 ASXL2Q76L83 1435 aa11.87□□□□□ -0.51
SMARCE1-212ENST00000577721 PLB1Q6P1J6 1458 aa11.87□□□□□ -0.51
SMARCE1-212ENST00000577721 CUL7Q14999 1698 aa11.87□□□□□ -0.51
SMARCE1-212ENST00000577721 ABCC2Q92887 1545 aa11.86□□□□□ -0.51
SMARCE1-212ENST00000577721 TSPOAP1O95153 1857 aa11.86□□□□□ -0.51
SMARCE1-212ENST00000577721 UACAQ9BZF9 1416 aa11.85□□□□□ -0.51
SMARCE1-212ENST00000577721 ILDR1Q86SU0 546 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-212ENST00000577721 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-212ENST00000577721 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
SMARCE1-212ENST00000577721 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
SMARCE1-212ENST00000577721 PLCG2P16885 1265 aa11.81□□□□□ -0.52
SMARCE1-212ENST00000577721 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
SMARCE1-212ENST00000577721 UHRF1BP1LA0JNW5 1464 aa11.81□□□□□ -0.52
SMARCE1-212ENST00000577721 IQGAP2Q13576 1575 aa11.8□□□□□ -0.52
SMARCE1-212ENST00000577721 SNPHO15079 494 aa11.8□□□□□ -0.52
SMARCE1-212ENST00000577721 MIER1Q8N108 512 aa11.8□□□□□ -0.52
SMARCE1-212ENST00000577721 KCNH8Q96L42 1107 aa11.79□□□□□ -0.52
SMARCE1-212ENST00000577721 GLI2P10070 1586 aa11.79□□□□□ -0.52
SMARCE1-212ENST00000577721 ADGRL1O94910 1474 aa11.78□□□□□ -0.52
SMARCE1-212ENST00000577721 EPRSP07814 1512 aaKnown RBP11.77□□□□□ -0.52
SMARCE1-212ENST00000577721 DISP1Q96F81 1524 aa11.77□□□□□ -0.52
SMARCE1-212ENST00000577721 TEX14Q8IWB6 1497 aa11.76□□□□□ -0.53
SMARCE1-212ENST00000577721 COL17A1Q9UMD9 1497 aaPredicted RBP11.76□□□□□ -0.53
SMARCE1-212ENST00000577721 RAPGEF2Q9Y4G8 1499 aa11.76□□□□□ -0.53
SMARCE1-212ENST00000577721 FAM9AQ8IZU1 332 aaPredicted RBP11.76□□□□□ -0.53
SMARCE1-212ENST00000577721 KDM5BQ9UGL1 1544 aa11.75□□□□□ -0.53
SMARCE1-212ENST00000577721 PROM2Q8N271 834 aa11.73□□□□□ -0.53
SMARCE1-212ENST00000577721 UGGT2Q9NYU1 1516 aa11.72□□□□□ -0.53
SMARCE1-212ENST00000577721 TMEM106CQ9BVX2 250 aa11.72□□□□□ -0.53
SMARCE1-212ENST00000577721 CD109Q6YHK3 1445 aa11.71□□□□□ -0.53
SMARCE1-212ENST00000577721 ARID3CA6NKF2 412 aa11.71□□□□□ -0.53
SMARCE1-212ENST00000577721 PPRC1Q5VV67 1664 aaKnown RBP11.71□□□□□ -0.54
SMARCE1-212ENST00000577721 WDR7Q9Y4E6 1490 aa11.7□□□□□ -0.54
SMARCE1-212ENST00000577721 MARVELD3Q96A59 401 aa11.7□□□□□ -0.54
SMARCE1-212ENST00000577721 P3H3Q8IVL6 736 aa11.69□□□□□ -0.54
SMARCE1-212ENST00000577721 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-212ENST00000577721 ZCCHC11Q5TAX3 1644 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-212ENST00000577721 KIAA0556O60303 1618 aa11.68□□□□□ -0.54
SMARCE1-212ENST00000577721 MAP3K4Q9Y6R4 1608 aa11.68□□□□□ -0.54
SMARCE1-212ENST00000577721 IFNL1Q8IU54 200 aa11.67□□□□□ -0.54
SMARCE1-212ENST00000577721 GOLGA3Q08378 1498 aa11.67□□□□□ -0.54
SMARCE1-212ENST00000577721 IRX5P78411 483 aaPredicted RBP11.66□□□□□ -0.54
SMARCE1-212ENST00000577721 OCEL1Q9H607 264 aa11.65□□□□□ -0.54
SMARCE1-212ENST00000577721 HECW2Q9P2P5 1572 aa11.64□□□□□ -0.55
SMARCE1-212ENST00000577721 MAGI3Q5TCQ9 1506 aa11.64□□□□□ -0.55
SMARCE1-212ENST00000577721 PLCD3Q8N3E9 789 aa11.63□□□□□ -0.55
SMARCE1-212ENST00000577721 ZBTB47Q9UFB7 747 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-212ENST00000577721 RANGAP1P46060 587 aaPredicted RBP11.61□□□□□ -0.55
SMARCE1-212ENST00000577721 ARID4BQ4LE39 1312 aaPredicted RBP11.6□□□□□ -0.55
SMARCE1-212ENST00000577721 RAPGEF3O95398 923 aa11.6□□□□□ -0.55
SMARCE1-212ENST00000577721 EMP3P54852 163 aa11.6□□□□□ -0.55
SMARCE1-212ENST00000577721 ABCA8O94911 1581 aa11.59□□□□□ -0.55
SMARCE1-212ENST00000577721 FAM212AQ96EL1 285 aa11.58□□□□□ -0.56
SMARCE1-212ENST00000577721 ATP10BO94823 1461 aa11.57□□□□□ -0.56
SMARCE1-212ENST00000577721 PRXQ9BXM0 1461 aa11.57□□□□□ -0.56
SMARCE1-212ENST00000577721 PHLDB1Q86UU1 1377 aa11.56□□□□□ -0.56
SMARCE1-212ENST00000577721 FBXO41Q8TF61 875 aa11.56□□□□□ -0.56
SMARCE1-212ENST00000577721 CFAP43Q8NDM7 1665 aa11.55□□□□□ -0.56
SMARCE1-212ENST00000577721 ARAP3Q8WWN8 1544 aa11.55□□□□□ -0.56
SMARCE1-212ENST00000577721 CTTNBP2Q8WZ74 1663 aa11.53□□□□□ -0.56
SMARCE1-212ENST00000577721 PLEKHD1A6NEE1 506 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms