RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 CERS3Q8IU89 383 aa7.52□□□□□ -1.21
BRIP1-202ENST00000577598 GPIHBP1Q8IV16 184 aa7.52□□□□□ -1.21
BRIP1-202ENST00000577598 CCDC27Q2M243 656 aa7.52□□□□□ -1.21
BRIP1-202ENST00000577598 NOL8Q76FK4 1167 aaKnown RBP7.52□□□□□ -1.21
BRIP1-202ENST00000577598 PABPN1Q86U42 306 aaKnown RBP eCLIP7.51□□□□□ -1.21
BRIP1-202ENST00000577598 POLR3EQ9NVU0 708 aa7.5□□□□□ -1.21
BRIP1-202ENST00000577598 TRAK2O60296 914 aa7.5□□□□□ -1.21
BRIP1-202ENST00000577598 TMED8Q6PL24 325 aaPredicted RBP7.5□□□□□ -1.21
BRIP1-202ENST00000577598 RIOK3O14730 519 aaKnown RBP7.49□□□□□ -1.21
BRIP1-202ENST00000577598 MLLT3P42568 568 aaPredicted RBP7.49□□□□□ -1.21
BRIP1-202ENST00000577598 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.47□□□□□ -1.21
BRIP1-202ENST00000577598 AK7Q96M32 723 aa7.47□□□□□ -1.21
BRIP1-202ENST00000577598 CAPN15O75808 1086 aa7.47□□□□□ -1.21
BRIP1-202ENST00000577598 E2F4Q16254 413 aa7.47□□□□□ -1.21
BRIP1-202ENST00000577598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.47□□□□□ -1.21
BRIP1-202ENST00000577598 HNRNPUL2Q1KMD3 747 aaKnown RBP7.47□□□□□ -1.21
BRIP1-202ENST00000577598 IVNS1ABPQ9Y6Y0 642 aa7.47□□□□□ -1.21
BRIP1-202ENST00000577598 NUTM2FA1L443 756 aa7.46□□□□□ -1.21
BRIP1-202ENST00000577598 NLRP7Q8WX94 980 aa7.46□□□□□ -1.21
BRIP1-202ENST00000577598 CALR3Q96L12 384 aaKnown RBP7.45□□□□□ -1.22
BRIP1-202ENST00000577598 ZNF330Q9Y3S2 320 aaPredicted RBP7.45□□□□□ -1.22
BRIP1-202ENST00000577598 CSPP1Q1MSJ5 1256 aa7.45□□□□□ -1.22
BRIP1-202ENST00000577598 SPINK5Q9NQ38 1064 aaPredicted RBP7.45□□□□□ -1.22
BRIP1-202ENST00000577598 ZMYND10O75800 440 aa7.44□□□□□ -1.22
BRIP1-202ENST00000577598 ABL2P42684 1182 aa7.43□□□□□ -1.22
BRIP1-202ENST00000577598 LARP6Q9BRS8 491 aaKnown RBP7.43□□□□□ -1.22
BRIP1-202ENST00000577598 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.43□□□□□ -1.22
BRIP1-202ENST00000577598 TRIM66O15016 1216 aa7.43□□□□□ -1.22
BRIP1-202ENST00000577598 HOXD11P31277 338 aaPredicted RBP7.43□□□□□ -1.22
BRIP1-202ENST00000577598 FAM9BQ8IZU0 186 aa7.43□□□□□ -1.22
BRIP1-202ENST00000577598 FAM50AQ14320 339 aaKnown RBP7.42□□□□□ -1.22
BRIP1-202ENST00000577598 PROSER2Q86WR7 435 aaPredicted RBP7.42□□□□□ -1.22
BRIP1-202ENST00000577598 C9orf131Q5VYM1 1079 aa7.42□□□□□ -1.22
BRIP1-202ENST00000577598 RSPH4AQ5TD94 716 aa7.41□□□□□ -1.22
BRIP1-202ENST00000577598 OSCARQ8IYS5 282 aa7.4□□□□□ -1.22
BRIP1-202ENST00000577598 GDPD2Q9HCC8 539 aa7.4□□□□□ -1.22
BRIP1-202ENST00000577598 PEX14O75381 377 aa7.4□□□□□ -1.22
BRIP1-202ENST00000577598 GRXCR2A6NFK2 248 aa7.4□□□□□ -1.23
BRIP1-202ENST00000577598 FLIIQ13045 1269 aa7.39□□□□□ -1.23
BRIP1-202ENST00000577598 DNAJC2Q99543 621 aaKnown RBP7.39□□□□□ -1.23
BRIP1-202ENST00000577598 ANKRD62A6NC57 917 aa7.38□□□□□ -1.23
BRIP1-202ENST00000577598 ACIN1Q9UKV3 1341 aaKnown RBP7.38□□□□□ -1.23
BRIP1-202ENST00000577598 PDE6BP35913 854 aa7.37□□□□□ -1.23
BRIP1-202ENST00000577598 PLEKHG3A1L390 1219 aa7.37□□□□□ -1.23
BRIP1-202ENST00000577598 UNCXA6NJT0 531 aa7.37□□□□□ -1.23
BRIP1-202ENST00000577598 BARGINQ6ZT62 677 aa7.37□□□□□ -1.23
BRIP1-202ENST00000577598 PROM2Q8N271 834 aa7.36□□□□□ -1.23
BRIP1-202ENST00000577598 NAP1L5Q96NT1 182 aaPredicted RBP7.36□□□□□ -1.23
BRIP1-202ENST00000577598 MCM6Q14566 821 aa7.35□□□□□ -1.23
BRIP1-202ENST00000577598 VTI1AQ96AJ9 217 aa7.35□□□□□ -1.23
BRIP1-202ENST00000577598 TESPA1A2RU30 521 aaPredicted RBP7.35□□□□□ -1.23
BRIP1-202ENST00000577598 PPP1R37O75864 691 aa7.35□□□□□ -1.23
BRIP1-202ENST00000577598 TMX4Q9H1E5 349 aaPredicted RBP7.35□□□□□ -1.23
BRIP1-202ENST00000577598 DMRT2Q9Y5R5 561 aa7.35□□□□□ -1.23
BRIP1-202ENST00000577598 FOXD4L6Q3SYB3 417 aaPredicted RBP7.34□□□□□ -1.23
BRIP1-202ENST00000577598 FOXD4L3Q6VB84 417 aaPredicted RBP7.34□□□□□ -1.23
BRIP1-202ENST00000577598 MRRFQ96E11 262 aaKnown RBP7.34□□□□□ -1.23
BRIP1-202ENST00000577598 VGFO15240 615 aaPredicted RBP7.34□□□□□ -1.24
BRIP1-202ENST00000577598 BRD1O95696 1058 aa7.34□□□□□ -1.24
BRIP1-202ENST00000577598 SMYD5Q6GMV2 418 aa7.34□□□□□ -1.24
BRIP1-202ENST00000577598 PARP9Q8IXQ6 854 aa7.34□□□□□ -1.24
BRIP1-202ENST00000577598 SERPINA10Q9UK55 444 aa7.33□□□□□ -1.24
BRIP1-202ENST00000577598 POM121CA8CG34 1229 aa7.33□□□□□ -1.24
BRIP1-202ENST00000577598 ZNF662Q6ZS27 426 aa7.33□□□□□ -1.24
BRIP1-202ENST00000577598 PROCA1Q8NCQ7 364 aaPredicted RBP7.33□□□□□ -1.24
BRIP1-202ENST00000577598 PCMTD1Q96MG8 357 aaPredicted RBP7.33□□□□□ -1.24
BRIP1-202ENST00000577598 BIN2Q9UBW5 565 aaPredicted RBP7.33□□□□□ -1.24
BRIP1-202ENST00000577598 SCNN1AP37088 669 aa7.33□□□□□ -1.24
BRIP1-202ENST00000577598 CCER1Q8TC90 406 aaPredicted RBP7.33□□□□□ -1.24
BRIP1-202ENST00000577598 GIPC2Q8TF65 315 aa7.32□□□□□ -1.24
BRIP1-202ENST00000577598 TSC1Q92574 1164 aa7.32□□□□□ -1.24
BRIP1-202ENST00000577598 TRAIPQ9BWF2 469 aa7.32□□□□□ -1.24
BRIP1-202ENST00000577598 CCDC102AQ96A19 550 aa7.32□□□□□ -1.24
BRIP1-202ENST00000577598 PKNOX2Q96KN3 472 aa7.31□□□□□ -1.24
BRIP1-202ENST00000577598 CLEC11AQ9Y240 323 aa7.31□□□□□ -1.24
BRIP1-202ENST00000577598 LGR5O75473 907 aa7.31□□□□□ -1.24
BRIP1-202ENST00000577598 SKIV2LQ15477 1246 aaKnown RBP7.3□□□□□ -1.24
BRIP1-202ENST00000577598 ARHGEF1Q92888 912 aaKnown RBP7.3□□□□□ -1.24
BRIP1-202ENST00000577598 MARCH6O60337 910 aa7.3□□□□□ -1.24
BRIP1-202ENST00000577598 FECHP22830 423 aa7.3□□□□□ -1.24
BRIP1-202ENST00000577598 DDRGK1Q96HY6 314 aa7.29□□□□□ -1.24
BRIP1-202ENST00000577598 SNRKQ9NRH2 765 aa7.29□□□□□ -1.24
BRIP1-202ENST00000577598 CSB-PGBD3P0DP91 1061 aa7.29□□□□□ -1.24
BRIP1-202ENST00000577598 TSPYL2Q9H2G4 693 aaPredicted RBP7.29□□□□□ -1.24
BRIP1-202ENST00000577598 RBM27Q9P2N5 1060 aaKnown RBP7.29□□□□□ -1.24
BRIP1-202ENST00000577598 TSNAXIP1Q2TAA8 658 aa7.28□□□□□ -1.24
BRIP1-202ENST00000577598 FAM212AQ96EL1 285 aa7.28□□□□□ -1.24
BRIP1-202ENST00000577598 PRDM16Q9HAZ2 1276 aa7.28□□□□□ -1.24
BRIP1-202ENST00000577598 PCDHB8Q9UN66 801 aa7.27□□□□□ -1.24
BRIP1-202ENST00000577598 PCDHB13Q9Y5F0 798 aa7.27□□□□□ -1.24
BRIP1-202ENST00000577598 DPYSL4O14531 572 aa7.27□□□□□ -1.25
BRIP1-202ENST00000577598 ZBTB47Q9UFB7 747 aaPredicted RBP7.27□□□□□ -1.25
BRIP1-202ENST00000577598 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.27□□□□□ -1.25
BRIP1-202ENST00000577598 FAM161AQ3B820 660 aa7.27□□□□□ -1.25
BRIP1-202ENST00000577598 CENPBP07199 599 aaPredicted RBP7.26□□□□□ -1.25
BRIP1-202ENST00000577598 TAGLNQ01995 201 aaKnown RBP7.26□□□□□ -1.25
BRIP1-202ENST00000577598 G3BP2Q9UN86 482 aaKnown RBP7.26□□□□□ -1.25
BRIP1-202ENST00000577598 IQSEC3Q9UPP2 1182 aaPredicted RBP7.26□□□□□ -1.25
BRIP1-202ENST00000577598 GLMNQ92990 594 aa7.26□□□□□ -1.25
BRIP1-202ENST00000577598 RYDENQ9NUL5 291 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms