RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 MTUS2Q5JR59 1369 aa42.02■■■■■ 4.32
PPP4R1-204ENST00000577393 VPS8Q8N3P4 1428 aa42.02■■■■■ 4.32
PPP4R1-204ENST00000577393 CDC42BPBQ9Y5S2 1711 aa42■■■■■ 4.31
PPP4R1-204ENST00000577393 PREX2Q70Z35 1606 aa41.97■■■■■ 4.31
PPP4R1-204ENST00000577393 POGZQ7Z3K3 1410 aa41.95■■■■■ 4.31
PPP4R1-204ENST00000577393 CDC42BPAQ5VT25 1732 aa41.92■■■■■ 4.3
PPP4R1-204ENST00000577393 ZMYM4Q5VZL5 1548 aa41.91■■■■■ 4.3
PPP4R1-204ENST00000577393 EHBP1L1Q8N3D4 1523 aa41.89■■■■■ 4.3
PPP4R1-204ENST00000577393 GPATCH8Q9UKJ3 1502 aaKnown RBP41.89■■■■■ 4.3
PPP4R1-204ENST00000577393 ARHGEF40Q8TER5 1519 aa41.85■■■■■ 4.29
PPP4R1-204ENST00000577393 CCNB3Q8WWL7 1395 aa41.84■■■■■ 4.29
PPP4R1-204ENST00000577393 MAGI2Q86UL8 1455 aa41.83■■■■■ 4.29
PPP4R1-204ENST00000577393 TIAM1Q13009 1591 aa41.82■■■■■ 4.29
PPP4R1-204ENST00000577393 YEATS2Q9ULM3 1422 aa41.81■■■■■ 4.28
PPP4R1-204ENST00000577393 AFAP1Q8N556 730 aa41.81■■■■■ 4.28
PPP4R1-204ENST00000577393 ZFYVE16Q7Z3T8 1539 aa41.8■■■■■ 4.28
PPP4R1-204ENST00000577393 ZNF518AQ6AHZ1 1483 aa41.8■■■■■ 4.28
PPP4R1-204ENST00000577393 ZNF777Q9ULD5 760 aaPredicted RBP41.79■■■■■ 4.28
PPP4R1-204ENST00000577393 ABCC1P33527 1531 aa41.78■■■■■ 4.28
PPP4R1-204ENST00000577393 CFDP1Q9UEE9 299 aaPredicted RBP41.77■■■■■ 4.28
PPP4R1-204ENST00000577393 ARHGEF12Q9NZN5 1544 aa41.77■■■■■ 4.28
PPP4R1-204ENST00000577393 ARID4BQ4LE39 1312 aaPredicted RBP41.74■■■■■ 4.27
PPP4R1-204ENST00000577393 TRAPPC8Q9Y2L5 1435 aa41.72■■■■■ 4.27
PPP4R1-204ENST00000577393 KDM5CP41229 1560 aa41.71■■■■■ 4.27
PPP4R1-204ENST00000577393 SAMD9LQ8IVG5 1584 aa41.71■■■■■ 4.27
PPP4R1-204ENST00000577393 ITSN2Q9NZM3 1697 aa41.7■■■■■ 4.27
PPP4R1-204ENST00000577393 LRRC9Q6ZRR7 1453 aa41.67■■■■■ 4.26
PPP4R1-204ENST00000577393 MAP3K1Q13233 1512 aa41.67■■■■■ 4.26
PPP4R1-204ENST00000577393 SUPT6HQ7KZ85 1726 aaKnown RBP41.66■■■■■ 4.26
PPP4R1-204ENST00000577393 NCOA2Q15596 1464 aa41.66■■■■■ 4.26
PPP4R1-204ENST00000577393 MYT1LQ9UL68 1186 aa41.64■■■■■ 4.26
PPP4R1-204ENST00000577393 ATP10AO60312 1499 aa41.62■■■■■ 4.25
PPP4R1-204ENST00000577393 HNRNPMP52272 730 aaKnown RBP eCLIP41.62■■■■■ 4.254e-6■■■■□ 23.6
PPP4R1-204ENST00000577393 KANK4Q5T7N3 995 aaPredicted RBP41.62■■■■■ 4.25
PPP4R1-204ENST00000577393 SYCP2Q9BX26 1530 aa41.61■■■■■ 4.25
PPP4R1-204ENST00000577393 HECW2Q9P2P5 1572 aa41.61■■■■■ 4.25
PPP4R1-204ENST00000577393 BCORL1Q5H9F3 1711 aa41.6■■■■■ 4.25
PPP4R1-204ENST00000577393 KIAA1107Q9UPP5 1409 aa41.6■■■■■ 4.25
PPP4R1-204ENST00000577393 PLEKHH2Q8IVE3 1493 aa41.6■■■■■ 4.25
PPP4R1-204ENST00000577393 MLH3Q9UHC1 1453 aa41.6■■■■■ 4.25
PPP4R1-204ENST00000577393 ADAMTSL3P82987 1691 aa41.58■■■■■ 4.25
PPP4R1-204ENST00000577393 SIGLEC1Q9BZZ2 1709 aa41.58■■■■■ 4.25
PPP4R1-204ENST00000577393 C9orf84Q5VXU9 1444 aa41.56■■■■■ 4.24
PPP4R1-204ENST00000577393 ZNF644Q9H582 1327 aaPredicted RBP41.56■■■■■ 4.24
PPP4R1-204ENST00000577393 APLP2Q06481 763 aa41.54■■■■■ 4.24
PPP4R1-204ENST00000577393 DIP2CQ9Y2E4 1556 aa41.5■■■■■ 4.23
PPP4R1-204ENST00000577393 ABCA6Q8N139 1617 aa41.47■■■■■ 4.23
PPP4R1-204ENST00000577393 SPAG9O60271 1321 aaKnown RBP41.46■■■■■ 4.23
PPP4R1-204ENST00000577393 KIDINS220Q9ULH0 1771 aa41.46■■■■■ 4.23
PPP4R1-204ENST00000577393 MLECQ14165 292 aa41.45■■■■■ 4.23
PPP4R1-204ENST00000577393 MADDQ8WXG6 1647 aa41.44■■■■■ 4.22
PPP4R1-204ENST00000577393 PTPRMP28827 1452 aa41.41■■■■■ 4.22
PPP4R1-204ENST00000577393 MBD5Q9P267 1494 aa41.41■■■■■ 4.22
PPP4R1-204ENST00000577393 REREQ9P2R6 1566 aa41.38■■■■■ 4.22
PPP4R1-204ENST00000577393 CAMSAP2Q08AD1 1489 aa41.37■■■■■ 4.21
PPP4R1-204ENST00000577393 ATP7AQ04656 1500 aa41.34■■■■■ 4.21
PPP4R1-204ENST00000577393 RIMS1Q86UR5 1692 aaKnown RBP41.32■■■■■ 4.2
PPP4R1-204ENST00000577393 INO80Q9ULG1 1556 aaPredicted RBP41.31■■■■■ 4.2
PPP4R1-204ENST00000577393 MYOM3Q5VTT5 1437 aa41.3■■■■■ 4.2
PPP4R1-204ENST00000577393 AGLP35573 1532 aa41.28■■■■■ 4.2
PPP4R1-204ENST00000577393 RSPH4AQ5TD94 716 aa41.26■■■■■ 4.2
PPP4R1-204ENST00000577393 CCDC141Q6ZP82 1450 aa41.25■■■■■ 4.19
PPP4R1-204ENST00000577393 MIA2Q96PC5 1412 aa41.25■■■■■ 4.19
PPP4R1-204ENST00000577393 FER1L4A9Z1Z3 1794 aa41.23■■■■■ 4.19
PPP4R1-204ENST00000577393 RTEL1-TNFRSF6BF6WH68 1400 aa41.21■■■■■ 4.19
PPP4R1-204ENST00000577393 ARHGEF5Q12774 1597 aa41.18■■■■■ 4.18
PPP4R1-204ENST00000577393 A2MP01023 1474 aa41.17■■■■■ 4.18
PPP4R1-204ENST00000577393 PLPPR3Q6T4P5 718 aa41.17■■■■■ 4.18
PPP4R1-204ENST00000577393 TSPY4P0CV99 314 aa41.11■■■■■ 4.17
PPP4R1-204ENST00000577393 TSPY10P0CW01 314 aa41.11■■■■■ 4.17
PPP4R1-204ENST00000577393 PLXNC1O60486 1568 aa41.11■■■■■ 4.17
PPP4R1-204ENST00000577393 ADGBQ8N7X0 1667 aa41.1■■■■■ 4.17
PPP4R1-204ENST00000577393 FGD6Q6ZV73 1430 aa41.03■■■■■ 4.16
PPP4R1-204ENST00000577393 CEBPAP49715 358 aaPredicted RBP41.03■■■■■ 4.16
PPP4R1-204ENST00000577393 ESF1Q9H501 851 aaKnown RBP41.03■■■■■ 4.16
PPP4R1-204ENST00000577393 PTPN23Q9H3S7 1636 aa41.03■■■■■ 4.16
PPP4R1-204ENST00000577393 DHX29Q7Z478 1369 aaKnown RBP41.02■■■■■ 4.16
PPP4R1-204ENST00000577393 MAST1Q9Y2H9 1570 aa40.96■■■■■ 4.15
PPP4R1-204ENST00000577393 GGT6Q6P531 493 aa40.96■■■■■ 4.15
PPP4R1-204ENST00000577393 TCOF1Q13428 1488 aaKnown RBP40.95■■■■■ 4.15
PPP4R1-204ENST00000577393 CNTLNQ9NXG0 1405 aa40.93■■■■■ 4.14
PPP4R1-204ENST00000577393 LMTK3Q96Q04 1460 aa40.9■■■■■ 4.14
PPP4R1-204ENST00000577393 ABCC5O15440 1437 aa40.9■■■■■ 4.14
PPP4R1-204ENST00000577393 KIF3BO15066 747 aa40.88■■■■■ 4.13
PPP4R1-204ENST00000577393 C3P01024 1663 aa40.86■■■■■ 4.13
PPP4R1-204ENST00000577393 PPP6R1Q9UPN7 881 aa40.84■■■■■ 4.13
PPP4R1-204ENST00000577393 DAPK1P53355 1430 aa40.84■■■■■ 4.13
PPP4R1-204ENST00000577393 PPARGC1BQ86YN6 1023 aaKnown RBP40.82■■■■■ 4.13
PPP4R1-204ENST00000577393 SHANK2Q9UPX8 1470 aa40.82■■■■■ 4.12
PPP4R1-204ENST00000577393 ZMYM3Q14202 1370 aa40.81■■■■■ 4.12
PPP4R1-204ENST00000577393 DNMT1P26358 1616 aaKnown RBP40.81■■■■■ 4.12
PPP4R1-204ENST00000577393 MROH2AA6NES4 1674 aa40.79■■■■■ 4.12
PPP4R1-204ENST00000577393 CROCC2H7BZ55 1655 aa40.79■■■■■ 4.12
PPP4R1-204ENST00000577393 CLTCQ00610 1675 aaKnown RBP40.78■■■■■ 4.12
PPP4R1-204ENST00000577393 FAM50AQ14320 339 aaKnown RBP40.78■■■■■ 4.12
PPP4R1-204ENST00000577393 SETD1BQ9UPS6 1966 aaKnown RBP40.75■■■■■ 4.11
PPP4R1-204ENST00000577393 HSPA2P54652 639 aa40.74■■■■■ 4.11
PPP4R1-204ENST00000577393 PREX1Q8TCU6 1659 aa40.72■■■■■ 4.11
PPP4R1-204ENST00000577393 RRP7BPQ9NSQ0 103 aa40.71■■■■■ 4.11
PPP4R1-204ENST00000577393 KIF15Q9NS87 1388 aa40.71■■■■■ 4.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms