RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 CCDC61Q9Y6R9 512 aa10.91□□□□□ -0.66
NUP88-212ENST00000576708 SHROOM2Q13796 1616 aa10.91□□□□□ -0.66
NUP88-212ENST00000576708 RNF25Q96BH1 459 aaPredicted RBP10.9□□□□□ -0.66
NUP88-212ENST00000576708 PRG4Q92954 1404 aaPredicted RBP10.88□□□□□ -0.67
NUP88-212ENST00000576708 JPH4Q96JJ6 628 aa10.88□□□□□ -0.67
NUP88-212ENST00000576708 CHRM1P11229 460 aaPredicted RBP10.86□□□□□ -0.67
NUP88-212ENST00000576708 IGF1RP08069 1367 aa10.86□□□□□ -0.67
NUP88-212ENST00000576708 POTEIP0CG38 1075 aa10.85□□□□□ -0.67
NUP88-212ENST00000576708 PHF12Q96QT6 1004 aa10.85□□□□□ -0.67
NUP88-212ENST00000576708 RUSC2Q8N2Y8 1516 aa10.84□□□□□ -0.67
NUP88-212ENST00000576708 KIF27Q86VH2 1401 aa10.83□□□□□ -0.68
NUP88-212ENST00000576708 RIOK3O14730 519 aaKnown RBP10.82□□□□□ -0.68
NUP88-212ENST00000576708 PCDHB8Q9UN66 801 aa10.81□□□□□ -0.68
NUP88-212ENST00000576708 PCDHB13Q9Y5F0 798 aa10.81□□□□□ -0.68
NUP88-212ENST00000576708 MAP3K13O43283 966 aa10.8□□□□□ -0.68
NUP88-212ENST00000576708 KIF12Q96FN5 646 aa10.79□□□□□ -0.68
NUP88-212ENST00000576708 KIAA0586Q9BVV6 1533 aa10.79□□□□□ -0.68
NUP88-212ENST00000576708 CHGAP10645 457 aaKnown RBP10.78□□□□□ -0.68
NUP88-212ENST00000576708 CUL7Q14999 1698 aa10.78□□□□□ -0.68
NUP88-212ENST00000576708 TTBK1Q5TCY1 1321 aaPredicted RBP10.78□□□□□ -0.68
NUP88-212ENST00000576708 CARMIL1Q5VZK9 1371 aa10.77□□□□□ -0.68
NUP88-212ENST00000576708 ZNF579Q8NAF0 562 aaKnown RBP10.76□□□□□ -0.69
NUP88-212ENST00000576708 IFNL1Q8IU54 200 aa10.75□□□□□ -0.69
NUP88-212ENST00000576708 ADCY10Q96PN6 1610 aa10.75□□□□□ -0.69
NUP88-212ENST00000576708 KIF13AQ9H1H9 1805 aa10.74□□□□□ -0.69
NUP88-212ENST00000576708 FAM69CQ0P6D2 419 aa10.74□□□□□ -0.69
NUP88-212ENST00000576708 ZNF467Q7Z7K2 595 aaPredicted RBP10.74□□□□□ -0.69
NUP88-212ENST00000576708 VGFO15240 615 aaPredicted RBP10.73□□□□□ -0.69
NUP88-212ENST00000576708 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.72□□□□□ -0.69
NUP88-212ENST00000576708 ZFP91Q96JP5 570 aaPredicted RBP10.72□□□□□ -0.69
NUP88-212ENST00000576708 PTPRGP23470 1445 aa10.71□□□□□ -0.69
NUP88-212ENST00000576708 ABCC10Q5T3U5 1492 aa10.71□□□□□ -0.69
NUP88-212ENST00000576708 STK25O00506 426 aa10.7□□□□□ -0.7
NUP88-212ENST00000576708 MS4A3Q96HJ5 214 aa10.7□□□□□ -0.7
NUP88-212ENST00000576708 TAOK2Q9UL54 1235 aa10.7□□□□□ -0.7
NUP88-212ENST00000576708 MAPKBP1O60336 1514 aa10.69□□□□□ -0.7
NUP88-212ENST00000576708 SGIP1Q9BQI5 828 aa10.69□□□□□ -0.7
NUP88-212ENST00000576708 DIP2BQ9P265 1576 aa10.69□□□□□ -0.7
NUP88-212ENST00000576708 TNIKQ9UKE5 1360 aa10.68□□□□□ -0.7
NUP88-212ENST00000576708 HS6ST3Q8IZP7 471 aa10.68□□□□□ -0.7
NUP88-212ENST00000576708 IQGAP2Q13576 1575 aa10.68□□□□□ -0.7
NUP88-212ENST00000576708 PSEN1P49768 467 aa10.67□□□□□ -0.7
NUP88-212ENST00000576708 PDAP1Q13442 181 aaKnown RBP10.67□□□□□ -0.7
NUP88-212ENST00000576708 BCL11BQ9C0K0 894 aaPredicted RBP10.67□□□□□ -0.7
NUP88-212ENST00000576708 STK24Q9Y6E0 443 aa10.67□□□□□ -0.7
NUP88-212ENST00000576708 CARMIL2Q6F5E8 1435 aa10.67□□□□□ -0.7
NUP88-212ENST00000576708 PLSCR2Q9NRY7 297 aa10.66□□□□□ -0.7
NUP88-212ENST00000576708 TRPC6Q9Y210 931 aa10.66□□□□□ -0.7
NUP88-212ENST00000576708 DISP1Q96F81 1524 aa10.66□□□□□ -0.7
NUP88-212ENST00000576708 RAPGEF2Q9Y4G8 1499 aa10.66□□□□□ -0.7
NUP88-212ENST00000576708 BBXQ8WY36 941 aaPredicted RBP10.65□□□□□ -0.7
NUP88-212ENST00000576708 GALR2O43603 387 aaPredicted RBP10.64□□□□□ -0.71
NUP88-212ENST00000576708 TSPOAP1O95153 1857 aa10.63□□□□□ -0.71
NUP88-212ENST00000576708 ABCC2Q92887 1545 aa10.63□□□□□ -0.71
NUP88-212ENST00000576708 UACAQ9BZF9 1416 aa10.62□□□□□ -0.71
NUP88-212ENST00000576708 ASXL2Q76L83 1435 aa10.61□□□□□ -0.71
NUP88-212ENST00000576708 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.61□□□□□ -0.71
NUP88-212ENST00000576708 UGGT2Q9NYU1 1516 aa10.61□□□□□ -0.71
NUP88-212ENST00000576708 UHRF1BP1LA0JNW5 1464 aa10.6□□□□□ -0.71
NUP88-212ENST00000576708 KIAA0556O60303 1618 aa10.59□□□□□ -0.71
NUP88-212ENST00000576708 NKX1-1Q15270 411 aaPredicted RBP10.59□□□□□ -0.71
NUP88-212ENST00000576708 KDM6BO15054 1643 aa10.58□□□□□ -0.72
NUP88-212ENST00000576708 CLCN6P51797 869 aa10.58□□□□□ -0.72
NUP88-212ENST00000576708 PAXIP1Q6ZW49 1069 aaPredicted RBP10.58□□□□□ -0.72
NUP88-212ENST00000576708 CFAP44Q96MT7 982 aa10.58□□□□□ -0.72
NUP88-212ENST00000576708 PLB1Q6P1J6 1458 aa10.57□□□□□ -0.72
NUP88-212ENST00000576708 PLCB2Q00722 1185 aa10.57□□□□□ -0.72
NUP88-212ENST00000576708 TMEM106CQ9BVX2 250 aa10.57□□□□□ -0.72
NUP88-212ENST00000576708 PRXQ9BXM0 1461 aa10.56□□□□□ -0.72
NUP88-212ENST00000576708 CABP2Q9NPB3 220 aa10.56□□□□□ -0.72
NUP88-212ENST00000576708 KDM5BQ9UGL1 1544 aa10.56□□□□□ -0.72
NUP88-212ENST00000576708 ZCCHC11Q5TAX3 1644 aaKnown RBP10.55□□□□□ -0.72
NUP88-212ENST00000576708 PPRC1Q5VV67 1664 aaKnown RBP10.55□□□□□ -0.72
NUP88-212ENST00000576708 CTTNBP2Q8WZ74 1663 aa10.55□□□□□ -0.72
NUP88-212ENST00000576708 GLI2P10070 1586 aa10.55□□□□□ -0.72
NUP88-212ENST00000576708 EPRSP07814 1512 aaKnown RBP10.54□□□□□ -0.72
NUP88-212ENST00000576708 KDM4FA0A1W2PPD8 638 aa10.54□□□□□ -0.72
NUP88-212ENST00000576708 P3H3Q8IVL6 736 aa10.54□□□□□ -0.72
NUP88-212ENST00000576708 DCBLD2Q96PD2 775 aa10.54□□□□□ -0.72
NUP88-212ENST00000576708 ARID3CA6NKF2 412 aa10.52□□□□□ -0.73
NUP88-212ENST00000576708 TTLL13PA6NNM8 815 aa10.52□□□□□ -0.73
NUP88-212ENST00000576708 BMP2KQ9NSY1 1161 aaPredicted RBP10.52□□□□□ -0.73
NUP88-212ENST00000576708 COL17A1Q9UMD9 1497 aaPredicted RBP10.52□□□□□ -0.73
NUP88-212ENST00000576708 GOLGA3Q08378 1498 aa10.51□□□□□ -0.73
NUP88-212ENST00000576708 TIE1P35590 1138 aa10.51□□□□□ -0.73
NUP88-212ENST00000576708 EFCAB3Q8N7B9 438 aa10.51□□□□□ -0.73
NUP88-212ENST00000576708 SPRYD3Q8NCJ5 442 aa10.51□□□□□ -0.73
NUP88-212ENST00000576708 SLC24A1O60721 1099 aa10.5□□□□□ -0.73
NUP88-212ENST00000576708 OTUD5Q96G74 571 aa10.5□□□□□ -0.73
NUP88-212ENST00000576708 KCNH8Q96L42 1107 aa10.5□□□□□ -0.73
NUP88-212ENST00000576708 ABCA8O94911 1581 aa10.5□□□□□ -0.73
NUP88-212ENST00000576708 MAP3K4Q9Y6R4 1608 aa10.5□□□□□ -0.73
NUP88-212ENST00000576708 FAM9AQ8IZU1 332 aaPredicted RBP10.49□□□□□ -0.73
NUP88-212ENST00000576708 WDR7Q9Y4E6 1490 aa10.49□□□□□ -0.73
NUP88-212ENST00000576708 POTEB2H3BUK9 544 aa10.48□□□□□ -0.73
NUP88-212ENST00000576708 RANGAP1P46060 587 aaPredicted RBP10.48□□□□□ -0.73
NUP88-212ENST00000576708 HAP1P54257 671 aaPredicted RBP10.48□□□□□ -0.73
NUP88-212ENST00000576708 GOLGA2Q08379 1002 aa10.48□□□□□ -0.73
NUP88-212ENST00000576708 GTPBP6O43824 516 aaPredicted RBP10.47□□□□□ -0.73
NUP88-212ENST00000576708 ATN1P54259 1190 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms