RNA–Protein interactions for RNA: ENST00000576460.5

NOMO3-216, Transcript of NODAL modulator 3, humanhuman

TSL 5

Gene NOMO3, Length 516 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOMO3-216ENST00000576460 GPATCH8Q9UKJ3 1502 aaKnown RBP12.33□□□□□ -0.44
NOMO3-216ENST00000576460 CFDP1Q9UEE9 299 aaPredicted RBP12.33□□□□□ -0.44
NOMO3-216ENST00000576460 CDC42BPAQ5VT25 1732 aa12.32□□□□□ -0.44
NOMO3-216ENST00000576460 TCOF1Q13428 1488 aaKnown RBP12.32□□□□□ -0.44
NOMO3-216ENST00000576460 ITGAEP38570 1179 aa12.31□□□□□ -0.44
NOMO3-216ENST00000576460 WDR7Q9Y4E6 1490 aa12.3□□□□□ -0.44
NOMO3-216ENST00000576460 CNKSR2Q8WXI2 1034 aa12.3□□□□□ -0.44
NOMO3-216ENST00000576460 ASXL2Q76L83 1435 aa12.29□□□□□ -0.44
NOMO3-216ENST00000576460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.28□□□□□ -0.44
NOMO3-216ENST00000576460 MYO5CQ9NQX4 1742 aa12.28□□□□□ -0.44
NOMO3-216ENST00000576460 CDC42BPBQ9Y5S2 1711 aa12.28□□□□□ -0.44
NOMO3-216ENST00000576460 ZNF777Q9ULD5 760 aaPredicted RBP12.27□□□□□ -0.45
NOMO3-216ENST00000576460 RSPH4AQ5TD94 716 aa12.26□□□□□ -0.45
NOMO3-216ENST00000576460 EFCAB2Q5VUJ9 269 aa12.26□□□□□ -0.45
NOMO3-216ENST00000576460 PREX2Q70Z35 1606 aa12.26□□□□□ -0.45
NOMO3-216ENST00000576460 ZNF644Q9H582 1327 aaPredicted RBP12.25□□□□□ -0.45
NOMO3-216ENST00000576460 PLCH2O75038 1416 aa12.25□□□□□ -0.45
NOMO3-216ENST00000576460 TTC37Q6PGP7 1564 aa12.25□□□□□ -0.45
NOMO3-216ENST00000576460 HRCP23327 699 aa12.24□□□□□ -0.45
NOMO3-216ENST00000576460 ABCA9Q8IUA7 1624 aa12.23□□□□□ -0.45
NOMO3-216ENST00000576460 MAPKBP1O60336 1514 aa12.23□□□□□ -0.45
NOMO3-216ENST00000576460 CAMSAP2Q08AD1 1489 aa12.23□□□□□ -0.45
NOMO3-216ENST00000576460 ARHGAP5Q13017 1502 aa12.22□□□□□ -0.45
NOMO3-216ENST00000576460 ARAP3Q8WWN8 1544 aa12.22□□□□□ -0.45
NOMO3-216ENST00000576460 SETD5Q9C0A6 1442 aa12.22□□□□□ -0.45
NOMO3-216ENST00000576460 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
NOMO3-216ENST00000576460 PLEKHH2Q8IVE3 1493 aa12.21□□□□□ -0.45
NOMO3-216ENST00000576460 ABCC5O15440 1437 aa12.2□□□□□ -0.46
NOMO3-216ENST00000576460 DAPK1P53355 1430 aa12.2□□□□□ -0.46
NOMO3-216ENST00000576460 PTPRKQ15262 1439 aa12.2□□□□□ -0.46
NOMO3-216ENST00000576460 SCAF1Q9H7N4 1312 aaKnown RBP12.2□□□□□ -0.46
NOMO3-216ENST00000576460 TSPY4P0CV99 314 aa12.2□□□□□ -0.46
NOMO3-216ENST00000576460 TSPY10P0CW01 314 aa12.2□□□□□ -0.46
NOMO3-216ENST00000576460 KIAA1107Q9UPP5 1409 aa12.2□□□□□ -0.46
NOMO3-216ENST00000576460 ACIN1Q9UKV3 1341 aaKnown RBP12.19□□□□□ -0.46
NOMO3-216ENST00000576460 SLC24A1O60721 1099 aa12.19□□□□□ -0.46
NOMO3-216ENST00000576460 HNRNPMP52272 730 aaKnown RBP eCLIP12.19□□□□□ -0.46
NOMO3-216ENST00000576460 CHIC2Q9UKJ5 165 aa12.19□□□□□ -0.46
NOMO3-216ENST00000576460 ROCK1Q13464 1354 aa12.18□□□□□ -0.46
NOMO3-216ENST00000576460 ARHGEF5Q12774 1597 aa12.18□□□□□ -0.46
NOMO3-216ENST00000576460 SAMD9LQ8IVG5 1584 aa12.18□□□□□ -0.46
NOMO3-216ENST00000576460 CCER1Q8TC90 406 aaPredicted RBP12.18□□□□□ -0.46
NOMO3-216ENST00000576460 ZEB1P37275 1124 aaPredicted RBP12.17□□□□□ -0.46
NOMO3-216ENST00000576460 HFM1A2PYH4 1435 aa12.17□□□□□ -0.46
NOMO3-216ENST00000576460 CD109Q6YHK3 1445 aa12.17□□□□□ -0.46
NOMO3-216ENST00000576460 AKNAQ7Z591 1439 aa12.17□□□□□ -0.46
NOMO3-216ENST00000576460 MBD5Q9P267 1494 aa12.16□□□□□ -0.46
NOMO3-216ENST00000576460 RRP7BPQ9NSQ0 103 aa12.16□□□□□ -0.46
NOMO3-216ENST00000576460 GLI2P10070 1586 aa12.16□□□□□ -0.46
NOMO3-216ENST00000576460 RAB3GAP2Q9H2M9 1393 aa12.16□□□□□ -0.46
NOMO3-216ENST00000576460 NAIPQ13075 1403 aa12.15□□□□□ -0.46
NOMO3-216ENST00000576460 DNAJC5Q9H3Z4 198 aa12.15□□□□□ -0.46
NOMO3-216ENST00000576460 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.46
NOMO3-216ENST00000576460 CROCC2H7BZ55 1655 aa12.15□□□□□ -0.46
NOMO3-216ENST00000576460 ADGBQ8N7X0 1667 aa12.15□□□□□ -0.46
NOMO3-216ENST00000576460 ANKRD30AQ9BXX3 1397 aa12.14□□□□□ -0.47
NOMO3-216ENST00000576460 FANCAO15360 1455 aa12.14□□□□□ -0.47
NOMO3-216ENST00000576460 CCDC141Q6ZP82 1450 aa12.14□□□□□ -0.47
NOMO3-216ENST00000576460 SHANK2Q9UPX8 1470 aa12.14□□□□□ -0.47
NOMO3-216ENST00000576460 NCOA1Q15788 1441 aa12.13□□□□□ -0.47
NOMO3-216ENST00000576460 FAM69CQ0P6D2 419 aa12.13□□□□□ -0.47
NOMO3-216ENST00000576460 ADGRL2O95490 1459 aa12.13□□□□□ -0.47
NOMO3-216ENST00000576460 CFAP74Q9C0B2 1584 aa12.13□□□□□ -0.47
NOMO3-216ENST00000576460 GCC2Q8IWJ2 1684 aa12.13□□□□□ -0.47
NOMO3-216ENST00000576460 SYCP2Q9BX26 1530 aa12.12□□□□□ -0.47
NOMO3-216ENST00000576460 C9orf84Q5VXU9 1444 aa12.11□□□□□ -0.47
NOMO3-216ENST00000576460 ABCC1P33527 1531 aa12.11□□□□□ -0.47
NOMO3-216ENST00000576460 MAP3K4Q9Y6R4 1608 aa12.11□□□□□ -0.47
NOMO3-216ENST00000576460 CLSPNQ9HAW4 1339 aa12.11□□□□□ -0.47
NOMO3-216ENST00000576460 MAST1Q9Y2H9 1570 aa12.1□□□□□ -0.47
NOMO3-216ENST00000576460 ARHGEF12Q9NZN5 1544 aa12.1□□□□□ -0.47
NOMO3-216ENST00000576460 SCAPERQ9BY12 1400 aa12.1□□□□□ -0.47
NOMO3-216ENST00000576460 DIP2BQ9P265 1576 aa12.09□□□□□ -0.47
NOMO3-216ENST00000576460 NEO1Q92859 1461 aa12.09□□□□□ -0.47
NOMO3-216ENST00000576460 ADGRL1O94910 1474 aa12.08□□□□□ -0.47
NOMO3-216ENST00000576460 DHX57Q6P158 1386 aaKnown RBP12.08□□□□□ -0.48
NOMO3-216ENST00000576460 SPAG9O60271 1321 aaKnown RBP12.08□□□□□ -0.48
NOMO3-216ENST00000576460 KIF13AQ9H1H9 1805 aa12.07□□□□□ -0.48
NOMO3-216ENST00000576460 RTEL1-TNFRSF6BF6WH68 1400 aa12.07□□□□□ -0.48
NOMO3-216ENST00000576460 TSPOAP1O95153 1857 aa12.07□□□□□ -0.48
NOMO3-216ENST00000576460 TRAPPC8Q9Y2L5 1435 aa12.07□□□□□ -0.48
NOMO3-216ENST00000576460 AMER1Q5JTC6 1135 aaPredicted RBP12.06□□□□□ -0.48
NOMO3-216ENST00000576460 AFAP1Q8N556 730 aa12.06□□□□□ -0.48
NOMO3-216ENST00000576460 TRIM52Q96A61 297 aa12.06□□□□□ -0.48
NOMO3-216ENST00000576460 ANKRD50Q9ULJ7 1429 aa12.05□□□□□ -0.48
NOMO3-216ENST00000576460 KIF15Q9NS87 1388 aa12.05□□□□□ -0.48
NOMO3-216ENST00000576460 TEX14Q8IWB6 1497 aa12.04□□□□□ -0.48
NOMO3-216ENST00000576460 RTN4Q9NQC3 1192 aaKnown RBP12.04□□□□□ -0.48
NOMO3-216ENST00000576460 PLXNC1O60486 1568 aa12.04□□□□□ -0.48
NOMO3-216ENST00000576460 MYT1LQ9UL68 1186 aa12.03□□□□□ -0.48
NOMO3-216ENST00000576460 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.48
NOMO3-216ENST00000576460 ZNF518AQ6AHZ1 1483 aa12.02□□□□□ -0.48
NOMO3-216ENST00000576460 KDM6BO15054 1643 aa12.02□□□□□ -0.49
NOMO3-216ENST00000576460 DUOX2Q9NRD8 1548 aa12.01□□□□□ -0.49
NOMO3-216ENST00000576460 PPRC1Q5VV67 1664 aaKnown RBP12□□□□□ -0.49
NOMO3-216ENST00000576460 MPHOSPH9Q99550 1183 aa12□□□□□ -0.49
NOMO3-216ENST00000576460 POGZQ7Z3K3 1410 aa12□□□□□ -0.49
NOMO3-216ENST00000576460 ATP7AQ04656 1500 aa12□□□□□ -0.49
NOMO3-216ENST00000576460 MLH3Q9UHC1 1453 aa11.99□□□□□ -0.49
NOMO3-216ENST00000576460 KIDINS220Q9ULH0 1771 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms